| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is trmI [H]
Identifier: 213692332
GI number: 213692332
Start: 1619144
End: 1620214
Strand: Reverse
Name: trmI [H]
Synonym: Blon_1457
Alternate gene names: 213692332
Gene position: 1620214-1619144 (Counterclockwise)
Preceding gene: 213692334
Following gene: 213692331
Centisome position: 57.2
GC content: 62.93
Gene sequence:
>1071_bases ATGGAGCCGAGGCGCGGGCCTCTCACCGCAGGTGAGAAGGTGCAGTTCACCGACCGCAAGGGCAAGAAGATCACCGATCA GCTTGTGGCTGGCGGCTCCACGCAGACCGAGCATGGCCTGATTCTGCATGACGATGTGATCGGCAAGACCGAAGGCACCG TCATCCTCACCGTGCACGCCAAGCGTGAGGCGCAGGTCAACCAGGTTTATCCAGAGAAAGACAAGAACAAGCCGTGGAAG TCGTCGCGCGCCATCGGCGGCTGGGAATATGCGGTGATGCGCCCGCGACTGGCCGATTACGTGCTGTCGATGCCGCGCGG CGCGCAGATCATGTATCCGAAGGACATCGCCCAGGTTGTCCAGCTCGGCGACATCCGTTCCGGCATGCGCGTGCTTGAGT CCGGTGCCGGCTCGGGCGCGATGAGCGTGAACCTGCTGGACGCCGTGGGCGATCGTGGCCATCTGACCACGATCGAGCTG CGCCCCGAATTCGCCAAAGTGGCTCAGGCCAACGCCACGCTGTATTACGGCGAGGCCCCCAGCTGGTGGGATCTCAAAAC CGGCGACTTCGACTCCGTGGCCGCCGAACTGCCCGAACACTGGTTCGACCGCATCATGCTCGACATGCTCGACCCGTGGA ACAGGCTCGACCAGGCATACCGCGTGATTGCCCCCGGCGGCGTGTTGGTCAGTTACGTAACTACCACCACGCAGATGAGC CGACTGGCCGAAGCCCTGCGCGCGGCCGGCTGCTGGACCGAGCCGCAGATCCAGGAATCGTTCGAACGCACATGGAAGGC CCAAGGCCTCGCCGTACGCCCCGACCACCAGATGATCGGCCATACCGGTTTCCTTGTTATCTCGCGCGCCATGGCCTCCG GGTTCGAGGCGCTCAGAAAGCGCGATCGCGTGACCAAGGACACACAGACCGACATCGACTCGCTCACCGACGAACAGCGT GAGGCGCAGATCGAGGAACTGGAACTGCGCGACATCTCCGACCACAAACTACGTAAGGTGTTGCGTGACCTCGACCGTCA GGTGGGAGAACTTGGCAACACGCACGAATAA
Upstream 100 bases:
>100_bases CTGGCTTGTCATCTGCATTCGCATCGTCATCACCTCACCAACGAGCTTACATGCATTAGACTTGTAGCGATTGACCCACC GAGCACGCAAGGAGCAAGTT
Downstream 100 bases:
>100_bases CCGCCAAACGATGAGTTTGTGAGCGCTCACACACCTCTATACTGGAAGCAACGCCACACCGCCACACCGGGCAGGCGGTT CGTGAAGGGAGCCACGGATG
Product: protein-L-isoaspartate methyltransferase
Products: NA
Alternate protein names: tRNA(m1A58)-methyltransferase; tRNA(m1A58)MTase [H]
Number of amino acids: Translated: 356; Mature: 356
Protein sequence:
>356_residues MEPRRGPLTAGEKVQFTDRKGKKITDQLVAGGSTQTEHGLILHDDVIGKTEGTVILTVHAKREAQVNQVYPEKDKNKPWK SSRAIGGWEYAVMRPRLADYVLSMPRGAQIMYPKDIAQVVQLGDIRSGMRVLESGAGSGAMSVNLLDAVGDRGHLTTIEL RPEFAKVAQANATLYYGEAPSWWDLKTGDFDSVAAELPEHWFDRIMLDMLDPWNRLDQAYRVIAPGGVLVSYVTTTTQMS RLAEALRAAGCWTEPQIQESFERTWKAQGLAVRPDHQMIGHTGFLVISRAMASGFEALRKRDRVTKDTQTDIDSLTDEQR EAQIEELELRDISDHKLRKVLRDLDRQVGELGNTHE
Sequences:
>Translated_356_residues MEPRRGPLTAGEKVQFTDRKGKKITDQLVAGGSTQTEHGLILHDDVIGKTEGTVILTVHAKREAQVNQVYPEKDKNKPWK SSRAIGGWEYAVMRPRLADYVLSMPRGAQIMYPKDIAQVVQLGDIRSGMRVLESGAGSGAMSVNLLDAVGDRGHLTTIEL RPEFAKVAQANATLYYGEAPSWWDLKTGDFDSVAAELPEHWFDRIMLDMLDPWNRLDQAYRVIAPGGVLVSYVTTTTQMS RLAEALRAAGCWTEPQIQESFERTWKAQGLAVRPDHQMIGHTGFLVISRAMASGFEALRKRDRVTKDTQTDIDSLTDEQR EAQIEELELRDISDHKLRKVLRDLDRQVGELGNTHE >Mature_356_residues MEPRRGPLTAGEKVQFTDRKGKKITDQLVAGGSTQTEHGLILHDDVIGKTEGTVILTVHAKREAQVNQVYPEKDKNKPWK SSRAIGGWEYAVMRPRLADYVLSMPRGAQIMYPKDIAQVVQLGDIRSGMRVLESGAGSGAMSVNLLDAVGDRGHLTTIEL RPEFAKVAQANATLYYGEAPSWWDLKTGDFDSVAAELPEHWFDRIMLDMLDPWNRLDQAYRVIAPGGVLVSYVTTTTQMS RLAEALRAAGCWTEPQIQESFERTWKAQGLAVRPDHQMIGHTGFLVISRAMASGFEALRKRDRVTKDTQTDIDSLTDEQR EAQIEELELRDISDHKLRKVLRDLDRQVGELGNTHE
Specific function: Catalyzes the formation of N(1)-methyladenine at position 58 (m1A58) in tRNA. Is required for cell growth at extreme temperatures [H]
COG id: COG2519
COG function: function code J; tRNA(1-methyladenosine) methyltransferase and related methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. TrmI family [H]
Homologues:
Organism=Homo sapiens, GI222831587, Length=200, Percent_Identity=33.5, Blast_Score=102, Evalue=7e-22, Organism=Homo sapiens, GI123173772, Length=293, Percent_Identity=24.2320819112628, Blast_Score=84, Evalue=3e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014816 [H]
Pfam domain/function: PF08704 GCD14 [H]
EC number: =2.1.1.36 [H]
Molecular weight: Translated: 39907; Mature: 39907
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPRRGPLTAGEKVQFTDRKGKKITDQLVAGGSTQTEHGLILHDDVIGKTEGTVILTVHA CCCCCCCCCCCCEEEECCCCCCHHHHHHHCCCCCCCCCCEEEECCCCCCCCCEEEEEEEC KREAQVNQVYPEKDKNKPWKSSRAIGGWEYAVMRPRLADYVLSMPRGAQIMYPKDIAQVV CCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCHHHHHHHHCCCCCCEEECHHHHHHHH QLGDIRSGMRVLESGAGSGAMSVNLLDAVGDRGHLTTIELRPEFAKVAQANATLYYGEAP HHHHHHHHHHHHHCCCCCCCEEEEHHHHCCCCCCEEEEEECHHHHHHHHCCCEEEECCCC SWWDLKTGDFDSVAAELPEHWFDRIMLDMLDPWNRLDQAYRVIAPGGVLVSYVTTTTQMS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEEECCCCEEEHHHHHHHHHH RLAEALRAAGCWTEPQIQESFERTWKAQGLAVRPDHQMIGHTGFLVISRAMASGFEALRK HHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEECCCHHHHCCHHHHHHHHHHHHHHHHHHH RDRVTKDTQTDIDSLTDEQREAQIEELELRDISDHKLRKVLRDLDRQVGELGNTHE HHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MEPRRGPLTAGEKVQFTDRKGKKITDQLVAGGSTQTEHGLILHDDVIGKTEGTVILTVHA CCCCCCCCCCCCEEEECCCCCCHHHHHHHCCCCCCCCCCEEEECCCCCCCCCEEEEEEEC KREAQVNQVYPEKDKNKPWKSSRAIGGWEYAVMRPRLADYVLSMPRGAQIMYPKDIAQVV CCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCHHHHHHHHCCCCCCEEECHHHHHHHH QLGDIRSGMRVLESGAGSGAMSVNLLDAVGDRGHLTTIELRPEFAKVAQANATLYYGEAP HHHHHHHHHHHHHCCCCCCCEEEEHHHHCCCCCCEEEEEECHHHHHHHHCCCEEEECCCC SWWDLKTGDFDSVAAELPEHWFDRIMLDMLDPWNRLDQAYRVIAPGGVLVSYVTTTTQMS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEEECCCCEEEHHHHHHHHHH RLAEALRAAGCWTEPQIQESFERTWKAQGLAVRPDHQMIGHTGFLVISRAMASGFEALRK HHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEECCCHHHHCCHHHHHHHHHHHHHHHHHHH RDRVTKDTQTDIDSLTDEQREAQIEELELRDISDHKLRKVLRDLDRQVGELGNTHE HHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA