Click here to switch to the map view.

The map label for this gene is 213692314

Identifier: 213692314

GI number: 213692314

Start: 1594821

End: 1595705

Strand: Reverse

Name: 213692314

Synonym: Blon_1438

Alternate gene names: NA

Gene position: 1595705-1594821 (Counterclockwise)

Preceding gene: 213692319

Following gene: 213692310

Centisome position: 56.33

GC content: 51.75

Gene sequence:

>885_bases
ATGTTGCTGCATGGTGGCGGTTCAAGGAAAGATCGTCAACAGAAATTGCATGATTTATCCTGGGTGCCGAATAATGAGAG
CCTGACTGTAATGGCTACGGGCAGCTATATCGGAGAAGGATTCGACCAGAAGCGTTTTGACACACTTCTGCTTGCCGCTC
CGGTCTCGTTTGAGGGTACTCTCTCGCAATATGTGGGGCGACTTCATCGCGAGAATGATGGCAAGACCGAGGTTCGTGTC
TATGATTACATCGATGTGACGGTGCCGTTATCTGCTGTCACGTATCGAAAACGGCTGAAGGCATACGCAAATCAAGGATA
TTCGGTAAATCCTGACCATGCTGAGAAAATGGACATGCTCAGTGCAAAGGCGGAAGCGTTGCGCGCTCGCATGACGGCTG
CGACGCAGGGCGAAGATGCTGCGGATGCGTTGCTCGACACACGGTCTGACGGATTATTCGAAGGCAGCATCGTTACGGCC
ACGAATTATGCAGAGATACTTCGCAAGGATATTGCCGGTTGCGCACGTTCCCTGATTATCTCGGCTGAATATGTGTCGCA
ACAGGGACTCAGCGCAATTGACGATGAATTGCTCCGACTGGCCGACAGGAAAGCGCTCATCGAAGTTTATGTTCGTTTGC
CGGCGACTGCTGCGGCGGCAACCAGAACACGAATAGAGCGGAATATCAATCGGCTGCGTGCTATTGGGTGCATTGTCCGG
ACCGCCGAATCGTGTTCCGATTTCGCCATAATCGATGACGGGTTGATTTGGTTTGGGGGCATCCCTTTGCTTGGCAATCC
AAGGAGTGACGACTGTGCGCTTCGATTCAAGGATACGAAAATCGGCGAAAATCTCGCAGATGGACTGAAACGACGATTGT
CTTGA

Upstream 100 bases:

>100_bases
TCGAACCCGAAACACTAACCTATGCCCGCCCCACCGCAAACAGCGAATAACCGCAAAAGTATTGTCGCAAGCTTTGGAAA
AGAGCGGTTGCACCCATGTG

Downstream 100 bases:

>100_bases
TTCAATATTCAATCAAGATAATCGCGCAGCACGAGGGCGTGATTGATATGCGGGTCTTTGGCGGCGTAGAGCAGGGTCAC
GTCGGGATGTTGCGCGCAGA

Product: helicase

Products: NA

Alternate protein names: Helicase; Type III Restriction Res Subunit; Type III Restriction Res Subunit Family; Superfamily II DNA/RNA Helicase; Type III Restriction- System Subunit Res; Type III Restriction; DNA Or RNA Helicases Of Superfamily II; DEAD/DEAH Box Family Helicase; ATP-Dependent Helicase; DNA Helicase; Nucleic Acid ATP-Dependent Helicase; DEAD/DEAH Box Helicase

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MLLHGGGSRKDRQQKLHDLSWVPNNESLTVMATGSYIGEGFDQKRFDTLLLAAPVSFEGTLSQYVGRLHRENDGKTEVRV
YDYIDVTVPLSAVTYRKRLKAYANQGYSVNPDHAEKMDMLSAKAEALRARMTAATQGEDAADALLDTRSDGLFEGSIVTA
TNYAEILRKDIAGCARSLIISAEYVSQQGLSAIDDELLRLADRKALIEVYVRLPATAAAATRTRIERNINRLRAIGCIVR
TAESCSDFAIIDDGLIWFGGIPLLGNPRSDDCALRFKDTKIGENLADGLKRRLS

Sequences:

>Translated_294_residues
MLLHGGGSRKDRQQKLHDLSWVPNNESLTVMATGSYIGEGFDQKRFDTLLLAAPVSFEGTLSQYVGRLHRENDGKTEVRV
YDYIDVTVPLSAVTYRKRLKAYANQGYSVNPDHAEKMDMLSAKAEALRARMTAATQGEDAADALLDTRSDGLFEGSIVTA
TNYAEILRKDIAGCARSLIISAEYVSQQGLSAIDDELLRLADRKALIEVYVRLPATAAAATRTRIERNINRLRAIGCIVR
TAESCSDFAIIDDGLIWFGGIPLLGNPRSDDCALRFKDTKIGENLADGLKRRLS
>Mature_294_residues
MLLHGGGSRKDRQQKLHDLSWVPNNESLTVMATGSYIGEGFDQKRFDTLLLAAPVSFEGTLSQYVGRLHRENDGKTEVRV
YDYIDVTVPLSAVTYRKRLKAYANQGYSVNPDHAEKMDMLSAKAEALRARMTAATQGEDAADALLDTRSDGLFEGSIVTA
TNYAEILRKDIAGCARSLIISAEYVSQQGLSAIDDELLRLADRKALIEVYVRLPATAAAATRTRIERNINRLRAIGCIVR
TAESCSDFAIIDDGLIWFGGIPLLGNPRSDDCALRFKDTKIGENLADGLKRRLS

Specific function: Unknown

COG id: COG1061

COG function: function code KL; DNA or RNA helicases of superfamily II

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32374; Mature: 32374

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLHGGGSRKDRQQKLHDLSWVPNNESLTVMATGSYIGEGFDQKRFDTLLLAAPVSFEGT
CEECCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCHHCCCCCHHHHHEEEEECCCCCCHH
LSQYVGRLHRENDGKTEVRVYDYIDVTVPLSAVTYRKRLKAYANQGYSVNPDHAEKMDML
HHHHHHHHHCCCCCCEEEEEEEEEEEEECHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
SAKAEALRARMTAATQGEDAADALLDTRSDGLFEGSIVTATNYAEILRKDIAGCARSLII
HHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHH
SAEYVSQQGLSAIDDELLRLADRKALIEVYVRLPATAAAATRTRIERNINRLRAIGCIVR
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
TAESCSDFAIIDDGLIWFGGIPLLGNPRSDDCALRFKDTKIGENLADGLKRRLS
HHHCCCCEEEEECCEEEECCCCCCCCCCCCCCEEEEECCHHCHHHHHHHHHHCC
>Mature Secondary Structure
MLLHGGGSRKDRQQKLHDLSWVPNNESLTVMATGSYIGEGFDQKRFDTLLLAAPVSFEGT
CEECCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCHHCCCCCHHHHHEEEEECCCCCCHH
LSQYVGRLHRENDGKTEVRVYDYIDVTVPLSAVTYRKRLKAYANQGYSVNPDHAEKMDML
HHHHHHHHHCCCCCCEEEEEEEEEEEEECHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
SAKAEALRARMTAATQGEDAADALLDTRSDGLFEGSIVTATNYAEILRKDIAGCARSLII
HHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHH
SAEYVSQQGLSAIDDELLRLADRKALIEVYVRLPATAAAATRTRIERNINRLRAIGCIVR
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
TAESCSDFAIIDDGLIWFGGIPLLGNPRSDDCALRFKDTKIGENLADGLKRRLS
HHHCCCCEEEEECCEEEECCCCCCCCCCCCCCEEEEECCHHCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA