| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692408
Identifier: 213692408
GI number: 213692408
Start: 1687366
End: 1687734
Strand: Reverse
Name: 213692408
Synonym: Blon_1537
Alternate gene names: NA
Gene position: 1687734-1687366 (Counterclockwise)
Preceding gene: 213692409
Following gene: 213692407
Centisome position: 59.58
GC content: 58.81
Gene sequence:
>369_bases ATGACCAGTACGCCAAGTGAACCGCGCCTGTATGACGTGTGGCTGATGTGGGTCGAGTTTCCCGACCATCCCGGTATCGG CAAGCCGCGTCCCGTGGTAATCACCGAGGTTGACGGTGATCTGGTGTCGGGTATCGTGGCGAAGATAACCGGCAACACTG ATTGGGATGAGGCCGGCGACGTGCCGCTGCTCGACTGGAAGGCCGAGGGGCTGTTGAAGCCGTCACTCGTGCGCTGTTCG CAACGCTTCTACTTCAACAGGAGCGAACTGCTGCAATGGTTCGGACGACTCTCGTTGAGGGACGCGGAGCATGTTAACGA CGGATTGGAAGCCACGTTGGACATTCCACCATACAGGCGGAGCGTATAG
Upstream 100 bases:
>100_bases TATCCGGTGCCGCCTGTTCACAATGCCTACATGTTCGAGCGTTCGGAGAAGGGCCATGTGATACTGCCCGCCGATTGGAA TGATTCGGAGGATGCTGTCT
Downstream 100 bases:
>100_bases CCGTTATCGTTTTCATGGCCTCATGGACTTGTTCTATGAGGCCATTCTTATAGAAACCATCATTTAGAACCGCATCATAG GGCTTTCTATGGTGCGGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MTSTPSEPRLYDVWLMWVEFPDHPGIGKPRPVVITEVDGDLVSGIVAKITGNTDWDEAGDVPLLDWKAEGLLKPSLVRCS QRFYFNRSELLQWFGRLSLRDAEHVNDGLEATLDIPPYRRSV
Sequences:
>Translated_122_residues MTSTPSEPRLYDVWLMWVEFPDHPGIGKPRPVVITEVDGDLVSGIVAKITGNTDWDEAGDVPLLDWKAEGLLKPSLVRCS QRFYFNRSELLQWFGRLSLRDAEHVNDGLEATLDIPPYRRSV >Mature_121_residues TSTPSEPRLYDVWLMWVEFPDHPGIGKPRPVVITEVDGDLVSGIVAKITGNTDWDEAGDVPLLDWKAEGLLKPSLVRCSQ RFYFNRSELLQWFGRLSLRDAEHVNDGLEATLDIPPYRRSV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13867; Mature: 13736
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSTPSEPRLYDVWLMWVEFPDHPGIGKPRPVVITEVDGDLVSGIVAKITGNTDWDEAGD CCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEECCCHHHHHHHEEECCCCCCCCCCC VPLLDWKAEGLLKPSLVRCSQRFYFNRSELLQWFGRLSLRDAEHVNDGLEATLDIPPYRR CCEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCC SV CC >Mature Secondary Structure TSTPSEPRLYDVWLMWVEFPDHPGIGKPRPVVITEVDGDLVSGIVAKITGNTDWDEAGD CCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEECCCHHHHHHHEEECCCCCCCCCCC VPLLDWKAEGLLKPSLVRCSQRFYFNRSELLQWFGRLSLRDAEHVNDGLEATLDIPPYRR CCEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCC SV CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA