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The map label for this gene is ybeY [C]

Identifier: 213692454

GI number: 213692454

Start: 1735392

End: 1735940

Strand: Reverse

Name: ybeY [C]

Synonym: Blon_1583

Alternate gene names: 213692454

Gene position: 1735940-1735392 (Counterclockwise)

Preceding gene: 213692455

Following gene: 213692453

Centisome position: 61.28

GC content: 62.66

Gene sequence:

>549_bases
ATGAGCGTTGACGTCACCAATGAAACCCAGTGGGTCATCGACCCCAAGGTCTTCTCCGATTTGGGTATTTGGGTACTCGA
CCAGATGCGCGTGAGCACCCAGTCCGACCTGACCATCATGTTCGTGGATCCCAATCCCATCGCCGAATTGCACATGCGTT
GGATGAACCTCGAAGGTCCGACCGACGTGATGAGCTTCCCGATGGACGAGCTGCGCCCAGGCGACGGCAAAACCGTGATG
GAAGGAGTGCTCGGCGACATCGTCATCTGCCCGTGGGTCGCTGCCCAACAGGCTGCCGCAGCCGGGCACAGCACCATGCA
GGAGATGCTATTGCTCACCATCCACGGCATCCTGCACCTGCTCGGCTACGACCACGTGACCCCCGAGCAGGAGCGCCAGA
TGTTCGGCCTGCAGCGACAGCTGCTGCTCACCTTCTTCGCCCTGCGCCACGATGCCAACGTGCAGGCCACGCTGCCCGCC
GGCACACCCGACGCGCTGGCCCTGTACGACGCCGCGCACGGTGCTGGCCGCGACCTCGATTCCAAATAA

Upstream 100 bases:

>100_bases
GCCGGCGACCACCGCGACATCGAACGCAAGGGCCGCCGCAACCATACCGACTTCGATGCCCGCCAGCAAGCGGATTCAAC
CAACCAAAGTGAGACAGACG

Downstream 100 bases:

>100_bases
ACTTCCAAATCAATCACACCAAATTCGGATTATTCTCTACCGTTCAAGGACATTCAAGGACACCGAAAAATCATTATGGA
GTATTCCAGTACCACGCTGA

Product: metalloprotease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 181

Protein sequence:

>182_residues
MSVDVTNETQWVIDPKVFSDLGIWVLDQMRVSTQSDLTIMFVDPNPIAELHMRWMNLEGPTDVMSFPMDELRPGDGKTVM
EGVLGDIVICPWVAAQQAAAAGHSTMQEMLLLTIHGILHLLGYDHVTPEQERQMFGLQRQLLLTFFALRHDANVQATLPA
GTPDALALYDAAHGAGRDLDSK

Sequences:

>Translated_182_residues
MSVDVTNETQWVIDPKVFSDLGIWVLDQMRVSTQSDLTIMFVDPNPIAELHMRWMNLEGPTDVMSFPMDELRPGDGKTVM
EGVLGDIVICPWVAAQQAAAAGHSTMQEMLLLTIHGILHLLGYDHVTPEQERQMFGLQRQLLLTFFALRHDANVQATLPA
GTPDALALYDAAHGAGRDLDSK
>Mature_181_residues
SVDVTNETQWVIDPKVFSDLGIWVLDQMRVSTQSDLTIMFVDPNPIAELHMRWMNLEGPTDVMSFPMDELRPGDGKTVME
GVLGDIVICPWVAAQQAAAAGHSTMQEMLLLTIHGILHLLGYDHVTPEQERQMFGLQRQLLLTFFALRHDANVQATLPAG
TPDALALYDAAHGAGRDLDSK

Specific function: Involved in rRNA and/or ribosome maturation and assembly. Required for normal 5' and 3' processing of 16S, 23S and 5S rRNAs. May have metal-dependent hydrolase activity [H]

COG id: COG0319

COG function: function code R; Predicted metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rRNA maturation factor YbeY family [H]

Homologues:

Organism=Escherichia coli, GI1786880, Length=113, Percent_Identity=34.5132743362832, Blast_Score=61, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023091
- InterPro:   IPR020549
- InterPro:   IPR002036 [H]

Pfam domain/function: PF02130 UPF0054 [H]

EC number: NA

Molecular weight: Translated: 20152; Mature: 20021

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: PS01306 UPF0054

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVDVTNETQWVIDPKVFSDLGIWVLDQMRVSTQSDLTIMFVDPNPIAELHMRWMNLEGP
CCCCCCCCCEEEECHHHHHHCCHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHCCCCC
TDVMSFPMDELRPGDGKTVMEGVLGDIVICPWVAAQQAAAAGHSTMQEMLLLTIHGILHL
HHHHHCCHHHCCCCCCHHHHHHHHHHEECCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHH
LGYDHVTPEQERQMFGLQRQLLLTFFALRHDANVQATLPAGTPDALALYDAAHGAGRDLD
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEHHHCCCCCCCCCC
SK
CC
>Mature Secondary Structure 
SVDVTNETQWVIDPKVFSDLGIWVLDQMRVSTQSDLTIMFVDPNPIAELHMRWMNLEGP
CCCCCCCCEEEECHHHHHHCCHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHCCCCC
TDVMSFPMDELRPGDGKTVMEGVLGDIVICPWVAAQQAAAAGHSTMQEMLLLTIHGILHL
HHHHHCCHHHCCCCCCHHHHHHHHHHEECCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHH
LGYDHVTPEQERQMFGLQRQLLLTFFALRHDANVQATLPAGTPDALALYDAAHGAGRDLD
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEHHHCCCCCCCCCC
SK
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA