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The map label for this gene is yjfH [C]

Identifier: 213692458

GI number: 213692458

Start: 1738552

End: 1739430

Strand: Direct

Name: yjfH [C]

Synonym: Blon_1587

Alternate gene names: 213692458

Gene position: 1738552-1739430 (Clockwise)

Preceding gene: 213692451

Following gene: 213692459

Centisome position: 61.37

GC content: 62.0

Gene sequence:

>879_bases
ATGCAGTTCATCACGCTGGACACCGTTGACGACCCGCGCGTCGAAGCGTATGTGAGCCTCACCGAAATGCAGTTGCGCAA
TCGCTTGGAACCAGCCAAGGGCGTGTTCATCGCCGAGTCCCCCAAAGTCATCGACCGCGCGCTGGCCGCTGACCGCGAAC
CGCTGTCACTGCTGGTCGAGGAACCTTGGCTGGAGGGCATGAAAGACACCTTCGACTTCATCGACGGGCGCTGGGGCGCG
GATATTCCCGTCTACGTGGCCTCACCTGAGCAGCTCAAGCGTCTGACCGGCTACCGTTTGCATCGCGGCGCCCTATGCGC
GATGCGACGCTGGCTGCTGCCCTCCGTAGCCGAGGTCTGCAGGAGCGCCCGCCGCGTGGCAGTAATGGAAAACATCGTGG
ACCACACCAATGTGGGCGCACTGATGCGTTCGGCGGCCGCGCTCGATGTGGATGCCGTGCTGGTCACGCCCTCCTGCGGT
GATCCGCTGTACCGACGAGCCGCTCGTGTGTCGATGGGCACCGTATTCCAGATTCCGTGGACCCGTATCACCGGGTTCAA
CGACGACGGTACCGAAAACAAGCATTACTGGCCGTTCCAGGGCATCGACGAGTTGAAGTCGCTGGGCTTCACCACTGTGG
CCATGGCATTGGAGGATCGTTCGATTTCGTTGGACGAACTGACACGCCGTCTGCACGCGCCTGACGAAGATCCGACGCAT
ATCGACAAGCTCGCGCTGATCTTCGGCACCGAGGGCGACGGCCTGTCCCACCATACGATTGCCCGCGCCGATTTGACCGT
GAAGATTCCGATGAGCCACGGCGTGGATAGTCTGAACGTGGCGGCATCCAGCGCAGTGGCGTTCTACGCGACACGCTAA

Upstream 100 bases:

>100_bases
ATTTTATACGGGCGTACGGGTTCAAGTCCCGTCTCGGGCACAGATAAACCCCTTGCATTGCAAGGGGTTTTTCGTTATCT
GCACACACGAAAGGCCACCA

Downstream 100 bases:

>100_bases
GGAATCGCACGCGCCCCTAAAAGGCCGAATCCTTAACAAATCTACGAAACTGTTCATCGCAAGTTCACGGCACGCGGGTG
GCAAAAGCCTTGCATGTTCG

Product: tRNA/rRNA methyltransferase (SpoU)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MQFITLDTVDDPRVEAYVSLTEMQLRNRLEPAKGVFIAESPKVIDRALAADREPLSLLVEEPWLEGMKDTFDFIDGRWGA
DIPVYVASPEQLKRLTGYRLHRGALCAMRRWLLPSVAEVCRSARRVAVMENIVDHTNVGALMRSAAALDVDAVLVTPSCG
DPLYRRAARVSMGTVFQIPWTRITGFNDDGTENKHYWPFQGIDELKSLGFTTVAMALEDRSISLDELTRRLHAPDEDPTH
IDKLALIFGTEGDGLSHHTIARADLTVKIPMSHGVDSLNVAASSAVAFYATR

Sequences:

>Translated_292_residues
MQFITLDTVDDPRVEAYVSLTEMQLRNRLEPAKGVFIAESPKVIDRALAADREPLSLLVEEPWLEGMKDTFDFIDGRWGA
DIPVYVASPEQLKRLTGYRLHRGALCAMRRWLLPSVAEVCRSARRVAVMENIVDHTNVGALMRSAAALDVDAVLVTPSCG
DPLYRRAARVSMGTVFQIPWTRITGFNDDGTENKHYWPFQGIDELKSLGFTTVAMALEDRSISLDELTRRLHAPDEDPTH
IDKLALIFGTEGDGLSHHTIARADLTVKIPMSHGVDSLNVAASSAVAFYATR
>Mature_292_residues
MQFITLDTVDDPRVEAYVSLTEMQLRNRLEPAKGVFIAESPKVIDRALAADREPLSLLVEEPWLEGMKDTFDFIDGRWGA
DIPVYVASPEQLKRLTGYRLHRGALCAMRRWLLPSVAEVCRSARRVAVMENIVDHTNVGALMRSAAALDVDAVLVTPSCG
DPLYRRAARVSMGTVFQIPWTRITGFNDDGTENKHYWPFQGIDELKSLGFTTVAMALEDRSISLDELTRRLHAPDEDPTH
IDKLALIFGTEGDGLSHHTIARADLTVKIPMSHGVDSLNVAASSAVAFYATR

Specific function: Unknown

COG id: COG0566

COG function: function code J; rRNA methylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RNA methyltransferase TrmH family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001537 [H]

Pfam domain/function: PF00588 SpoU_methylase [H]

EC number: 2.1.1.- [C]

Molecular weight: Translated: 32433; Mature: 32433

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFITLDTVDDPRVEAYVSLTEMQLRNRLEPAKGVFIAESPKVIDRALAADREPLSLLVE
CEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHCCEEEECCCHHHHHHHHCCCCCHHHHHH
EPWLEGMKDTFDFIDGRWGADIPVYVASPEQLKRLTGYRLHRGALCAMRRWLLPSVAEVC
CHHHHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
RSARRVAVMENIVDHTNVGALMRSAAALDVDAVLVTPSCGDPLYRRAARVSMGTVFQIPW
HHHHHHHHHHHHHHHCHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHCCCEEEECCC
TRITGFNDDGTENKHYWPFQGIDELKSLGFTTVAMALEDRSISLDELTRRLHAPDEDPTH
EEEECCCCCCCCCCCCCCCCCHHHHHHCCHHEEEEECCCCCCCHHHHHHHHCCCCCCCCH
IDKLALIFGTEGDGLSHHTIARADLTVKIPMSHGVDSLNVAASSAVAFYATR
HHEEEEEEECCCCCCCCCEEEEECEEEEEECCCCCCCHHHHHCCEEEEEEEC
>Mature Secondary Structure
MQFITLDTVDDPRVEAYVSLTEMQLRNRLEPAKGVFIAESPKVIDRALAADREPLSLLVE
CEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHCCEEEECCCHHHHHHHHCCCCCHHHHHH
EPWLEGMKDTFDFIDGRWGADIPVYVASPEQLKRLTGYRLHRGALCAMRRWLLPSVAEVC
CHHHHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
RSARRVAVMENIVDHTNVGALMRSAAALDVDAVLVTPSCGDPLYRRAARVSMGTVFQIPW
HHHHHHHHHHHHHHHCHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHCCCEEEECCC
TRITGFNDDGTENKHYWPFQGIDELKSLGFTTVAMALEDRSISLDELTRRLHAPDEDPTH
EEEECCCCCCCCCCCCCCCCCHHHHHHCCHHEEEEECCCCCCCHHHHHHHHCCCCCCCCH
IDKLALIFGTEGDGLSHHTIARADLTVKIPMSHGVDSLNVAASSAVAFYATR
HHEEEEEEECCCCCCCCCEEEEECEEEEEECCCCCCCHHHHHCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]