| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692226
Identifier: 213692226
GI number: 213692226
Start: 1516569
End: 1517687
Strand: Direct
Name: 213692226
Synonym: Blon_1346
Alternate gene names: NA
Gene position: 1516569-1517687 (Clockwise)
Preceding gene: 213692225
Following gene: 213692227
Centisome position: 53.54
GC content: 66.13
Gene sequence:
>1119_bases ATGAGTCTTACGCAATGGGATGACGGCCGCATCCGTCTGATGCCGGGGGATTGCCGCGACCTCATCGCCATGCTGCCGGA CAACAGCGTGGATTCCGTCATTACCGACCCGCCGTACGAGATCGGTTTCATGAACCTGGGCTTCGATTCGACGGGCGTCG CGTTCGACGTGGATCTGTGGCGGGATATCCTGCGCGTCCTGAAGCCGGGAGGGCACGTGGCCGCGTTCGCCGCCAGCCGC ACATATCATCGGCTCGCCTGCGCGATCGAGGACGCGGGCTTCGAAATCCGCGACCAGATCGACTGGGTGTACGCAAGCGG CATGCCACACGGTTCGGATGCGAGGCTGCTCGTGGACAGGGAGCCTGGCGCGACACGAACCGGGCAGGCGGAGCAATGGG CCGGCTGGTACAGCCAGCTGAAGCCCGCGCATGAGCCCATCTGCCTCGCCAGAAAACCGTTGGACGGCAATCTCGCCCAC AATCTGCTCGAACACGGGACCGGCGCGCTGCACATCGACTCATGCCGCGTCCCGTTCCGCAACCCGGCGGATGAGACCGA GGCGAAGAACAAGAACCGGCATGGACGGTTCGGTTCCGGACCGCGGGACAACCATGTATACGGCGCGGATAATGCGAACC GCACCGACTATAAGGCGGACGCCCGGTTCGCGCCGAACATGCTGTTCGACCGGACCATGGCCGGAGAGCTTGACCGGCAG TCCGGGGTGACGGTCAGCCGGAAAGGCAAACCACGCGCGAGCGCGAGACCGGACGCCGGCTGGGGCATGACCCGGACGGG CGCGGAATACGATGATGCCGGCGGCGCGTCCCGCTTCTACCCGGTGTTCAGGTATTGTCCGAAGGCGGGACCGGGGGAGA GGCCGACCGTGGACGGCATCCTCCATCCGACGGTGAAACCGTTGGAACTGATGCGCTGGCTGGTGCGTCTGGTCACGCCG CCGGACGGGCTCGTGTTGGAGCCGTTCGCCGGCAGCGGCGCCACGTTGGAGGCGTGCCGGATCGAGGACGTGCGTTGCGT GGCGGCGGAGATGGATTCGGATTACGTGCGGCTCATAGCCCGCCGGATGGCGAGGCCGACGAACCCGGTGCTGTTCTGA
Upstream 100 bases:
>100_bases CCTATCCGGGCGACAGCCGTCGGCTCGCCTACGTGGATGCGCGTCCCCGCGCGCTCATGCCCGGCGCGCGCCTGCATGGC GGGAACGCATACGTGGAGCC
Downstream 100 bases:
>100_bases CATCGCCGGGGACGCATGCATGCCGGCGTCGATGATATCGGGACGATACGAGGAGTGTGCATCATGTTTAAAACTCGCTA TTATTACGCTTTTTATTGGA
Product: DNA methylase N-4/N-6 domain protein
Products: NA
Alternate protein names: Methylase; Site-Specific DNA-Methyltransferase; DNA Methylase N-4/N-6 Domain-Containing Protein; Site-Specific DNA Methyltransferase; DNA Methylase; DNA Methylase
Number of amino acids: Translated: 372; Mature: 371
Protein sequence:
>372_residues MSLTQWDDGRIRLMPGDCRDLIAMLPDNSVDSVITDPPYEIGFMNLGFDSTGVAFDVDLWRDILRVLKPGGHVAAFAASR TYHRLACAIEDAGFEIRDQIDWVYASGMPHGSDARLLVDREPGATRTGQAEQWAGWYSQLKPAHEPICLARKPLDGNLAH NLLEHGTGALHIDSCRVPFRNPADETEAKNKNRHGRFGSGPRDNHVYGADNANRTDYKADARFAPNMLFDRTMAGELDRQ SGVTVSRKGKPRASARPDAGWGMTRTGAEYDDAGGASRFYPVFRYCPKAGPGERPTVDGILHPTVKPLELMRWLVRLVTP PDGLVLEPFAGSGATLEACRIEDVRCVAAEMDSDYVRLIARRMARPTNPVLF
Sequences:
>Translated_372_residues MSLTQWDDGRIRLMPGDCRDLIAMLPDNSVDSVITDPPYEIGFMNLGFDSTGVAFDVDLWRDILRVLKPGGHVAAFAASR TYHRLACAIEDAGFEIRDQIDWVYASGMPHGSDARLLVDREPGATRTGQAEQWAGWYSQLKPAHEPICLARKPLDGNLAH NLLEHGTGALHIDSCRVPFRNPADETEAKNKNRHGRFGSGPRDNHVYGADNANRTDYKADARFAPNMLFDRTMAGELDRQ SGVTVSRKGKPRASARPDAGWGMTRTGAEYDDAGGASRFYPVFRYCPKAGPGERPTVDGILHPTVKPLELMRWLVRLVTP PDGLVLEPFAGSGATLEACRIEDVRCVAAEMDSDYVRLIARRMARPTNPVLF >Mature_371_residues SLTQWDDGRIRLMPGDCRDLIAMLPDNSVDSVITDPPYEIGFMNLGFDSTGVAFDVDLWRDILRVLKPGGHVAAFAASRT YHRLACAIEDAGFEIRDQIDWVYASGMPHGSDARLLVDREPGATRTGQAEQWAGWYSQLKPAHEPICLARKPLDGNLAHN LLEHGTGALHIDSCRVPFRNPADETEAKNKNRHGRFGSGPRDNHVYGADNANRTDYKADARFAPNMLFDRTMAGELDRQS GVTVSRKGKPRASARPDAGWGMTRTGAEYDDAGGASRFYPVFRYCPKAGPGERPTVDGILHPTVKPLELMRWLVRLVTPP DGLVLEPFAGSGATLEACRIEDVRCVAAEMDSDYVRLIARRMARPTNPVLF
Specific function: Unknown
COG id: COG0863
COG function: function code L; DNA modification methylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41104; Mature: 40973
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLTQWDDGRIRLMPGDCRDLIAMLPDNSVDSVITDPPYEIGFMNLGFDSTGVAFDVDLW CCCCCCCCCEEEECCCCHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEHHHH RDILRVLKPGGHVAAFAASRTYHRLACAIEDAGFEIRDQIDWVYASGMPHGSDARLLVDR HHHHHHHCCCCCEEEEECCCHHHHEEEEECCCCCEEECCEEEEEECCCCCCCCCEEEEEC EPGATRTGQAEQWAGWYSQLKPAHEPICLARKPLDGNLAHNLLEHGTGALHIDSCRVPFR CCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHCCCCEEEECCCCCCCC NPADETEAKNKNRHGRFGSGPRDNHVYGADNANRTDYKADARFAPNMLFDRTMAGELDRQ CCCCHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHH SGVTVSRKGKPRASARPDAGWGMTRTGAEYDDAGGASRFYPVFRYCPKAGPGERPTVDGI CCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCC LHPTVKPLELMRWLVRLVTPPDGLVLEPFAGSGATLEACRIEDVRCVAAEMDSDYVRLIA CCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCEEEEEECCCCEEEEHHCCCHHHHHHH RRMARPTNPVLF HHHCCCCCCCCC >Mature Secondary Structure SLTQWDDGRIRLMPGDCRDLIAMLPDNSVDSVITDPPYEIGFMNLGFDSTGVAFDVDLW CCCCCCCCEEEECCCCHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEHHHH RDILRVLKPGGHVAAFAASRTYHRLACAIEDAGFEIRDQIDWVYASGMPHGSDARLLVDR HHHHHHHCCCCCEEEEECCCHHHHEEEEECCCCCEEECCEEEEEECCCCCCCCCEEEEEC EPGATRTGQAEQWAGWYSQLKPAHEPICLARKPLDGNLAHNLLEHGTGALHIDSCRVPFR CCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHCCCCEEEECCCCCCCC NPADETEAKNKNRHGRFGSGPRDNHVYGADNANRTDYKADARFAPNMLFDRTMAGELDRQ CCCCHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHH SGVTVSRKGKPRASARPDAGWGMTRTGAEYDDAGGASRFYPVFRYCPKAGPGERPTVDGI CCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCC LHPTVKPLELMRWLVRLVTPPDGLVLEPFAGSGATLEACRIEDVRCVAAEMDSDYVRLIA CCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCEEEEEECCCCEEEEHHCCCHHHHHHH RRMARPTNPVLF HHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA