| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
Click here to switch to the map view.
The map label for this gene is 213692375
Identifier: 213692375
GI number: 213692375
Start: 1667631
End: 1668482
Strand: Direct
Name: 213692375
Synonym: Blon_1502
Alternate gene names: NA
Gene position: 1667631-1668482 (Clockwise)
Preceding gene: 213692374
Following gene: 213692376
Centisome position: 58.87
GC content: 56.46
Gene sequence:
>852_bases ATGACCGTCGAGCAGATGACCGATGACGATTACTTCGCGTTGGACGCGGTGGATCAGACTTCGTTGAAGAAAATGCTGGT AAGCCCGTTGGCGTATTCGGATTACCTGACCGGTGAGCATGGTTACTCTTCGGCGTTGGAGTTTGGTAAGGCGGCGCACA GCATGGTTTTGGGCAGTGGCCCGCAGGTTGTGGCTAAACCGAATCTGCGTACCAAGGAGGGCAAGGCTCTTCGTGACAGG CTGGTCGAACAGTATGGTGCGGACGACATCGTGTGGCTGTCCTCTGATGATGTGGAGAAGGTTCAGGCCATGCGGGACAT GGTTGGAGACTTTTTCACGAAGCTGGATGGTCAGCCGGAGGTGGCGATGATCGCCACCGACCCTGATACCGGGTTGTTGA TTAAGGGCAAGGCGGACTGGTTGCCGTCCACTCCCGACCCGGATGGTGTGCTGCGTATCCGTGATTACAAGACCACGGTG AAGTCGCCGGACGAGTTCGAGCGTTCCTGCTGGCAGTACGGGTATCACATTCAGGCCGCGTTCTACATGAGTCTCTACCG GTTGACGATGCCCGACTATAAGGGGCCGTTGGGTTTCGAGTTCATCGTGCAGGAGAAGAACCCGCCGTTCGACTGGATGC GCTACGAGATTCAGGAGGATTCACCCATCATCACCGAACTGGCGGAACCGAAGATAAACCACGCCTTGCAGAGCATCAAA TGGTTCCGCGACAACACGGAGAACCCGTTGGAGGCGATGAGAGCCTACGGGTTGCCCAAATACCCGCAGGATGTCGTGTT CCCCGACTGGAAGCTGTTGGAGGAAGAGGAGGAGATTGAATCATGGCGGTAG
Upstream 100 bases:
>100_bases AGGTCTACGACGCGGAGGACGTTGACGATTTTCTCGACTCGGTGGCCGACACCATCAAGGTTTTAGGCAAGGAAGTACTC AAAGCAAGAAAGAAAAGGCA
Downstream 100 bases:
>100_bases TCAAGAAGAACCGTAAGGCTTACGGATACGATTACGCGGATTTGCCGTCGATTCTCCTTTATGTTGACGAAACCCTGCAC CTTGAGGTCAGGCAGCATGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 283; Mature: 282
Protein sequence:
>283_residues MTVEQMTDDDYFALDAVDQTSLKKMLVSPLAYSDYLTGEHGYSSALEFGKAAHSMVLGSGPQVVAKPNLRTKEGKALRDR LVEQYGADDIVWLSSDDVEKVQAMRDMVGDFFTKLDGQPEVAMIATDPDTGLLIKGKADWLPSTPDPDGVLRIRDYKTTV KSPDEFERSCWQYGYHIQAAFYMSLYRLTMPDYKGPLGFEFIVQEKNPPFDWMRYEIQEDSPIITELAEPKINHALQSIK WFRDNTENPLEAMRAYGLPKYPQDVVFPDWKLLEEEEEIESWR
Sequences:
>Translated_283_residues MTVEQMTDDDYFALDAVDQTSLKKMLVSPLAYSDYLTGEHGYSSALEFGKAAHSMVLGSGPQVVAKPNLRTKEGKALRDR LVEQYGADDIVWLSSDDVEKVQAMRDMVGDFFTKLDGQPEVAMIATDPDTGLLIKGKADWLPSTPDPDGVLRIRDYKTTV KSPDEFERSCWQYGYHIQAAFYMSLYRLTMPDYKGPLGFEFIVQEKNPPFDWMRYEIQEDSPIITELAEPKINHALQSIK WFRDNTENPLEAMRAYGLPKYPQDVVFPDWKLLEEEEEIESWR >Mature_282_residues TVEQMTDDDYFALDAVDQTSLKKMLVSPLAYSDYLTGEHGYSSALEFGKAAHSMVLGSGPQVVAKPNLRTKEGKALRDRL VEQYGADDIVWLSSDDVEKVQAMRDMVGDFFTKLDGQPEVAMIATDPDTGLLIKGKADWLPSTPDPDGVLRIRDYKTTVK SPDEFERSCWQYGYHIQAAFYMSLYRLTMPDYKGPLGFEFIVQEKNPPFDWMRYEIQEDSPIITELAEPKINHALQSIKW FRDNTENPLEAMRAYGLPKYPQDVVFPDWKLLEEEEEIESWR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32476; Mature: 32345
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVEQMTDDDYFALDAVDQTSLKKMLVSPLAYSDYLTGEHGYSSALEFGKAAHSMVLGSG CCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHEECCC PQVVAKPNLRTKEGKALRDRLVEQYGADDIVWLSSDDVEKVQAMRDMVGDFFTKLDGQPE CCEEECCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCC VAMIATDPDTGLLIKGKADWLPSTPDPDGVLRIRDYKTTVKSPDEFERSCWQYGYHIQAA EEEEEECCCCCEEEECCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCHHHHH FYMSLYRLTMPDYKGPLGFEFIVQEKNPPFDWMRYEIQEDSPIITELAEPKINHALQSIK HHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHEEEECCCCCHHHHHCCHHHHHHHHHHH WFRDNTENPLEAMRAYGLPKYPQDVVFPDWKLLEEEEEIESWR HHHCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHCCHHHHHCCC >Mature Secondary Structure TVEQMTDDDYFALDAVDQTSLKKMLVSPLAYSDYLTGEHGYSSALEFGKAAHSMVLGSG CCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHEECCC PQVVAKPNLRTKEGKALRDRLVEQYGADDIVWLSSDDVEKVQAMRDMVGDFFTKLDGQPE CCEEECCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCC VAMIATDPDTGLLIKGKADWLPSTPDPDGVLRIRDYKTTVKSPDEFERSCWQYGYHIQAA EEEEEECCCCCEEEECCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCHHHHH FYMSLYRLTMPDYKGPLGFEFIVQEKNPPFDWMRYEIQEDSPIITELAEPKINHALQSIK HHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHEEEECCCCCHHHHHCCHHHHHHHHHHH WFRDNTENPLEAMRAYGLPKYPQDVVFPDWKLLEEEEEIESWR HHHCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA