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The map label for this gene is sufD [C]

Identifier: 213692464

GI number: 213692464

Start: 1744349

End: 1745584

Strand: Reverse

Name: sufD [C]

Synonym: Blon_1593

Alternate gene names: 213692464

Gene position: 1745584-1744349 (Counterclockwise)

Preceding gene: 213692465

Following gene: 213692463

Centisome position: 61.62

GC content: 63.03

Gene sequence:

>1236_bases
ATGACCGACAACACAACACCCGTCAAGGAAATCAAGATTCCGGTCGCCGACCCCAACGACCCGTACGCGATTCCGGCCGC
CATGCCGTCCTCCGTGGACCATGCCGTGCGTTCGTTCAACGCAGGCGACTACCCGGAGCCCAGCCGCAAGCAGGACGAAT
GGCGCTACACGCCTATCGAGCGCATCAACGAGTTCTTCACCGTGTTCAAGCCTTCCGGCGAAACGCAGATCGAAGTCTCC
ATGATTGACGGCTCGCCGTTGGCCGAAGGCGTGAAGCTCAGCCAGATCAAGCTCGGTGAGGGCCTGTCCGGCACTGTGTC
CAAGCCCAACGACCGCGTCTCCGCAGTCGAATGGGAATCCGGCCACACCGCAACCATTCTGGAACTGTCCGGTGAGATCG
CCCAGCCCGTGCTCGTCAAGGTGCACGGCGCGGGGGAGGACCTCGACGCTTTCCATCTGGTGATCGCCGCCGCCGACAAG
GCTCATGCGGACGTCGTCGTGGAACACAACGGTGACGCACGACTGGCCGAAGGCGTGGAAATCACCACCGGCAAGGACTC
GCACGTCTCCACCACGTTCGTTCAGGAATGGGCCAAAACCGCCAAGCATGTGGCCAACCACCGCATCCACGTCGGCGAAG
GCGCATCCCTGCGCCACTCCGTCGTGACCTTGGGCGGCGACATCGTCCGCATCCGCATGGATCAGGACTTCGGCGGCGAA
CAAGGCGACCTCAACATGCTCGGCATCTACTTCGTGGACCCCGGCGAGCACATCGAACACCGCACGATGGTGGTACACAA
CCACCCCGACTGCAAGTCCCGCGTGGTCTACAAGGGCGCGCTTGACGGCAAGGGCGCGCACTCCACTTGGGTGGGCAACG
CGCTCATCCAGCCCACCGCCCCCGGCACCGACTCCTACGAGCTCAACCGCAACCTGGTCCTGACCCCGGGTGCCATCGCC
GATTCCGAGCCGAACCTCGAAATCGAAAACGGCAACATCATCGGTGCCGGTCACGCCTCTTCGGTGGGCCGCTTCGACGA
CGAGGAACTGTTCTACCTCGAATCCCGCGGCATCCCCGAAACCGACGCCCGCAAGCTCGTGGTGCGTGGCTTCTTCGGCG
AACTCGTCGAGGAGATCGGCATTCCTGCCATCTCCGAACATCTGATGACCGTGATTGACCGCCGACTGGCCCGTGGCGAA
AACGACGCCATGGCACAGGTCCTCGAAGACAAGTAA

Upstream 100 bases:

>100_bases
GCTTCGTCGAACCGATCAGCCGCGAGCTGCCGATGGAATACGCGCTTGAACTCAACAGACTTGTGGAACTTCAGATGGAA
GGATCGGTGGGCTGATTCCG

Downstream 100 bases:

>100_bases
GAACAGCATTTTTAGGAGCACAACAATGTCAACACTCGAAATCAAGGACCTGCACGTCCACGTCGAAACCAAGGAAGGCA
TCAAGCCGATCCTGAAGGGT

Product: FeS assembly protein SufD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 411; Mature: 410

Protein sequence:

>411_residues
MTDNTTPVKEIKIPVADPNDPYAIPAAMPSSVDHAVRSFNAGDYPEPSRKQDEWRYTPIERINEFFTVFKPSGETQIEVS
MIDGSPLAEGVKLSQIKLGEGLSGTVSKPNDRVSAVEWESGHTATILELSGEIAQPVLVKVHGAGEDLDAFHLVIAAADK
AHADVVVEHNGDARLAEGVEITTGKDSHVSTTFVQEWAKTAKHVANHRIHVGEGASLRHSVVTLGGDIVRIRMDQDFGGE
QGDLNMLGIYFVDPGEHIEHRTMVVHNHPDCKSRVVYKGALDGKGAHSTWVGNALIQPTAPGTDSYELNRNLVLTPGAIA
DSEPNLEIENGNIIGAGHASSVGRFDDEELFYLESRGIPETDARKLVVRGFFGELVEEIGIPAISEHLMTVIDRRLARGE
NDAMAQVLEDK

Sequences:

>Translated_411_residues
MTDNTTPVKEIKIPVADPNDPYAIPAAMPSSVDHAVRSFNAGDYPEPSRKQDEWRYTPIERINEFFTVFKPSGETQIEVS
MIDGSPLAEGVKLSQIKLGEGLSGTVSKPNDRVSAVEWESGHTATILELSGEIAQPVLVKVHGAGEDLDAFHLVIAAADK
AHADVVVEHNGDARLAEGVEITTGKDSHVSTTFVQEWAKTAKHVANHRIHVGEGASLRHSVVTLGGDIVRIRMDQDFGGE
QGDLNMLGIYFVDPGEHIEHRTMVVHNHPDCKSRVVYKGALDGKGAHSTWVGNALIQPTAPGTDSYELNRNLVLTPGAIA
DSEPNLEIENGNIIGAGHASSVGRFDDEELFYLESRGIPETDARKLVVRGFFGELVEEIGIPAISEHLMTVIDRRLARGE
NDAMAQVLEDK
>Mature_410_residues
TDNTTPVKEIKIPVADPNDPYAIPAAMPSSVDHAVRSFNAGDYPEPSRKQDEWRYTPIERINEFFTVFKPSGETQIEVSM
IDGSPLAEGVKLSQIKLGEGLSGTVSKPNDRVSAVEWESGHTATILELSGEIAQPVLVKVHGAGEDLDAFHLVIAAADKA
HADVVVEHNGDARLAEGVEITTGKDSHVSTTFVQEWAKTAKHVANHRIHVGEGASLRHSVVTLGGDIVRIRMDQDFGGEQ
GDLNMLGIYFVDPGEHIEHRTMVVHNHPDCKSRVVYKGALDGKGAHSTWVGNALIQPTAPGTDSYELNRNLVLTPGAIAD
SEPNLEIENGNIIGAGHASSVGRFDDEELFYLESRGIPETDARKLVVRGFFGELVEEIGIPAISEHLMTVIDRRLARGEN
DAMAQVLEDK

Specific function: FhuF function [C]

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI1787971, Length=395, Percent_Identity=27.0886075949367, Blast_Score=104, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000825
- InterPro:   IPR011542 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 44605; Mature: 44474

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDNTTPVKEIKIPVADPNDPYAIPAAMPSSVDHAVRSFNAGDYPEPSRKQDEWRYTPIE
CCCCCCCCEEEEEECCCCCCCEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHH
RINEFFTVFKPSGETQIEVSMIDGSPLAEGVKLSQIKLGEGLSGTVSKPNDRVSAVEWES
HHHHHEEEECCCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECC
GHTATILELSGEIAQPVLVKVHGAGEDLDAFHLVIAAADKAHADVVVEHNGDARLAEGVE
CCEEEEEEECCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCEEEEEECCCCEECCCEE
ITTGKDSHVSTTFVQEWAKTAKHVANHRIHVGEGASLRHSVVTLGGDIVRIRMDQDFGGE
EECCCCCCCHHHHHHHHHHHHHHHHHCEEEECCCCCCEEEEEEECCEEEEEEECCCCCCC
QGDLNMLGIYFVDPGEHIEHRTMVVHNHPDCKSRVVYKGALDGKGAHSTWVGNALIQPTA
CCCEEEEEEEEECCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCEECCCEEECCCC
PGTDSYELNRNLVLTPGAIADSEPNLEIENGNIIGAGHASSVGRFDDEELFYLESRGIPE
CCCCCEECCCCEEECCCCCCCCCCCEEEECCCEEECCCCCCCCCCCCCEEEEEECCCCCC
TDARKLVVRGFFGELVEEIGIPAISEHLMTVIDRRLARGENDAMAQVLEDK
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCC
>Mature Secondary Structure 
TDNTTPVKEIKIPVADPNDPYAIPAAMPSSVDHAVRSFNAGDYPEPSRKQDEWRYTPIE
CCCCCCCEEEEEECCCCCCCEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHH
RINEFFTVFKPSGETQIEVSMIDGSPLAEGVKLSQIKLGEGLSGTVSKPNDRVSAVEWES
HHHHHEEEECCCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECC
GHTATILELSGEIAQPVLVKVHGAGEDLDAFHLVIAAADKAHADVVVEHNGDARLAEGVE
CCEEEEEEECCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCEEEEEECCCCEECCCEE
ITTGKDSHVSTTFVQEWAKTAKHVANHRIHVGEGASLRHSVVTLGGDIVRIRMDQDFGGE
EECCCCCCCHHHHHHHHHHHHHHHHHCEEEECCCCCCEEEEEEECCEEEEEEECCCCCCC
QGDLNMLGIYFVDPGEHIEHRTMVVHNHPDCKSRVVYKGALDGKGAHSTWVGNALIQPTA
CCCEEEEEEEEECCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCEECCCEEECCCC
PGTDSYELNRNLVLTPGAIADSEPNLEIENGNIIGAGHASSVGRFDDEELFYLESRGIPE
CCCCCEECCCCEEECCCCCCCCCCCEEEECCCEEECCCCCCCCCCCCCEEEEEECCCCCC
TDARKLVVRGFFGELVEEIGIPAISEHLMTVIDRRLARGENDAMAQVLEDK
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]