Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

Click here to switch to the map view.

The map label for this gene is 213692222

Identifier: 213692222

GI number: 213692222

Start: 1514622

End: 1515158

Strand: Direct

Name: 213692222

Synonym: Blon_1342

Alternate gene names: NA

Gene position: 1514622-1515158 (Clockwise)

Preceding gene: 213692221

Following gene: 213692223

Centisome position: 53.47

GC content: 62.57

Gene sequence:

>537_bases
ATGAGCGCATACGACTGGTTCATCGCCCGATGCAAGGCGGTCGTCAACCATCCCAGGCCGCCCGAACCTCCGATGCGCCT
CCGCCTGCACGAGGCGGGTCATGCGGTAGTCGGCCATCGGTTCGGATACACGCAACAAGGCATCATGCTGCGGGAGGATG
ATACCGGCCAGACCAGCCAGCAGTACGCCACCGGTCCGGACGATGATATGTCCGTCCGATTGCAGACGGAGATGATCATC
TCCATGACCGGTTTCGCCGTGACCATGGAATATCCGGAATACCGGACCGACGCGCTCCGCATCGGCGGCGACGTGCAGGC
GGAGCTGGTGGACGCGGCGATCATCCACCGGATCGACCCGTCGATGGGCTCCACCGAGGAGATCATCGACTCATTGTGGG
TCAGGGCGCGCCTCGTCGCAAGGAACAACAGCCCCCTGATCCGGACGGTCGCCGGCAGGCTGAATCGTTACGGCTCCTAC
ACGGGCGAGGAAATCCAGCGGATTCTCGACGAAAGTATGAAGGAGCTTGACCGGTGA

Upstream 100 bases:

>100_bases
CCGAAACCGGATGGTACGGTCCCGTATGCAAAACCCACGCCAGCCGCGATATGGTGCCGCTGTCCGTCGTATTGGACGTG
ATGATGGGAGCCGGGCGATG

Downstream 100 bases:

>100_bases
ACGCATTGGAATGGCCCGCCGACCTGACCGACTTCCGGCTCCCCGTCAAATGGGATGGGCAGCCGGTTGATTGGCATGGC
TGGCATCCACCCATCGAAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 177

Protein sequence:

>178_residues
MSAYDWFIARCKAVVNHPRPPEPPMRLRLHEAGHAVVGHRFGYTQQGIMLREDDTGQTSQQYATGPDDDMSVRLQTEMII
SMTGFAVTMEYPEYRTDALRIGGDVQAELVDAAIIHRIDPSMGSTEEIIDSLWVRARLVARNNSPLIRTVAGRLNRYGSY
TGEEIQRILDESMKELDR

Sequences:

>Translated_178_residues
MSAYDWFIARCKAVVNHPRPPEPPMRLRLHEAGHAVVGHRFGYTQQGIMLREDDTGQTSQQYATGPDDDMSVRLQTEMII
SMTGFAVTMEYPEYRTDALRIGGDVQAELVDAAIIHRIDPSMGSTEEIIDSLWVRARLVARNNSPLIRTVAGRLNRYGSY
TGEEIQRILDESMKELDR
>Mature_177_residues
SAYDWFIARCKAVVNHPRPPEPPMRLRLHEAGHAVVGHRFGYTQQGIMLREDDTGQTSQQYATGPDDDMSVRLQTEMIIS
MTGFAVTMEYPEYRTDALRIGGDVQAELVDAAIIHRIDPSMGSTEEIIDSLWVRARLVARNNSPLIRTVAGRLNRYGSYT
GEEIQRILDESMKELDR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20181; Mature: 20050

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAYDWFIARCKAVVNHPRPPEPPMRLRLHEAGHAVVGHRFGYTQQGIMLREDDTGQTSQ
CCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEECCCCCCCCCCEEEEECCCCCCCC
QYATGPDDDMSVRLQTEMIISMTGFAVTMEYPEYRTDALRIGGDVQAELVDAAIIHRIDP
CCCCCCCCCCEEEEEHEEEEEECCEEEEEECCCCCCHHEEECCCCHHHHHHHHHHHHCCC
SMGSTEEIIDSLWVRARLVARNNSPLIRTVAGRLNRYGSYTGEEIQRILDESMKELDR
CCCCHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SAYDWFIARCKAVVNHPRPPEPPMRLRLHEAGHAVVGHRFGYTQQGIMLREDDTGQTSQ
CHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEECCCCCCCCCCEEEEECCCCCCCC
QYATGPDDDMSVRLQTEMIISMTGFAVTMEYPEYRTDALRIGGDVQAELVDAAIIHRIDP
CCCCCCCCCCEEEEEHEEEEEECCEEEEEECCCCCCHHEEECCCCHHHHHHHHHHHHCCC
SMGSTEEIIDSLWVRARLVARNNSPLIRTVAGRLNRYGSYTGEEIQRILDESMKELDR
CCCCHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA