Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is 213692497

Identifier: 213692497

GI number: 213692497

Start: 1777771

End: 1778301

Strand: Direct

Name: 213692497

Synonym: Blon_1626

Alternate gene names: NA

Gene position: 1777771-1778301 (Clockwise)

Preceding gene: 213692494

Following gene: 213692498

Centisome position: 62.76

GC content: 54.05

Gene sequence:

>531_bases
ATGGCAGAATCCGACAAACTCACCATTCCACGAACAATCCTTCCATCCATCAACATTGACGACATGACGACATTGGAGGC
ATTCACCGCACGATTTCTTGATGAGCAGATCTTCATCAAAGATGCCAGCGGCGTGGAGACTCCCCTACCTTCGCAGCTTT
GCGACGCCGTTAGGCAGACGGCCATCCTTCTCGCCGAAGGCAAAAGTGTAATGATCAGTGCCACCGAACAAGATCTGACT
ACCGAACAGGCGGCGGCAATGCTCGGCATTTCGCGGCAAACACTGATAAGACTGCTTGATAAAGGACTTATTCCTTTTTC
ACGTCCGTCCAATCACCGTCGCATCCGGCTGGAAGACCTGCTTGAATACAAGCGAGCCTCGAAACACACCAAGGATTGCG
CCCTGAGCCAAATGATCGGCGTCGGGGAAGACGCCGAATTGTACGACCTGCCCGAGCCGACCCCGCAGGAAGCCATGCAT
GCGGTATCGGAGGTAAGGAGAGTACGGGCCGATGCTGTCGGTGTTTCTTGA

Upstream 100 bases:

>100_bases
AAAAACTCGATAACCATCGTCAATTCGCATAATTTGAACGTTTTAGGTGTTTTGGTCGCTTTGGACGTTTTATACTGTGA
TAGATAAAAAGGAGGTCACC

Downstream 100 bases:

>100_bases
TGCCAATGTCATCTATTCCATCACCTTGACCGATGTTCTGCTCACCTTGGCCGAGCATGACCTTTTTCTTCCCCTGTGGT
CGCCTAACGTATTACAAGAA

Product: DNA binding domain, excisionase family

Products: NA

Alternate protein names: Excisionase Domain-Containing Protein; Excisionase/Xis

Number of amino acids: Translated: 176; Mature: 175

Protein sequence:

>176_residues
MAESDKLTIPRTILPSINIDDMTTLEAFTARFLDEQIFIKDASGVETPLPSQLCDAVRQTAILLAEGKSVMISATEQDLT
TEQAAAMLGISRQTLIRLLDKGLIPFSRPSNHRRIRLEDLLEYKRASKHTKDCALSQMIGVGEDAELYDLPEPTPQEAMH
AVSEVRRVRADAVGVS

Sequences:

>Translated_176_residues
MAESDKLTIPRTILPSINIDDMTTLEAFTARFLDEQIFIKDASGVETPLPSQLCDAVRQTAILLAEGKSVMISATEQDLT
TEQAAAMLGISRQTLIRLLDKGLIPFSRPSNHRRIRLEDLLEYKRASKHTKDCALSQMIGVGEDAELYDLPEPTPQEAMH
AVSEVRRVRADAVGVS
>Mature_175_residues
AESDKLTIPRTILPSINIDDMTTLEAFTARFLDEQIFIKDASGVETPLPSQLCDAVRQTAILLAEGKSVMISATEQDLTT
EQAAAMLGISRQTLIRLLDKGLIPFSRPSNHRRIRLEDLLEYKRASKHTKDCALSQMIGVGEDAELYDLPEPTPQEAMHA
VSEVRRVRADAVGVS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19449; Mature: 19317

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAESDKLTIPRTILPSINIDDMTTLEAFTARFLDEQIFIKDASGVETPLPSQLCDAVRQT
CCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHH
AILLAEGKSVMISATEQDLTTEQAAAMLGISRQTLIRLLDKGLIPFSRPSNHRRIRLEDL
HHHHCCCCEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCEEEHHHH
LEYKRASKHTKDCALSQMIGVGEDAELYDLPEPTPQEAMHAVSEVRRVRADAVGVS
HHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AESDKLTIPRTILPSINIDDMTTLEAFTARFLDEQIFIKDASGVETPLPSQLCDAVRQT
CCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHH
AILLAEGKSVMISATEQDLTTEQAAAMLGISRQTLIRLLDKGLIPFSRPSNHRRIRLEDL
HHHHCCCCEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCEEEHHHH
LEYKRASKHTKDCALSQMIGVGEDAELYDLPEPTPQEAMHAVSEVRRVRADAVGVS
HHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA