| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692239
Identifier: 213692239
GI number: 213692239
Start: 1530106
End: 1530528
Strand: Reverse
Name: 213692239
Synonym: Blon_1359
Alternate gene names: NA
Gene position: 1530528-1530106 (Counterclockwise)
Preceding gene: 213692240
Following gene: 213692236
Centisome position: 54.03
GC content: 58.39
Gene sequence:
>423_bases ATGGTCGCCGTCATCTTTGCTGTGTCCATCATCACTATAACGGTCAGCCGAGGCCATCTGTTCACGCCGAAACGCCGGCG ACCGCCGGTCGATCCGGTCGACTGGTCGATGGTGAAAACGCATTTCATGTCGTTTGCGGCGGCGCTGATTCCGTTTCCCG TGTTGACGTTTACAGCGGATTTGATGGATGCGGATATACTCGCGTTCTATGATCGTGCGCAATTGCCCGGTGCAATCATC GTATTCGCGCTGGTGCTGTTGGAACTTGTCGCCATGTATCTGCAGGCGCGCAACGCTTCGGAATCCGCGATGGACGGCCG TCTGGGCGTCGCCGACCGCCGGGATGATGACGATGCCGGAATCGTGCCCGATAGAGCGAGGAGCGGGAATGAGGGAGACA TGGACAAACCGGGCGAAGACTGA
Upstream 100 bases:
>100_bases CTGCCATCTTATGTTTTTTATATGTTGCGGTGATTATTATGACTGATTGGAGGACCGGGTGAACGGGATTGTTGTCGGAT TGTTGCCGGGCGTTCTGTGG
Downstream 100 bases:
>100_bases TTGGATGGCTGATGCGGGGGAGGGACATGCAACCGTCGTCCGGGTTGGGTGAAGGGAGACCATGACATATATCGGTATCG TCATTTAACTATGCCTCATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MVAVIFAVSIITITVSRGHLFTPKRRRPPVDPVDWSMVKTHFMSFAAALIPFPVLTFTADLMDADILAFYDRAQLPGAII VFALVLLELVAMYLQARNASESAMDGRLGVADRRDDDDAGIVPDRARSGNEGDMDKPGED
Sequences:
>Translated_140_residues MVAVIFAVSIITITVSRGHLFTPKRRRPPVDPVDWSMVKTHFMSFAAALIPFPVLTFTADLMDADILAFYDRAQLPGAII VFALVLLELVAMYLQARNASESAMDGRLGVADRRDDDDAGIVPDRARSGNEGDMDKPGED >Mature_140_residues MVAVIFAVSIITITVSRGHLFTPKRRRPPVDPVDWSMVKTHFMSFAAALIPFPVLTFTADLMDADILAFYDRAQLPGAII VFALVLLELVAMYLQARNASESAMDGRLGVADRRDDDDAGIVPDRARSGNEGDMDKPGED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15337; Mature: 15337
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAVIFAVSIITITVSRGHLFTPKRRRPPVDPVDWSMVKTHFMSFAAALIPFPVLTFTAD CCHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LMDADILAFYDRAQLPGAIIVFALVLLELVAMYLQARNASESAMDGRLGVADRRDDDDAG HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCC IVPDRARSGNEGDMDKPGED CCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MVAVIFAVSIITITVSRGHLFTPKRRRPPVDPVDWSMVKTHFMSFAAALIPFPVLTFTAD CCHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LMDADILAFYDRAQLPGAIIVFALVLLELVAMYLQARNASESAMDGRLGVADRRDDDDAG HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCC IVPDRARSGNEGDMDKPGED CCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA