| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692336
Identifier: 213692336
GI number: 213692336
Start: 1622260
End: 1622916
Strand: Direct
Name: 213692336
Synonym: Blon_1461
Alternate gene names: NA
Gene position: 1622260-1622916 (Clockwise)
Preceding gene: 213692333
Following gene: 213692337
Centisome position: 57.27
GC content: 56.32
Gene sequence:
>657_bases ATGAGGTATTTCACGACCGACACGCATTTCGGGCATCCACTGGTCACGGTGTTGCGAGGGTTCACGACGTTCGATCCGAC GCACTCGCGCTATGAGGAGGTGCTGCGCGCGCATGATCGCAAGACCGCCGAAGATTGGGCCAAGGAGGAGACGTTCGGCG CGGGTCTGACGTTTCGTCAGGTCGCCGATACGGATGCGCATGACAAGGCGATTGTGGATCATATCAACACTTTGGTCGGC CCGGATGATGAGCTGTGGATTCTGGGTGATATCGGTTTCCGCACATCGCTGACCCATCTGAAGAACTGCCTGCGAGCGCT CAATTGCAAGCATCTGCATGGTGTGATCGGCAACCATGATGACTGGTGGCTGGAAGACCGCCCCGCACTCAACCTGTTCG AAAGTTTGGAGCCGCACGATACGGTTAAGATTGAGGGACTCGGTACGGTCAATCTTTCACATTACCCGTATCGGGAGGAT CTGGCATACAGTTGGCCCGATGATGTGGCGAAGTTCAGCGGCAAGGCGTTGCCGTTTGACGGTCGCAGACTGCTGTATGG ACATACGCATCAGCTTTCGCCAGATGGTGCACGCCCGGAGGCACTGAATGTTGGCATTGACACAGCATTGACCGCCGTTG AGATGTATGCACGCTGA
Upstream 100 bases:
>100_bases CCCTGCAATGCGCCTCATTATGGCAACACGAACCGACAGGTGCCGGCTGCGCCTAGGATGGGAAATCATTGCTGCACGCC GAAAAGGGGAGGCGACTGTC
Downstream 100 bases:
>100_bases ACACGCGCCTCAACGGCATTGGTCTCGTCATCTCTCGCTCACACCAACGGATTGCCGGCAAGACGGGTCAATTCGGCGTT CAGCTCGGGGAAATGCTCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MRYFTTDTHFGHPLVTVLRGFTTFDPTHSRYEEVLRAHDRKTAEDWAKEETFGAGLTFRQVADTDAHDKAIVDHINTLVG PDDELWILGDIGFRTSLTHLKNCLRALNCKHLHGVIGNHDDWWLEDRPALNLFESLEPHDTVKIEGLGTVNLSHYPYRED LAYSWPDDVAKFSGKALPFDGRRLLYGHTHQLSPDGARPEALNVGIDTALTAVEMYAR
Sequences:
>Translated_218_residues MRYFTTDTHFGHPLVTVLRGFTTFDPTHSRYEEVLRAHDRKTAEDWAKEETFGAGLTFRQVADTDAHDKAIVDHINTLVG PDDELWILGDIGFRTSLTHLKNCLRALNCKHLHGVIGNHDDWWLEDRPALNLFESLEPHDTVKIEGLGTVNLSHYPYRED LAYSWPDDVAKFSGKALPFDGRRLLYGHTHQLSPDGARPEALNVGIDTALTAVEMYAR >Mature_218_residues MRYFTTDTHFGHPLVTVLRGFTTFDPTHSRYEEVLRAHDRKTAEDWAKEETFGAGLTFRQVADTDAHDKAIVDHINTLVG PDDELWILGDIGFRTSLTHLKNCLRALNCKHLHGVIGNHDDWWLEDRPALNLFESLEPHDTVKIEGLGTVNLSHYPYRED LAYSWPDDVAKFSGKALPFDGRRLLYGHTHQLSPDGARPEALNVGIDTALTAVEMYAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24748; Mature: 24748
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYFTTDTHFGHPLVTVLRGFTTFDPTHSRYEEVLRAHDRKTAEDWAKEETFGAGLTFRQ CCEECCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEHH VADTDAHDKAIVDHINTLVGPDDELWILGDIGFRTSLTHLKNCLRALNCKHLHGVIGNHD HCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCHHHHHCCCCCC DWWLEDRPALNLFESLEPHDTVKIEGLGTVNLSHYPYREDLAYSWPDDVAKFSGKALPFD CCCCCCCCHHHHHHCCCCCCEEEEECCEEEECCCCCCHHCCCCCCCHHHHHHCCCCCCCC GRRLLYGHTHQLSPDGARPEALNVGIDTALTAVEMYAR CCEEEECCCCCCCCCCCCCCEEECCHHHHHHHHHHHCC >Mature Secondary Structure MRYFTTDTHFGHPLVTVLRGFTTFDPTHSRYEEVLRAHDRKTAEDWAKEETFGAGLTFRQ CCEECCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEHH VADTDAHDKAIVDHINTLVGPDDELWILGDIGFRTSLTHLKNCLRALNCKHLHGVIGNHD HCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCHHHHHCCCCCC DWWLEDRPALNLFESLEPHDTVKIEGLGTVNLSHYPYREDLAYSWPDDVAKFSGKALPFD CCCCCCCCHHHHHHCCCCCCEEEEECCEEEECCCCCCHHCCCCCCCHHHHHHCCCCCCCC GRRLLYGHTHQLSPDGARPEALNVGIDTALTAVEMYAR CCEEEECCCCCCCCCCCCCCEEECCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA