| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692300
Identifier: 213692300
GI number: 213692300
Start: 1584680
End: 1585003
Strand: Reverse
Name: 213692300
Synonym: Blon_1423
Alternate gene names: NA
Gene position: 1585003-1584680 (Counterclockwise)
Preceding gene: 213692301
Following gene: 213692298
Centisome position: 55.95
GC content: 61.73
Gene sequence:
>324_bases TTGCGCGGCGCCGCCTGGTCATCGTGCCGACGGCGAGCATCGGTTCCGAACATTGACGCCGAACCGTCGAAGCCGTTCCT GTGGAAAATCCGTGTCCAGGCCATGCAGAACCAGGTGGCCATCGTCATGTGCAACCGGGTCGGCAAGGAAGGCGATGTGA CGTTCGCCGGCCAATCGGTGGTGGTGGACCCGTACGGCAACGTCGTCAGCAAGGCCGACGACCAAGAACAGTTGATTATC GCCGACATCGATCTCACACAGACCGCAGCAGCGCGCAAACAGCGGCCATTCCTGGAACTGCGACGACCCGAATGGTACGC CTGA
Upstream 100 bases:
>100_bases AACACCGCGGAACAAATCGCCATGTGTTTTGCGGCCCACCGCGATCCCGACTGGATGACGCTATTTGAGTGAACCCCGTG AAGGCATCCGCACATGCGCG
Downstream 100 bases:
>100_bases CAAGAACAAACCGACGTCAGCCCGGAATCTTTTCGACGATGGTGTTCAAGGTGTCGAAAGTCTCATCGATTTGGTCCACT ACCTGCTTGCCCTGGTTGAC
Product: amidohydrolase-like protein
Products: NA
Alternate protein names: Carbon-Nitrogen Family Hydrolase; Hydrolase; Amidohydrolase-Like Protein
Number of amino acids: Translated: 107; Mature: 107
Protein sequence:
>107_residues MRGAAWSSCRRRASVPNIDAEPSKPFLWKIRVQAMQNQVAIVMCNRVGKEGDVTFAGQSVVVDPYGNVVSKADDQEQLII ADIDLTQTAAARKQRPFLELRRPEWYA
Sequences:
>Translated_107_residues MRGAAWSSCRRRASVPNIDAEPSKPFLWKIRVQAMQNQVAIVMCNRVGKEGDVTFAGQSVVVDPYGNVVSKADDQEQLII ADIDLTQTAAARKQRPFLELRRPEWYA >Mature_107_residues MRGAAWSSCRRRASVPNIDAEPSKPFLWKIRVQAMQNQVAIVMCNRVGKEGDVTFAGQSVVVDPYGNVVSKADDQEQLII ADIDLTQTAAARKQRPFLELRRPEWYA
Specific function: Unknown
COG id: COG0388
COG function: function code R; Predicted amidohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12033; Mature: 12033
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGAAWSSCRRRASVPNIDAEPSKPFLWKIRVQAMQNQVAIVMCNRVGKEGDVTFAGQSV CCCCCCHHHHHCCCCCCCCCCCCCCEEEEEEEEHHCCCEEEEEECCCCCCCCEEECCCEE VVDPYGNVVSKADDQEQLIIADIDLTQTAAARKQRPFLELRRPEWYA EECCCCCCCCCCCCCCCEEEEECCCCHHHHHHHCCCCEEECCCCCCC >Mature Secondary Structure MRGAAWSSCRRRASVPNIDAEPSKPFLWKIRVQAMQNQVAIVMCNRVGKEGDVTFAGQSV CCCCCCHHHHHCCCCCCCCCCCCCCEEEEEEEEHHCCCEEEEEECCCCCCCCEEECCCEE VVDPYGNVVSKADDQEQLIIADIDLTQTAAARKQRPFLELRRPEWYA EECCCCCCCCCCCCCCCEEEEECCCCHHHHHHHCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA