| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692319
Identifier: 213692319
GI number: 213692319
Start: 1602180
End: 1603301
Strand: Reverse
Name: 213692319
Synonym: Blon_1444
Alternate gene names: NA
Gene position: 1603301-1602180 (Counterclockwise)
Preceding gene: 213692320
Following gene: 213692314
Centisome position: 56.6
GC content: 58.73
Gene sequence:
>1122_bases ATGGGGAACATCACCGACGATATTCGGCAACATTTCGACACTTTCGCCGCACTGCCGTTCACCGAGGCGGACAGTCTCGC CCTGTCCCAGCTGGCCTACGCGCGCATGCCGGATAACGTGCCGCGCTATCACGAGGATTCGGCGGACGCCAGCGGCATGA TTCCCGCGGTCTCCATCCGCGACCTGCTACGCGCCGAATGCTATGACGACATGTTCGGCAAGGTGTGGTCGCCTTCGATG AATGTCGATCTGTTACGTGCGATGAGCGAGAGCCCACGTTGGAGGAACCTACGCGTGGGCGCCTACGTGGACGAATTCGA TGCCGAAACCACCAAGCAATTCTCGGCCTGCGTGTTCGAACTGGGTAACGGCACGCTCTATGTGGCTTTTCGCGGTACCG ACAGCTCAATCGTCGGGTGGAAAGAGGACTTCATGATGGCGTTCCGCCGCGCGGTCGCCTCGCAGGAGGCCGCCGCGCGT TATCTGACCGAGCTGGCTGGCCATTGGGCCGGGCCGATTATGGTCGGCGGCCATTCCAAAGGCGGCAATCTGGCGGTATA CGCGGCGGCCAATGTGCCCGGCGAAATTCAGGGACGTATCACGGCCGTGTATTCGCACGATGGTCCAGGCTTCGATGAGG CGTTCTTCGATGAGGATGGGTACGCGCGCATTGCGCCGAAAATCCATAAATCGGTACCGGGATCGTCGATCATCGGCATG CTGTTTGAGACTCGTGAGCATGTGGAAGACGGCTATACGGTGGTCAGCAGCGACGGTGCCAGCATCATGCAGCATTTCGC ATTGCACTGGCAAGTAGATCATGGCCAATTCGTACAGGCTGATGGACTGACAAGTAGCGCGCGATACCTGGCGCGCACGA TCAACGGATGGATGGCGAAATACGATGATGAGCATCGCCGCAGGTTCATCGAAAACCTGTTTGCCATCTTCGAGGCTGGC GGATACGACACATTCGGCGACCTCACTTCGCATTTGACACAGTCACTGCCGATTATGCTCGCCGCGGCCCGCAGCATTGA TGTTGAAGACCGTGACGTGATGATTGAGGTGCTTAAGGGATTTGCCGCGACAGCCGCTACGTCGGTAATCTCGGCCAAGT AG
Upstream 100 bases:
>100_bases GAGATAGGGTTCTAAACTCTGGGACCGGCTCGCCTGTGATGAAAACCCGCTCGGCGTAGAATTACCGTAGGTTCGTTGCA TTCGAACAAGGAAGGCCGCT
Downstream 100 bases:
>100_bases TCGGAGGCCATCAAACTGGTTGTGCCAGTCAGTCTCAATAGCGCAAGAGCCGGCCCCTGAGATACTCAGGGGCCGGCTCT TACTTCCATTTCCCCAGCGG
Product: narrowly conserved hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 373; Mature: 372
Protein sequence:
>373_residues MGNITDDIRQHFDTFAALPFTEADSLALSQLAYARMPDNVPRYHEDSADASGMIPAVSIRDLLRAECYDDMFGKVWSPSM NVDLLRAMSESPRWRNLRVGAYVDEFDAETTKQFSACVFELGNGTLYVAFRGTDSSIVGWKEDFMMAFRRAVASQEAAAR YLTELAGHWAGPIMVGGHSKGGNLAVYAAANVPGEIQGRITAVYSHDGPGFDEAFFDEDGYARIAPKIHKSVPGSSIIGM LFETREHVEDGYTVVSSDGASIMQHFALHWQVDHGQFVQADGLTSSARYLARTINGWMAKYDDEHRRRFIENLFAIFEAG GYDTFGDLTSHLTQSLPIMLAAARSIDVEDRDVMIEVLKGFAATAATSVISAK
Sequences:
>Translated_373_residues MGNITDDIRQHFDTFAALPFTEADSLALSQLAYARMPDNVPRYHEDSADASGMIPAVSIRDLLRAECYDDMFGKVWSPSM NVDLLRAMSESPRWRNLRVGAYVDEFDAETTKQFSACVFELGNGTLYVAFRGTDSSIVGWKEDFMMAFRRAVASQEAAAR YLTELAGHWAGPIMVGGHSKGGNLAVYAAANVPGEIQGRITAVYSHDGPGFDEAFFDEDGYARIAPKIHKSVPGSSIIGM LFETREHVEDGYTVVSSDGASIMQHFALHWQVDHGQFVQADGLTSSARYLARTINGWMAKYDDEHRRRFIENLFAIFEAG GYDTFGDLTSHLTQSLPIMLAAARSIDVEDRDVMIEVLKGFAATAATSVISAK >Mature_372_residues GNITDDIRQHFDTFAALPFTEADSLALSQLAYARMPDNVPRYHEDSADASGMIPAVSIRDLLRAECYDDMFGKVWSPSMN VDLLRAMSESPRWRNLRVGAYVDEFDAETTKQFSACVFELGNGTLYVAFRGTDSSIVGWKEDFMMAFRRAVASQEAAARY LTELAGHWAGPIMVGGHSKGGNLAVYAAANVPGEIQGRITAVYSHDGPGFDEAFFDEDGYARIAPKIHKSVPGSSIIGML FETREHVEDGYTVVSSDGASIMQHFALHWQVDHGQFVQADGLTSSARYLARTINGWMAKYDDEHRRRFIENLFAIFEAGG YDTFGDLTSHLTQSLPIMLAAARSIDVEDRDVMIEVLKGFAATAATSVISAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41088; Mature: 40957
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNITDDIRQHFDTFAALPFTEADSLALSQLAYARMPDNVPRYHEDSADASGMIPAVSIR CCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHH DLLRAECYDDMFGKVWSPSMNVDLLRAMSESPRWRNLRVGAYVDEFDAETTKQFSACVFE HHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEECCCHHHHCCHHHHHHHHHHHE LGNGTLYVAFRGTDSSIVGWKEDFMMAFRRAVASQEAAARYLTELAGHWAGPIMVGGHSK ECCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCC GGNLAVYAAANVPGEIQGRITAVYSHDGPGFDEAFFDEDGYARIAPKIHKSVPGSSIIGM CCCEEEEEECCCCCCCCCEEEEEEECCCCCCCHHHCCCCCCEECCHHHHHCCCCHHHHHH LFETREHVEDGYTVVSSDGASIMQHFALHWQVDHGQFVQADGLTSSARYLARTINGWMAK HHHHHHHHCCCCEEEECCCHHHHHHHHHEEECCCCCEEEECCCCHHHHHHHHHHHHHHHH YDDEHRRRFIENLFAIFEAGGYDTFGDLTSHLTQSLPIMLAAARSIDVEDRDVMIEVLKG CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHCCCCCHHHHHHHHHHH FAATAATSVISAK HHHHHHHHHHCCC >Mature Secondary Structure GNITDDIRQHFDTFAALPFTEADSLALSQLAYARMPDNVPRYHEDSADASGMIPAVSIR CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHH DLLRAECYDDMFGKVWSPSMNVDLLRAMSESPRWRNLRVGAYVDEFDAETTKQFSACVFE HHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEECCCHHHHCCHHHHHHHHHHHE LGNGTLYVAFRGTDSSIVGWKEDFMMAFRRAVASQEAAARYLTELAGHWAGPIMVGGHSK ECCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCC GGNLAVYAAANVPGEIQGRITAVYSHDGPGFDEAFFDEDGYARIAPKIHKSVPGSSIIGM CCCEEEEEECCCCCCCCCEEEEEEECCCCCCCHHHCCCCCCEECCHHHHHCCCCHHHHHH LFETREHVEDGYTVVSSDGASIMQHFALHWQVDHGQFVQADGLTSSARYLARTINGWMAK HHHHHHHHCCCCEEEECCCHHHHHHHHHEEECCCCCEEEECCCCHHHHHHHHHHHHHHHH YDDEHRRRFIENLFAIFEAGGYDTFGDLTSHLTQSLPIMLAAARSIDVEDRDVMIEVLKG CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHCCCCCHHHHHHHHHHH FAATAATSVISAK HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA