| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692287
Identifier: 213692287
GI number: 213692287
Start: 1571753
End: 1572376
Strand: Reverse
Name: 213692287
Synonym: Blon_1409
Alternate gene names: NA
Gene position: 1572376-1571753 (Counterclockwise)
Preceding gene: 213692288
Following gene: 213692286
Centisome position: 55.51
GC content: 60.1
Gene sequence:
>624_bases ATGAAGTCCCTATTGCGTATTGAGCGTGTGGCGGTGATCCGCTGGCCGACGCTCGCCTTCGTGGCTGTGCTGCTGTTTCC GTTGTTCTTTTTGCGTTACGGGAACACGGGTGCGGTGGTGCAGTCGGCGATGGTGATGGCGCTTCCCGTAACCGCTGCCG GTCTCGTCTTCTCCCATGCGAGGGTGCCCTCCTCGTACCGTTCCTTCAGCATCCACGACCGGCTCCTGCTTCGCTTCAGC GTGAAGTCGCTGTCGCTCGGCGTCGTGATCAACGTCTGCCTGACTTTGCTGTACGGGCTTGCCGTCGGGCTCGTCGTCAA CGAAACGCTTTCGTCGCGTACCATTCTGATGCTTGCGTTCACCGCCGTCGTTCTTTCCCTGGCATGCTTCGTTCTGCGGC TCTGGGTCAGTCCTCTCGTCGCCTGGAACGTCGTCGCCTTCTTCATCGTCGCCGGACTTACGGTGAGTTCCGGCATGTTC GAGGACGCGCCGATGCTGTACGCCGTCATACCAACCACATGGGTGTTGAACGGGGTGAAATTCGCCGGTTACGTGATTCC GGTCGGCGTCGCCATCGCCGCGATAAGCGCATGTCTGCTGTTCAAGGCGGTGAAACGTGTCTGA
Upstream 100 bases:
>100_bases GAGCGTCCGTCGGCCCCGTGATGGTCGTCGTCCCGATCGTGGTGCTTTTGGTTGCCTATGTGCTGTTGAGCCGGTTCCGT CGCGAAGGAGTGGAGAGGAA
Downstream 100 bases:
>100_bases CCGAAGCCGTATACGGGTGCACTGTTTCGGATCGTAATCGTCCGGCAGCCAGCTTTCTCACCGTATTCCGTTGCGGGAGT GAGCCTGCCGCTTTCCGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MKSLLRIERVAVIRWPTLAFVAVLLFPLFFLRYGNTGAVVQSAMVMALPVTAAGLVFSHARVPSSYRSFSIHDRLLLRFS VKSLSLGVVINVCLTLLYGLAVGLVVNETLSSRTILMLAFTAVVLSLACFVLRLWVSPLVAWNVVAFFIVAGLTVSSGMF EDAPMLYAVIPTTWVLNGVKFAGYVIPVGVAIAAISACLLFKAVKRV
Sequences:
>Translated_207_residues MKSLLRIERVAVIRWPTLAFVAVLLFPLFFLRYGNTGAVVQSAMVMALPVTAAGLVFSHARVPSSYRSFSIHDRLLLRFS VKSLSLGVVINVCLTLLYGLAVGLVVNETLSSRTILMLAFTAVVLSLACFVLRLWVSPLVAWNVVAFFIVAGLTVSSGMF EDAPMLYAVIPTTWVLNGVKFAGYVIPVGVAIAAISACLLFKAVKRV >Mature_207_residues MKSLLRIERVAVIRWPTLAFVAVLLFPLFFLRYGNTGAVVQSAMVMALPVTAAGLVFSHARVPSSYRSFSIHDRLLLRFS VKSLSLGVVINVCLTLLYGLAVGLVVNETLSSRTILMLAFTAVVLSLACFVLRLWVSPLVAWNVVAFFIVAGLTVSSGMF EDAPMLYAVIPTTWVLNGVKFAGYVIPVGVAIAAISACLLFKAVKRV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22410; Mature: 22410
Theoretical pI: Translated: 10.83; Mature: 10.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSLLRIERVAVIRWPTLAFVAVLLFPLFFLRYGNTGAVVQSAMVMALPVTAAGLVFSHA CCHHHHHHHHHHEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH RVPSSYRSFSIHDRLLLRFSVKSLSLGVVINVCLTLLYGLAVGLVVNETLSSRTILMLAF HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TAVVLSLACFVLRLWVSPLVAWNVVAFFIVAGLTVSSGMFEDAPMLYAVIPTTWVLNGVK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEHHHHHHHHCCHH FAGYVIPVGVAIAAISACLLFKAVKRV HHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKSLLRIERVAVIRWPTLAFVAVLLFPLFFLRYGNTGAVVQSAMVMALPVTAAGLVFSHA CCHHHHHHHHHHEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH RVPSSYRSFSIHDRLLLRFSVKSLSLGVVINVCLTLLYGLAVGLVVNETLSSRTILMLAF HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TAVVLSLACFVLRLWVSPLVAWNVVAFFIVAGLTVSSGMFEDAPMLYAVIPTTWVLNGVK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEHHHHHHHHCCHH FAGYVIPVGVAIAAISACLLFKAVKRV HHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA