| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is yozG [H]
Identifier: 213692490
GI number: 213692490
Start: 1771696
End: 1771905
Strand: Reverse
Name: yozG [H]
Synonym: Blon_1619
Alternate gene names: 213692490
Gene position: 1771905-1771696 (Counterclockwise)
Preceding gene: 213692492
Following gene: 213692487
Centisome position: 62.55
GC content: 56.19
Gene sequence:
>210_bases ATGACGATTCGCATCAATCTCGACGTCATGATGGCCAAACGCAAGATTGGCGTCGGCGAGCTCGCCGAACAAATTGGCAT CACGCCCGCCAACGTGTCCATTCTGAAGAACGGACGTGCCAAAGCCGTCCGCTTCACCACGTTGGACGCCATCTGCAAGG CGCTCGACTGTCAACCCGGAGACATCCTCGAATGGGAAGATGTCGATTGA
Upstream 100 bases:
>100_bases GGGCGTGCTGTTCCTGCTCTGCATCGAAGCGGCGTTCGTGGCCGTATGGAAACTGTTCTCCTTGTCCGGCTCGGGAGCGA ACTCGAGCAGGTGATTTGAG
Downstream 100 bases:
>100_bases TCGACACGCCACCGGCTCGAACTCATGGTTCAACTTGTAGTCTCTCTCAAAATCAATGATGCCCTATCATCCTGCAAGAC GATAGGGCATCATCATGTGA
Product: helix-turn-helix domain protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 69; Mature: 68
Protein sequence:
>69_residues MTIRINLDVMMAKRKIGVGELAEQIGITPANVSILKNGRAKAVRFTTLDAICKALDCQPGDILEWEDVD
Sequences:
>Translated_69_residues MTIRINLDVMMAKRKIGVGELAEQIGITPANVSILKNGRAKAVRFTTLDAICKALDCQPGDILEWEDVD >Mature_68_residues TIRINLDVMMAKRKIGVGELAEQIGITPANVSILKNGRAKAVRFTTLDAICKALDCQPGDILEWEDVD
Specific function: Unknown
COG id: COG3655
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001387 - InterPro: IPR010982 [H]
Pfam domain/function: PF01381 HTH_3 [H]
EC number: NA
Molecular weight: Translated: 7571; Mature: 7440
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIRINLDVMMAKRKIGVGELAEQIGITPANVSILKNGRAKAVRFTTLDAICKALDCQPG CEEEEEEEEEEECCCCCHHHHHHHHCCCCCCEEEEECCCCEEEEEEHHHHHHHHHCCCCC DILEWEDVD CCCCCCCCC >Mature Secondary Structure TIRINLDVMMAKRKIGVGELAEQIGITPANVSILKNGRAKAVRFTTLDAICKALDCQPG EEEEEEEEEEECCCCCHHHHHHHHCCCCCCEEEEECCCCEEEEEEHHHHHHHHHCCCCC DILEWEDVD CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]