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The map label for this gene is yqgF [C]

Identifier: 213692472

GI number: 213692472

Start: 1754609

End: 1755064

Strand: Reverse

Name: yqgF [C]

Synonym: Blon_1601

Alternate gene names: 213692472

Gene position: 1755064-1754609 (Counterclockwise)

Preceding gene: 213692473

Following gene: 213692471

Centisome position: 61.96

GC content: 53.95

Gene sequence:

>456_bases
GTGGTGTGGTTAGGCGTTGATTTGGGTAATGCCCGGGTCGGACTGGCACTGTCCGACCCGGAGCTTACCTTTGCACACCC
TGCTGGCAACATTCATGTTGCCGGCGACTATTTCTTTGCTATTGACGAGGTCCTGAACGTCATCGAAGACGAACATGTGG
ACCATGTAATCGTCGGATTGCCCCTGCAGATGGACGGTACAGAAGGCAAAAGCGCCAAAAAAGCGCGCAGGTGGGCGGCC
AATCTGGAGAAGAGGCTGCAAGCAGAGAGTGAAGACAGTGATTCTACGGAGTATCAGATTCCGCAGGTGTCATTGATAGA
TGAGAGATTAACAACAGTCAGTGCGCATCGTCAACTGTTCGAGGCCCATAAAGCTTCGAACAAGCACAGGCCGGTGGTTG
ACCAGCAGTCGGCAGTGGTGATTTTGCAGACGGCACTCGACCGTACCCGGGAGTAG

Upstream 100 bases:

>100_bases
GCAAGCCGGACTTCGCCCAGGGTGGCGGTGTCGATGCCTCCAAGATCGGCGAGGCCCTCGAAGCGCTCAAGCACGAGGCG
CAGAAAGCCTGATTCCGCCA

Downstream 100 bases:

>100_bases
TGAGGTATCGGTTATGACCGATGATTTTAACGAGTTCTTTGATGACAACACGCATTGGGTCGAACAGGGGTCAGAACCAA
TGCGCGGGGCCAAGCCGCCA

Product: Holliday junction resolvase YqgF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MVWLGVDLGNARVGLALSDPELTFAHPAGNIHVAGDYFFAIDEVLNVIEDEHVDHVIVGLPLQMDGTEGKSAKKARRWAA
NLEKRLQAESEDSDSTEYQIPQVSLIDERLTTVSAHRQLFEAHKASNKHRPVVDQQSAVVILQTALDRTRE

Sequences:

>Translated_151_residues
MVWLGVDLGNARVGLALSDPELTFAHPAGNIHVAGDYFFAIDEVLNVIEDEHVDHVIVGLPLQMDGTEGKSAKKARRWAA
NLEKRLQAESEDSDSTEYQIPQVSLIDERLTTVSAHRQLFEAHKASNKHRPVVDQQSAVVILQTALDRTRE
>Mature_151_residues
MVWLGVDLGNARVGLALSDPELTFAHPAGNIHVAGDYFFAIDEVLNVIEDEHVDHVIVGLPLQMDGTEGKSAKKARRWAA
NLEKRLQAESEDSDSTEYQIPQVSLIDERLTTVSAHRQLFEAHKASNKHRPVVDQQSAVVILQTALDRTRE

Specific function: Could be a nuclease that resolves Holliday junction intermediates in genetic recombination

COG id: COG0816

COG function: function code L; Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis)

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yqgF HJR family

Homologues:

Organism=Escherichia coli, GI1789318, Length=147, Percent_Identity=33.3333333333333, Blast_Score=64, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RUVX_BIFLD (B3DSE2)

Other databases:

- EMBL:   CP000605
- RefSeq:   YP_001954559.1
- ProteinModelPortal:   B3DSE2
- SMR:   B3DSE2
- GeneID:   6363861
- GenomeReviews:   CP000605_GR
- KEGG:   blj:BLD_0615
- HOGENOM:   HBG607919
- OMA:   GRSVIDQ
- ProtClustDB:   CLSK572805
- GO:   GO:0005737
- HAMAP:   MF_00651
- InterPro:   IPR005227
- InterPro:   IPR006641
- InterPro:   IPR012337
- Gene3D:   G3DSA:3.30.420.140
- SMART:   SM00732
- TIGRFAMs:   TIGR00250

Pfam domain/function: PF03652 UPF0081; SSF53098 RNaseH_fold

EC number: NA

Molecular weight: Translated: 16776; Mature: 16776

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVWLGVDLGNARVGLALSDPELTFAHPAGNIHVAGDYFFAIDEVLNVIEDEHVDHVIVGL
CEEEEEECCCCEEEEEECCCCEEEECCCCCEEECCHHHHHHHHHHHHHHHCCCCEEEEEE
PLQMDGTEGKSAKKARRWAANLEKRLQAESEDSDSTEYQIPQVSLIDERLTTVSAHRQLF
EEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHH
EAHKASNKHRPVVDQQSAVVILQTALDRTRE
HHHHCCCCCCCCCCCCCCEEEEEHHHHHCCC
>Mature Secondary Structure
MVWLGVDLGNARVGLALSDPELTFAHPAGNIHVAGDYFFAIDEVLNVIEDEHVDHVIVGL
CEEEEEECCCCEEEEEECCCCEEEECCCCCEEECCHHHHHHHHHHHHHHHCCCCEEEEEE
PLQMDGTEGKSAKKARRWAANLEKRLQAESEDSDSTEYQIPQVSLIDERLTTVSAHRQLF
EEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHH
EAHKASNKHRPVVDQQSAVVILQTALDRTRE
HHHHCCCCCCCCCCCCCCEEEEEHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA