Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is 213692241

Identifier: 213692241

GI number: 213692241

Start: 1531436

End: 1531879

Strand: Reverse

Name: 213692241

Synonym: Blon_1361

Alternate gene names: NA

Gene position: 1531879-1531436 (Counterclockwise)

Preceding gene: 213692242

Following gene: 213692240

Centisome position: 54.08

GC content: 54.5

Gene sequence:

>444_bases
ATGACCAACCCGATTCCTAGCGCAGGCGAAACCACCATTATCGGCCTGCCCGCGATTAATGTACTGCCCATTACCACCAC
CGGCGATCGACCGCTGACTCAAGAGGATCTGGACACCATCACCAGATTGTCCGAGGGAACGGCATTGCTGATTTCCGCCA
GGGGAGCGGTCTCAGGTTCTCGTTACTTGCTTGACGAGGATGAAATCACCGTCGGTCGTGATCCGCGAGCTGATATTCTG
CTCGACGACTCCACCGTATCCCGTCAGCATGCCGTGTTCCGCAGGGTCAACGGTCAGTTCTTTGTGGTTGACGCAGGAAG
TCTGAACGGCACCTACGTGAACCGTCAGCGTGTTGATCAGGCGACGTTGAAGAACGGCGACGAAATCATGATCGGTAAAT
TCCGCCTCGTGTTCTTCACGAAATCTGCCATTATTTCCCAATAG

Upstream 100 bases:

>100_bases
CGGGTCCAACGTCAACGTACAGCCTTCTGACAGCATCATTATCGACGAAGTACGCGAAGCTACGCAAAACCAGTATGCAA
AGACGGTAGAATAGGAGATT

Downstream 100 bases:

>100_bases
TCCACACCTAGCATGGGGTTAGACTGATTGCAGAAATTGCAATCATGTGATTACACCAGTGTGAGTCATATGCGAGACAC
GCATGAGTTAGGGGGGGTGC

Product: FHA domain containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MTNPIPSAGETTIIGLPAINVLPITTTGDRPLTQEDLDTITRLSEGTALLISARGAVSGSRYLLDEDEITVGRDPRADIL
LDDSTVSRQHAVFRRVNGQFFVVDAGSLNGTYVNRQRVDQATLKNGDEIMIGKFRLVFFTKSAIISQ

Sequences:

>Translated_147_residues
MTNPIPSAGETTIIGLPAINVLPITTTGDRPLTQEDLDTITRLSEGTALLISARGAVSGSRYLLDEDEITVGRDPRADIL
LDDSTVSRQHAVFRRVNGQFFVVDAGSLNGTYVNRQRVDQATLKNGDEIMIGKFRLVFFTKSAIISQ
>Mature_146_residues
TNPIPSAGETTIIGLPAINVLPITTTGDRPLTQEDLDTITRLSEGTALLISARGAVSGSRYLLDEDEITVGRDPRADILL
DDSTVSRQHAVFRRVNGQFFVVDAGSLNGTYVNRQRVDQATLKNGDEIMIGKFRLVFFTKSAIISQ

Specific function: Unknown

COG id: COG1716

COG function: function code T; FOG: FHA domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FHA domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000253
- InterPro:   IPR008984 [H]

Pfam domain/function: PF00498 FHA [H]

EC number: NA

Molecular weight: Translated: 16006; Mature: 15875

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: PS50006 FHA_DOMAIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNPIPSAGETTIIGLPAINVLPITTTGDRPLTQEDLDTITRLSEGTALLISARGAVSGS
CCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCC
RYLLDEDEITVGRDPRADILLDDSTVSRQHAVFRRVNGQFFVVDAGSLNGTYVNRQRVDQ
EEEECCCCEEECCCCCCEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCCEEECHHHCCH
ATLKNGDEIMIGKFRLVFFTKSAIISQ
HHHCCCCEEEEEEEEEEEEECCHHCCC
>Mature Secondary Structure 
TNPIPSAGETTIIGLPAINVLPITTTGDRPLTQEDLDTITRLSEGTALLISARGAVSGS
CCCCCCCCCEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCC
RYLLDEDEITVGRDPRADILLDDSTVSRQHAVFRRVNGQFFVVDAGSLNGTYVNRQRVDQ
EEEECCCCEEECCCCCCEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCCEEECHHHCCH
ATLKNGDEIMIGKFRLVFFTKSAIISQ
HHHCCCCEEEEEEEEEEEEECCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]