| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is mltD [C]
Identifier: 213692442
GI number: 213692442
Start: 1720669
End: 1721901
Strand: Direct
Name: mltD [C]
Synonym: Blon_1571
Alternate gene names: 213692442
Gene position: 1720669-1721901 (Clockwise)
Preceding gene: 213692441
Following gene: 213692443
Centisome position: 60.74
GC content: 68.78
Gene sequence:
>1233_bases ATGGGCAGATTCAAAAACAGAAGCAAGCCGCTGCAGGCCCTCATCGCGGCACTGTTCGCCGTGCTGCTCGCGTGCACGCC GGCGATCGCGATGGCCGACATGGTCGGCATCGACGTGTCCGGCTGGCAGGGCTCGAACGTGACCTGCACCGCCAGCTACG ACTTCGCCGTAGTCAAGGTGTCCCAGGGCGTAGGCTTCGAGAACTCCAGTTGGCGCACGCAGGCCAAGTGCGTGACAGAC CGGGGCAAGAGCCTCGGCCTGTACCACTACGCCGGCGGCAACAACGCCGAGGCCGAGGCCGACTACTTCGTCGGCCGGGC GCGCGACTACATCGGCAGGGCCGTGCTCGTGCTCGACTGGGAGTCCTATCAGAACGCCCAGTGGGGCAATTCCGACTGGG TTCGCCGGTTCGTCCAGCGCGTGCACACGCTCACCGGCGTATGGCCGATGGTGTACGTGCAGGCCAGCGCGCTGGGCCAG ATACCCGGCGACGTGCGCGCCAACTGCGGCCTGTGGGTCGCCCAGTACGCCAGCAACGCGCCCACCGGCTACCAGAGCCG ACCGTGGAACTACGCGGTCTACGGCGAGGCCATGCGCCAGTACACCTCCAACGGCTGGATCAGCGGCTACAACGGGCCGC TCGACCTCAACTACTTCAGAGGCGACGCAAGCCAGTGGCAGGCCTACGCCAACCCCGCCGACGCAGCCAAGCCCGCAACC CCGCCGCAGACCGAGAAGCCGCCGACCCAGACCATCGACCTACAGGCACTCGCGACCGCCACCATCCGTGGCGACTACGG CAACGGCCAGCAGCGGCGCGACGCGCTCGGCGCGAACTACGACAAGGTCATGGCGATCGTCAACCAGCGCCTCGCCGGCA CCGCGACCGTAGCGCCGCAGCAGGCCGCGCAGGCCAACACGACCCGCGTGGCCGTCCGCTCCGGCGACACCATGAGCGGC ATCGCCTCGCGCACCGGCCTGTGGCCGCTGTCCAAGTGGAGCGTGCCCAGCGGCAACCTCAACCTGATCTACCCCGGTCA GGTCGTCACCTACAACGGCGGCGGCAGCGTCGCCACCGGCAGCAACGCCCCACCGTCCCGTACCGTGACCGTCCGCGCTG GCGACACGCTCGGCGGCATCGCGGCACGCCTCGGCATCGGCTACACGCAGCTCACCGGCTATCGCAGCGGCAACCCCAAC GTGATCTACCCCGGCGAAGTGCTGCGCTACTGA
Upstream 100 bases:
>100_bases ACAGGACGCGCCGATAGCCCCGAGAAAACCACAGGCTTAGCCCCCGCCGACCCCGACGGGGGCTATTTCATGCCCACCCC ACACATAGGAAGGAAAACGA
Downstream 100 bases:
>100_bases TAACCCGACCTACCTAGGAACCCTGCACCCGACACCGGGCGAGGTTCCTAGGTTCCAAATCACAGAATCGAGGACAATAT GACCGACGAAAACACCGAAC
Product: glycoside hydrolase, family 25
Products: 1,6-Anhydrobond In The Muramic Acid Residue [C]
Alternate protein names: Glycosyl Hydrolase Family; Bacteriophage Lysin; Glycosyl Hydrolases Family; Phage Lysin
Number of amino acids: Translated: 410; Mature: 409
Protein sequence:
>410_residues MGRFKNRSKPLQALIAALFAVLLACTPAIAMADMVGIDVSGWQGSNVTCTASYDFAVVKVSQGVGFENSSWRTQAKCVTD RGKSLGLYHYAGGNNAEAEADYFVGRARDYIGRAVLVLDWESYQNAQWGNSDWVRRFVQRVHTLTGVWPMVYVQASALGQ IPGDVRANCGLWVAQYASNAPTGYQSRPWNYAVYGEAMRQYTSNGWISGYNGPLDLNYFRGDASQWQAYANPADAAKPAT PPQTEKPPTQTIDLQALATATIRGDYGNGQQRRDALGANYDKVMAIVNQRLAGTATVAPQQAAQANTTRVAVRSGDTMSG IASRTGLWPLSKWSVPSGNLNLIYPGQVVTYNGGGSVATGSNAPPSRTVTVRAGDTLGGIAARLGIGYTQLTGYRSGNPN VIYPGEVLRY
Sequences:
>Translated_410_residues MGRFKNRSKPLQALIAALFAVLLACTPAIAMADMVGIDVSGWQGSNVTCTASYDFAVVKVSQGVGFENSSWRTQAKCVTD RGKSLGLYHYAGGNNAEAEADYFVGRARDYIGRAVLVLDWESYQNAQWGNSDWVRRFVQRVHTLTGVWPMVYVQASALGQ IPGDVRANCGLWVAQYASNAPTGYQSRPWNYAVYGEAMRQYTSNGWISGYNGPLDLNYFRGDASQWQAYANPADAAKPAT PPQTEKPPTQTIDLQALATATIRGDYGNGQQRRDALGANYDKVMAIVNQRLAGTATVAPQQAAQANTTRVAVRSGDTMSG IASRTGLWPLSKWSVPSGNLNLIYPGQVVTYNGGGSVATGSNAPPSRTVTVRAGDTLGGIAARLGIGYTQLTGYRSGNPN VIYPGEVLRY >Mature_409_residues GRFKNRSKPLQALIAALFAVLLACTPAIAMADMVGIDVSGWQGSNVTCTASYDFAVVKVSQGVGFENSSWRTQAKCVTDR GKSLGLYHYAGGNNAEAEADYFVGRARDYIGRAVLVLDWESYQNAQWGNSDWVRRFVQRVHTLTGVWPMVYVQASALGQI PGDVRANCGLWVAQYASNAPTGYQSRPWNYAVYGEAMRQYTSNGWISGYNGPLDLNYFRGDASQWQAYANPADAAKPATP PQTEKPPTQTIDLQALATATIRGDYGNGQQRRDALGANYDKVMAIVNQRLAGTATVAPQQAAQANTTRVAVRSGDTMSGI ASRTGLWPLSKWSVPSGNLNLIYPGQVVTYNGGGSVATGSNAPPSRTVTVRAGDTLGGIAARLGIGYTQLTGYRSGNPNV IYPGEVLRY
Specific function: Murein-Degrading Enzyme. May Play A Role In Recycling Of Muropeptides During Cell Elongation And/Or Cell Division (By Similarity). [C]
COG id: COG0741
COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)
Gene ontology:
Cell location: Attached To The Membrane By A Lipid Anchor [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.2.1.- [C]
Molecular weight: Translated: 44068; Mature: 43937
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRFKNRSKPLQALIAALFAVLLACTPAIAMADMVGIDVSGWQGSNVTCTASYDFAVVKV CCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHEEEECCCCCCCEEEEEECCEEEEEE SQGVGFENSSWRTQAKCVTDRGKSLGLYHYAGGNNAEAEADYFVGRARDYIGRAVLVLDW ECCCCCCCCCCCCHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCEEEEEEC ESYQNAQWGNSDWVRRFVQRVHTLTGVWPMVYVQASALGQIPGDVRANCGLWVAQYASNA CCCCCCCCCCHHHHHHHHHHHHHHHCCCHHEEEEHHHHCCCCCCCCCCCCEEHHHHHCCC PTGYQSRPWNYAVYGEAMRQYTSNGWISGYNGPLDLNYFRGDASQWQAYANPADAAKPAT CCCCCCCCCCEEHHHHHHHHHHCCCCEECCCCCEEEEEECCCHHHHHHCCCCCCCCCCCC PPQTEKPPTQTIDLQALATATIRGDYGNGQQRRDALGANYDKVMAIVNQRLAGTATVAPQ CCCCCCCCCCEEEEEEEEEEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCEECCCH QAAQANTTRVAVRSGDTMSGIASRTGLWPLSKWSVPSGNLNLIYPGQVVTYNGGGSVATG HHHCCCCEEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCEEEEECCEEEEECCCCCCCCC SNAPPSRTVTVRAGDTLGGIAARLGIGYTQLTGYRSGNPNVIYPGEVLRY CCCCCCCEEEEEECCCHHHHHHHHCCCHHHEECEECCCCCEEECHHHHCC >Mature Secondary Structure GRFKNRSKPLQALIAALFAVLLACTPAIAMADMVGIDVSGWQGSNVTCTASYDFAVVKV CCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHEEEECCCCCCCEEEEEECCEEEEEE SQGVGFENSSWRTQAKCVTDRGKSLGLYHYAGGNNAEAEADYFVGRARDYIGRAVLVLDW ECCCCCCCCCCCCHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCEEEEEEC ESYQNAQWGNSDWVRRFVQRVHTLTGVWPMVYVQASALGQIPGDVRANCGLWVAQYASNA CCCCCCCCCCHHHHHHHHHHHHHHHCCCHHEEEEHHHHCCCCCCCCCCCCEEHHHHHCCC PTGYQSRPWNYAVYGEAMRQYTSNGWISGYNGPLDLNYFRGDASQWQAYANPADAAKPAT CCCCCCCCCCEEHHHHHHHHHHCCCCEECCCCCEEEEEECCCHHHHHHCCCCCCCCCCCC PPQTEKPPTQTIDLQALATATIRGDYGNGQQRRDALGANYDKVMAIVNQRLAGTATVAPQ CCCCCCCCCCEEEEEEEEEEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCEECCCH QAAQANTTRVAVRSGDTMSGIASRTGLWPLSKWSVPSGNLNLIYPGQVVTYNGGGSVATG HHHCCCCEEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCEEEEECCEEEEECCCCCCCCC SNAPPSRTVTVRAGDTLGGIAARLGIGYTQLTGYRSGNPNVIYPGEVLRY CCCCCCCEEEEEECCCHHHHHHHHCCCHHHEECEECCCCCEEECHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Muramic Acid Residue (N-Acetylmuramic Acid And N-Acetylglucosamine Residues) [C]
Specific reaction: Cleavage Of The Beta-1,4-Glycosidic Bond Between N-Acetylmuramic Acid And N-Acetylglucosamine Residues, Thereby Conserving The Energy In A Newly Synthesized 1,6-Anhydrobond In The Muramic Acid Residue. [C]
General reaction: Cleavage Of The Beta-1,4-Glycosidic Bond [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA