| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
Click here to switch to the map view.
The map label for this gene is 213692435
Identifier: 213692435
GI number: 213692435
Start: 1716272
End: 1716844
Strand: Direct
Name: 213692435
Synonym: Blon_1564
Alternate gene names: NA
Gene position: 1716272-1716844 (Clockwise)
Preceding gene: 213692434
Following gene: 213692436
Centisome position: 60.59
GC content: 67.54
Gene sequence:
>573_bases ATGGAAACGGAAATCAACGGCGACGTGTTGACCGTGACCGGTGACGACGGGACGGGTCATCTCATCCCGTTGGACGCGAT CGCCTCGTGGGGCGAGCTCCTCGGCTGCGACACGGACATGGAAGCGGTCGCGGCGATCATACGGGTCCGGACGAACAGGT CAGACCCGGGCGTCATCGACCCGGCCACCGGACGCAACGCTTGGACCAGCGCCTACGAGCAGTTGGAGCATGACGCGCTC GTCGACCTGAATCAGGTGCGCGCCGCATCACTGCACCGCGCGTTCACGCCCACCGGGGCGCTGGCCGCCGACGGGCGTGC GGAGACCCGCCGGCTGTTGGGCTTGGATGCCACGACCATAGTGGACTCGTACGAGGCGGACGCGGCTCTCGCCGCCGCGC GGGCGTTGGACGAACCGAACGCCGGCGAGCCGGTGGAGCCGTCGATACGGTTGCCCGCCGGCGTGGACGCCACGAGCCTC GCCACCCTGCTCGCCGAACACGCGACGGAAATCGACCGGGCGCGAACCAGATTTCTGAACGACGTCACACCAACCATCAC CGATAGGAGATAA
Upstream 100 bases:
>100_bases GAGCGGCTGCGGCCTGTGGGCGCGTGGCGTCGGCAACGGCGTCAACATCCCATACGGCACTCAGCTACTCGCCATCCTGG CCGAACAGTAGGAGGTGCCA
Downstream 100 bases:
>100_bases CCAATGACAGACACAACCGAAAGCCTCGTGCAGGCGGACATCAACGACGTGCTCGACAACATGAGCGCCCGTAACGCCAC CCTGACCCGCGAACTCGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues METEINGDVLTVTGDDGTGHLIPLDAIASWGELLGCDTDMEAVAAIIRVRTNRSDPGVIDPATGRNAWTSAYEQLEHDAL VDLNQVRAASLHRAFTPTGALAADGRAETRRLLGLDATTIVDSYEADAALAAARALDEPNAGEPVEPSIRLPAGVDATSL ATLLAEHATEIDRARTRFLNDVTPTITDRR
Sequences:
>Translated_190_residues METEINGDVLTVTGDDGTGHLIPLDAIASWGELLGCDTDMEAVAAIIRVRTNRSDPGVIDPATGRNAWTSAYEQLEHDAL VDLNQVRAASLHRAFTPTGALAADGRAETRRLLGLDATTIVDSYEADAALAAARALDEPNAGEPVEPSIRLPAGVDATSL ATLLAEHATEIDRARTRFLNDVTPTITDRR >Mature_190_residues METEINGDVLTVTGDDGTGHLIPLDAIASWGELLGCDTDMEAVAAIIRVRTNRSDPGVIDPATGRNAWTSAYEQLEHDAL VDLNQVRAASLHRAFTPTGALAADGRAETRRLLGLDATTIVDSYEADAALAAARALDEPNAGEPVEPSIRLPAGVDATSL ATLLAEHATEIDRARTRFLNDVTPTITDRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20167; Mature: 20167
Theoretical pI: Translated: 4.22; Mature: 4.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METEINGDVLTVTGDDGTGHLIPLDAIASWGELLGCDTDMEAVAAIIRVRTNRSDPGVID CCCCCCCCEEEEECCCCCCCEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEC PATGRNAWTSAYEQLEHDALVDLNQVRAASLHRAFTPTGALAADGRAETRRLLGLDATTI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHH VDSYEADAALAAARALDEPNAGEPVEPSIRLPAGVDATSLATLLAEHATEIDRARTRFLN HHCCCHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH DVTPTITDRR CCCCCCCCCC >Mature Secondary Structure METEINGDVLTVTGDDGTGHLIPLDAIASWGELLGCDTDMEAVAAIIRVRTNRSDPGVID CCCCCCCCEEEEECCCCCCCEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEC PATGRNAWTSAYEQLEHDALVDLNQVRAASLHRAFTPTGALAADGRAETRRLLGLDATTI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHH VDSYEADAALAAARALDEPNAGEPVEPSIRLPAGVDATSLATLLAEHATEIDRARTRFLN HHCCCHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH DVTPTITDRR CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA