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The map label for this gene is ybgF [H]

Identifier: 213692304

GI number: 213692304

Start: 1587764

End: 1589344

Strand: Direct

Name: ybgF [H]

Synonym: Blon_1427

Alternate gene names: 213692304

Gene position: 1587764-1589344 (Clockwise)

Preceding gene: 213692303

Following gene: 213692306

Centisome position: 56.05

GC content: 60.28

Gene sequence:

>1581_bases
ATGAGTCAGCCCGATACCGACATGGCAAAGCAGTCGCCGTCCTCGCAACAGGAAACGCAGATTAGGATGGATGCCCCGCA
GCATAAGCCAAATCAGGCAGACGAATCGAGCGCATTAGGCGAGCAGTCAACTGAGCCGACTAGCCAGCACAATAAACACG
CTCTGCACACGAACCTGAAGCGCGGCATGGAATCCCGCCACCTGCAAATGATCTCGTTGGGCGGCGTGATCGGCACCGGT
CTGTTCCTGAGCTCCGGATATACCATTCAGCAGGCAGGCCCGATCGGTACGATTCTGGCGTACAGCATTGGTGCGCTCAT
CGTCTATCTGGTCATGCTCACGCTCGGCGAGCTCTCCGTGGCCATGCCGGTGACCGGTTCCTTCCATGTGTATGCCGAAA
AGTTCATCGGCCCCGGCACCGGTTTCGTGATCGCGATCCAATATTGGCTCACTTGGACGGTGGCTCTCGGCTCCGAATTC
ACCGCCGCCGGTCTGCTCATGCAACGATGGCTTCCGGACAGCCCCACATGGGTATGGAGCGCGGCGTGCATCATCCTCAT
CTTTACCTTGAATGCCCTGTCCGTCCGATTCTTCGCCGAGGCGGAATTCTGGTTCGCTTCAATTAAGGTGTTCGCCATCT
GCGCGTTCATCATCATCGGTCTACTCGCCATCTTCGGCATTATTCCTATCGCCGGATATCAGCATGCGCCGATGTTCGGC
AATCTCATCAAGGACGGCGTCTTCCCCAACGGCTTCATGCCGGTGTTCGCCACGATTCTGACCGTCAACTTCGCGTTCTC
CGGCACCGAACTCATCGGCGTGACCGCCGGTGAGACGCGCGACCCGCAAACCGCCGTGCCGAAAGCCATCCACACCACGC
TGTGGCGTCTGGTGCTGTTCTTCATCGGCTCAATCACCGTGATGTGCGCGCTGATTCCGTGGCGCCAGGCCGGCGTGAGC
GAAAGCCCGTTCGTGCTCGTGTTCAACAGCATCGGCATCCCCTATGCGGGCGACATCATGAATTTCGTGGTGCTCACGGC
CGTGCTCTCCGCCTCGAATTCAGGCTTGTACGCCTCCACGCGCATGGTATGGTCGATGGGCAACGAGGGCATGATTCCGC
GCTGGTTCGCCAAGACGAACCGCCGAGGCGTGCCGATGCTCGCATTGTGCGCCGCGATGGCGGGAGGCCTTCTGGCGCTG
CTCTCGTCCGTGGTGGCCGCCTCGACCGTCTATCTGGTGCTGGTGGCCCTTTCCGGCCTGTCCGCCGTGGTGGTATGGAT
CGCCATCGCCTACTGCCAGATCGTGTTCCGCCGCCGTTGGCTGGCGGCCGGCCATGGCGTGGACGAGCTCAAATACCGTA
CGCCCGGCTACCCGTATGTGTCCTGGGCGGCGTTCATCCTGTGCACCGCATCGTTCGTGCTGGTGGTTTTCGATGCCGAG
CAGCGGTTCGCGCTCGTGGCCGAGCTTGTGTTCATCGTGGCCTGTTACGGCATTTACTTCCTGCAACAATGGTGGCGGAA
ACGCGGAAAAGCGTCTGACAGCGAAGACGATCTATCCATGCCGTGGGCCAATCAACACTGA

Upstream 100 bases:

>100_bases
TCAATGCATCGCCCGGCGCAACTATATCCCCGGTGCGGGTATACTATTTCGGGCCGTCACGATGACGTCCACGGAACGCA
CGCATGGCAAAGAGAGAAGC

Downstream 100 bases:

>100_bases
TTGAACGATTGCATTTTGTTCCGGGTTCCAGCTCCGGTTCTTTGCCTTGCGGATTGCGTATATCCGAACAATAGATACAA
CACAATAAAAAGCCATATTT

Product: amino acid permease-associated region

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 526; Mature: 525

Protein sequence:

>526_residues
MSQPDTDMAKQSPSSQQETQIRMDAPQHKPNQADESSALGEQSTEPTSQHNKHALHTNLKRGMESRHLQMISLGGVIGTG
LFLSSGYTIQQAGPIGTILAYSIGALIVYLVMLTLGELSVAMPVTGSFHVYAEKFIGPGTGFVIAIQYWLTWTVALGSEF
TAAGLLMQRWLPDSPTWVWSAACIILIFTLNALSVRFFAEAEFWFASIKVFAICAFIIIGLLAIFGIIPIAGYQHAPMFG
NLIKDGVFPNGFMPVFATILTVNFAFSGTELIGVTAGETRDPQTAVPKAIHTTLWRLVLFFIGSITVMCALIPWRQAGVS
ESPFVLVFNSIGIPYAGDIMNFVVLTAVLSASNSGLYASTRMVWSMGNEGMIPRWFAKTNRRGVPMLALCAAMAGGLLAL
LSSVVAASTVYLVLVALSGLSAVVVWIAIAYCQIVFRRRWLAAGHGVDELKYRTPGYPYVSWAAFILCTASFVLVVFDAE
QRFALVAELVFIVACYGIYFLQQWWRKRGKASDSEDDLSMPWANQH

Sequences:

>Translated_526_residues
MSQPDTDMAKQSPSSQQETQIRMDAPQHKPNQADESSALGEQSTEPTSQHNKHALHTNLKRGMESRHLQMISLGGVIGTG
LFLSSGYTIQQAGPIGTILAYSIGALIVYLVMLTLGELSVAMPVTGSFHVYAEKFIGPGTGFVIAIQYWLTWTVALGSEF
TAAGLLMQRWLPDSPTWVWSAACIILIFTLNALSVRFFAEAEFWFASIKVFAICAFIIIGLLAIFGIIPIAGYQHAPMFG
NLIKDGVFPNGFMPVFATILTVNFAFSGTELIGVTAGETRDPQTAVPKAIHTTLWRLVLFFIGSITVMCALIPWRQAGVS
ESPFVLVFNSIGIPYAGDIMNFVVLTAVLSASNSGLYASTRMVWSMGNEGMIPRWFAKTNRRGVPMLALCAAMAGGLLAL
LSSVVAASTVYLVLVALSGLSAVVVWIAIAYCQIVFRRRWLAAGHGVDELKYRTPGYPYVSWAAFILCTASFVLVVFDAE
QRFALVAELVFIVACYGIYFLQQWWRKRGKASDSEDDLSMPWANQH
>Mature_525_residues
SQPDTDMAKQSPSSQQETQIRMDAPQHKPNQADESSALGEQSTEPTSQHNKHALHTNLKRGMESRHLQMISLGGVIGTGL
FLSSGYTIQQAGPIGTILAYSIGALIVYLVMLTLGELSVAMPVTGSFHVYAEKFIGPGTGFVIAIQYWLTWTVALGSEFT
AAGLLMQRWLPDSPTWVWSAACIILIFTLNALSVRFFAEAEFWFASIKVFAICAFIIIGLLAIFGIIPIAGYQHAPMFGN
LIKDGVFPNGFMPVFATILTVNFAFSGTELIGVTAGETRDPQTAVPKAIHTTLWRLVLFFIGSITVMCALIPWRQAGVSE
SPFVLVFNSIGIPYAGDIMNFVVLTAVLSASNSGLYASTRMVWSMGNEGMIPRWFAKTNRRGVPMLALCAAMAGGLLALL
SSVVAASTVYLVLVALSGLSAVVVWIAIAYCQIVFRRRWLAAGHGVDELKYRTPGYPYVSWAAFILCTASFVLVVFDAEQ
RFALVAELVFIVACYGIYFLQQWWRKRGKASDSEDDLSMPWANQH

Specific function: Transporter For The Intake Of S-Methylmethionine. [C]

COG id: COG0833

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Homo sapiens, GI4507047, Length=431, Percent_Identity=23.6658932714617, Blast_Score=70, Evalue=6e-12,
Organism=Homo sapiens, GI181337167, Length=351, Percent_Identity=25.0712250712251, Blast_Score=67, Evalue=4e-11,
Organism=Escherichia coli, GI87081708, Length=470, Percent_Identity=54.8936170212766, Blast_Score=506, Evalue=1e-144,
Organism=Escherichia coli, GI1788480, Length=419, Percent_Identity=43.436754176611, Blast_Score=343, Evalue=2e-95,
Organism=Escherichia coli, GI1786789, Length=427, Percent_Identity=37.4707259953162, Blast_Score=287, Evalue=1e-78,
Organism=Escherichia coli, GI87081915, Length=484, Percent_Identity=34.7107438016529, Blast_Score=285, Evalue=5e-78,
Organism=Escherichia coli, GI1786302, Length=431, Percent_Identity=36.1948955916473, Blast_Score=272, Evalue=4e-74,
Organism=Escherichia coli, GI48994972, Length=464, Percent_Identity=36.2068965517241, Blast_Score=269, Evalue=3e-73,
Organism=Escherichia coli, GI1786602, Length=453, Percent_Identity=35.3200883002208, Blast_Score=262, Evalue=4e-71,
Organism=Escherichia coli, GI1790653, Length=464, Percent_Identity=34.9137931034483, Blast_Score=259, Evalue=2e-70,
Organism=Escherichia coli, GI1789017, Length=452, Percent_Identity=33.1858407079646, Blast_Score=246, Evalue=3e-66,
Organism=Caenorhabditis elegans, GI17540018, Length=505, Percent_Identity=23.1683168316832, Blast_Score=74, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6324553, Length=407, Percent_Identity=35.6265356265356, Blast_Score=242, Evalue=1e-64,
Organism=Saccharomyces cerevisiae, GI6324061, Length=561, Percent_Identity=28.5204991087344, Blast_Score=239, Evalue=8e-64,
Organism=Saccharomyces cerevisiae, GI6320772, Length=514, Percent_Identity=27.431906614786, Blast_Score=233, Evalue=5e-62,
Organism=Saccharomyces cerevisiae, GI6322892, Length=469, Percent_Identity=32.6226012793177, Blast_Score=220, Evalue=5e-58,
Organism=Saccharomyces cerevisiae, GI6321629, Length=522, Percent_Identity=29.3103448275862, Blast_Score=218, Evalue=1e-57,
Organism=Saccharomyces cerevisiae, GI6324059, Length=441, Percent_Identity=30.3854875283447, Blast_Score=207, Evalue=3e-54,
Organism=Saccharomyces cerevisiae, GI6321053, Length=459, Percent_Identity=28.5403050108932, Blast_Score=206, Evalue=7e-54,
Organism=Saccharomyces cerevisiae, GI6324924, Length=503, Percent_Identity=27.2365805168986, Blast_Score=206, Evalue=8e-54,
Organism=Saccharomyces cerevisiae, GI6320717, Length=468, Percent_Identity=27.991452991453, Blast_Score=200, Evalue=5e-52,
Organism=Saccharomyces cerevisiae, GI6324990, Length=493, Percent_Identity=26.369168356998, Blast_Score=199, Evalue=7e-52,
Organism=Saccharomyces cerevisiae, GI6319824, Length=464, Percent_Identity=28.448275862069, Blast_Score=198, Evalue=2e-51,
Organism=Saccharomyces cerevisiae, GI6322967, Length=464, Percent_Identity=30.6034482758621, Blast_Score=198, Evalue=2e-51,
Organism=Saccharomyces cerevisiae, GI6319543, Length=479, Percent_Identity=26.5135699373695, Blast_Score=197, Evalue=4e-51,
Organism=Saccharomyces cerevisiae, GI6324981, Length=485, Percent_Identity=30.9278350515464, Blast_Score=190, Evalue=5e-49,
Organism=Saccharomyces cerevisiae, GI6319608, Length=511, Percent_Identity=25.2446183953033, Blast_Score=185, Evalue=1e-47,
Organism=Saccharomyces cerevisiae, GI6319542, Length=477, Percent_Identity=26.2054507337526, Blast_Score=175, Evalue=2e-44,
Organism=Saccharomyces cerevisiae, GI6320251, Length=463, Percent_Identity=24.622030237581, Blast_Score=164, Evalue=4e-41,
Organism=Saccharomyces cerevisiae, GI6320364, Length=534, Percent_Identity=22.2846441947566, Blast_Score=115, Evalue=1e-26,
Organism=Drosophila melanogaster, GI161077963, Length=404, Percent_Identity=20.5445544554455, Blast_Score=65, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293
- InterPro:   IPR004840 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 57450; Mature: 57318

Theoretical pI: Translated: 7.55; Mature: 7.55

Prosite motif: PS00218 AMINO_ACID_PERMEASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQPDTDMAKQSPSSQQETQIRMDAPQHKPNQADESSALGEQSTEPTSQHNKHALHTNLK
CCCCCCCHHHCCCCCHHHHEEECCCCCCCCCCCCHHHHCCCCCCCCCHHCCCHHHHHHHH
RGMESRHLQMISLGGVIGTGLFLSSGYTIQQAGPIGTILAYSIGALIVYLVMLTLGELSV
HCHHHHCEEHHHHCCHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCHHE
AMPVTGSFHVYAEKFIGPGTGFVIAIQYWLTWTVALGSEFTAAGLLMQRWLPDSPTWVWS
EECCCCCHHHHHHHHCCCCCCHHEEHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHH
AACIILIFTLNALSVRFFAEAEFWFASIKVFAICAFIIIGLLAIFGIIPIAGYQHAPMFG
HHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
NLIKDGVFPNGFMPVFATILTVNFAFSGTELIGVTAGETRDPQTAVPKAIHTTLWRLVLF
HHHHCCCCCCCCHHHHHHHHHHHHEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHH
FIGSITVMCALIPWRQAGVSESPFVLVFNSIGIPYAGDIMNFVVLTAVLSASNSGLYAST
HHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEHH
RMVWSMGNEGMIPRWFAKTNRRGVPMLALCAAMAGGLLALLSSVVAASTVYLVLVALSGL
HHHEECCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAVVVWIAIAYCQIVFRRRWLAAGHGVDELKYRTPGYPYVSWAAFILCTASFVLVVFDAE
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHEEEECCH
QRFALVAELVFIVACYGIYFLQQWWRKRGKASDSEDDLSMPWANQH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SQPDTDMAKQSPSSQQETQIRMDAPQHKPNQADESSALGEQSTEPTSQHNKHALHTNLK
CCCCCCHHHCCCCCHHHHEEECCCCCCCCCCCCHHHHCCCCCCCCCHHCCCHHHHHHHH
RGMESRHLQMISLGGVIGTGLFLSSGYTIQQAGPIGTILAYSIGALIVYLVMLTLGELSV
HCHHHHCEEHHHHCCHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCHHE
AMPVTGSFHVYAEKFIGPGTGFVIAIQYWLTWTVALGSEFTAAGLLMQRWLPDSPTWVWS
EECCCCCHHHHHHHHCCCCCCHHEEHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHH
AACIILIFTLNALSVRFFAEAEFWFASIKVFAICAFIIIGLLAIFGIIPIAGYQHAPMFG
HHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
NLIKDGVFPNGFMPVFATILTVNFAFSGTELIGVTAGETRDPQTAVPKAIHTTLWRLVLF
HHHHCCCCCCCCHHHHHHHHHHHHEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHH
FIGSITVMCALIPWRQAGVSESPFVLVFNSIGIPYAGDIMNFVVLTAVLSASNSGLYAST
HHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEHH
RMVWSMGNEGMIPRWFAKTNRRGVPMLALCAAMAGGLLALLSSVVAASTVYLVLVALSGL
HHHEECCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAVVVWIAIAYCQIVFRRRWLAAGHGVDELKYRTPGYPYVSWAAFILCTASFVLVVFDAE
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHEEEECCH
QRFALVAELVFIVACYGIYFLQQWWRKRGKASDSEDDLSMPWANQH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]