| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692416
Identifier: 213692416
GI number: 213692416
Start: 1691018
End: 1691632
Strand: Reverse
Name: 213692416
Synonym: Blon_1545
Alternate gene names: NA
Gene position: 1691632-1691018 (Counterclockwise)
Preceding gene: 213692438
Following gene: 213692415
Centisome position: 59.72
GC content: 61.63
Gene sequence:
>615_bases ATGCGTAAGAAGTTTGTTGCGGCTGTTGCCGCGTTCGCCGCCCTGTGCGGCATGGTGTCGGTTCCGGCCAATGCCGCCGA GACTACTCAGCCTATCCGTGAGGACGTTACCCCTCACGTGCTGGTTCCGATACCAGTGCCGGAATCCAAGCTTGTCAGTG AGCCGGAACCGGTGGATATTGACGCTCTCGCCGCCGCTGTTATCCGTGGTGAGTACGGTGACGGTGAGGCGAGGCGTGCC GCTCTCGGTGATAATTATGACGCTGTACAAGCGCGGGTTAACGAGTTGGTGCCGGTTGCCGCGCCGGTTGTCAGCCAGCC GGTTCAGGCCGCGCCGGTTGTCAGCCAGTCGGTACAGTCCGCGCCGGCGCAGTCGGTGCCCCAGGCCGCGCCGCGATCCT ACACATTTGAGGACGTCTACAATCTTGCCGTCAACTCGCCCTACTGCGAGCTCGAAGACGGTTCCGACCTGCCGCAGTGC TATTGGCATGACGGTGCGGGCGACGGTAGCGAACCGCCTTACACGGATATCGTCTATATGCCTGACGGTTACGGGTACCA AGCTCATGAGGACACCATGACGGTGAGCGTATTCGCGCGTAACCCGTGGCTGTGA
Upstream 100 bases:
>100_bases CCCCGTAAGTGCGCCAACACTTGCGGGGCTGACCTTTATCAATTGAGAGATTAAAAAGGCGGTACTCATTGTACCGCCTC ACATGGAAGTGAGGACTATC
Downstream 100 bases:
>100_bases CCTTTTACATGTCGGGCGGCATTCTCCGCCCAAGTTCATTCAGTCGCGCGGCTGTCTCCGCGCTTCATCAATTCAAGGGA GATTCAACAATGTCTATCGA
Product: Cpl-7 lysozyme, C-terminal domain protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MRKKFVAAVAAFAALCGMVSVPANAAETTQPIREDVTPHVLVPIPVPESKLVSEPEPVDIDALAAAVIRGEYGDGEARRA ALGDNYDAVQARVNELVPVAAPVVSQPVQAAPVVSQSVQSAPAQSVPQAAPRSYTFEDVYNLAVNSPYCELEDGSDLPQC YWHDGAGDGSEPPYTDIVYMPDGYGYQAHEDTMTVSVFARNPWL
Sequences:
>Translated_204_residues MRKKFVAAVAAFAALCGMVSVPANAAETTQPIREDVTPHVLVPIPVPESKLVSEPEPVDIDALAAAVIRGEYGDGEARRA ALGDNYDAVQARVNELVPVAAPVVSQPVQAAPVVSQSVQSAPAQSVPQAAPRSYTFEDVYNLAVNSPYCELEDGSDLPQC YWHDGAGDGSEPPYTDIVYMPDGYGYQAHEDTMTVSVFARNPWL >Mature_204_residues MRKKFVAAVAAFAALCGMVSVPANAAETTQPIREDVTPHVLVPIPVPESKLVSEPEPVDIDALAAAVIRGEYGDGEARRA ALGDNYDAVQARVNELVPVAAPVVSQPVQAAPVVSQSVQSAPAQSVPQAAPRSYTFEDVYNLAVNSPYCELEDGSDLPQC YWHDGAGDGSEPPYTDIVYMPDGYGYQAHEDTMTVSVFARNPWL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21759; Mature: 21759
Theoretical pI: Translated: 4.05; Mature: 4.05
Prosite motif: PS00238 OPSIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKKFVAAVAAFAALCGMVSVPANAAETTQPIREDVTPHVLVPIPVPESKLVSEPEPVDI CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHCCCCCCCCH DALAAAVIRGEYGDGEARRAALGDNYDAVQARVNELVPVAAPVVSQPVQAAPVVSQSVQS HHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH APAQSVPQAAPRSYTFEDVYNLAVNSPYCELEDGSDLPQCYWHDGAGDGSEPPYTDIVYM CCHHHCCCCCCCCCCHHHHHHHHCCCCCEECCCCCCCCCEEEECCCCCCCCCCCEEEEEC PDGYGYQAHEDTMTVSVFARNPWL CCCCCCCCCCCEEEEEEEECCCCC >Mature Secondary Structure MRKKFVAAVAAFAALCGMVSVPANAAETTQPIREDVTPHVLVPIPVPESKLVSEPEPVDI CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHCCCCCCCCH DALAAAVIRGEYGDGEARRAALGDNYDAVQARVNELVPVAAPVVSQPVQAAPVVSQSVQS HHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH APAQSVPQAAPRSYTFEDVYNLAVNSPYCELEDGSDLPQCYWHDGAGDGSEPPYTDIVYM CCHHHCCCCCCCCCCHHHHHHHHCCCCCEECCCCCCCCCEEEECCCCCCCCCCCEEEEEC PDGYGYQAHEDTMTVSVFARNPWL CCCCCCCCCCCEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA