| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692524
Identifier: 213692524
GI number: 213692524
Start: 1808884
End: 1809489
Strand: Reverse
Name: 213692524
Synonym: Blon_1656
Alternate gene names: NA
Gene position: 1809489-1808884 (Counterclockwise)
Preceding gene: 213692525
Following gene: 213692522
Centisome position: 63.88
GC content: 67.0
Gene sequence:
>606_bases ATGACGCGAGGGACGAATCCTTCGACCCCGGCACTGTCTGAGGCCGCCCGGTATCTGGCCATCCCCACCGGAATCGTCTC CACCGGGTTCGGCAAGGTCCGCACCATTACGGGCCGGCTCGGCATCCGGTTCGACCGGTGGCAGGAGGGCATAGGCCAGC TCATGCTCGCCAAGCGCTCCGACGGCGCGTACGCGGCTGGTGTGGGCGGCGTGGTCATGAGCATCTGCCGGCAGATGGGC AAGACGTTCACGGTCGGCAACGACCCCGGCGCCAGGCACATGGGCGAGACCGGGCAGCACGTGTGGGCCGCCAGGCTCGC CGCATGGCTCGACGGGCAGGAATGGGAACCCTACTTCCGCGTGCCCGTCAGCGTGCACGACGACCTGCTCGCGATCGACC CGGACGCGTACGTGAACCCCGGGATCATCACCGTGGACGGAGGACTGCTTCGCGTCAACGTCAGTCTCGTCGCCAGGAAC CCGACTATCAGGGCATCTCGTACGTCAACGCACTCCAGGTCGACCGCCGGTACGCCTCGGTGCTGGGCATGGGACGATAC CCGATGTCCTACCACGAGTACAACCAGAGCGTCACCGGCGACGTGA
Upstream 100 bases:
>100_bases ATCGCCGCGTTGACCAAGCAGATGCTCGCGGTCGGCAAGGAGATCAACGCGTTGGAGGAGGAGGCGCGGGCGGATCCGCT TGCGGAGGGAGTGAGGGCCG
Downstream 100 bases:
>100_bases CCGCGAAGATCATGGATCGCGTCGACCGGTGCTGGAAGATCGACGCGTACGGGAGGATCGCCATCGACCCCGGCGCCATA CGATACAACGAGGGATGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MTRGTNPSTPALSEAARYLAIPTGIVSTGFGKVRTITGRLGIRFDRWQEGIGQLMLAKRSDGAYAAGVGGVVMSICRQMG KTFTVGNDPGARHMGETGQHVWAARLAAWLDGQEWEPYFRVPVSVHDDLLAIDPDAYVNPGIITVDGGLLRVNVSLVARN PTIRASRTSTHSRSTAGTPRCWAWDDTRCPTTSTTRASPAT
Sequences:
>Translated_201_residues MTRGTNPSTPALSEAARYLAIPTGIVSTGFGKVRTITGRLGIRFDRWQEGIGQLMLAKRSDGAYAAGVGGVVMSICRQMG KTFTVGNDPGARHMGETGQHVWAARLAAWLDGQEWEPYFRVPVSVHDDLLAIDPDAYVNPGIITVDGGLLRVNVSLVARN PTIRASRTSTHSRSTAGTPRCWAWDDTRCPTTSTTRASPAT >Mature_200_residues TRGTNPSTPALSEAARYLAIPTGIVSTGFGKVRTITGRLGIRFDRWQEGIGQLMLAKRSDGAYAAGVGGVVMSICRQMGK TFTVGNDPGARHMGETGQHVWAARLAAWLDGQEWEPYFRVPVSVHDDLLAIDPDAYVNPGIITVDGGLLRVNVSLVARNP TIRASRTSTHSRSTAGTPRCWAWDDTRCPTTSTTRASPAT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21612; Mature: 21480
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRGTNPSTPALSEAARYLAIPTGIVSTGFGKVRTITGRLGIRFDRWQEGIGQLMLAKRS CCCCCCCCCCCHHHHHHEEECCCCHHHCCCCCEEEEECCCCEEEHHHHHHHHHEEEEECC DGAYAAGVGGVVMSICRQMGKTFTVGNDPGARHMGETGQHVWAARLAAWLDGQEWEPYFR CCCEECCHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEE VPVSVHDDLLAIDPDAYVNPGIITVDGGLLRVNVSLVARNPTIRASRTSTHSRSTAGTPR EEEECCCCEEEECCCCCCCCCEEEECCCEEEEEEEEEECCCCEEECCCCCCCCCCCCCCC CWAWDDTRCPTTSTTRASPAT EECCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TRGTNPSTPALSEAARYLAIPTGIVSTGFGKVRTITGRLGIRFDRWQEGIGQLMLAKRS CCCCCCCCCCHHHHHHEEECCCCHHHCCCCCEEEEECCCCEEEHHHHHHHHHEEEEECC DGAYAAGVGGVVMSICRQMGKTFTVGNDPGARHMGETGQHVWAARLAAWLDGQEWEPYFR CCCEECCHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEE VPVSVHDDLLAIDPDAYVNPGIITVDGGLLRVNVSLVARNPTIRASRTSTHSRSTAGTPR EEEECCCCEEEECCCCCCCCCEEEECCCEEEEEEEEEECCCCEEECCCCCCCCCCCCCCC CWAWDDTRCPTTSTTRASPAT EECCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA