| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692222
Identifier: 213692222
GI number: 213692222
Start: 1514622
End: 1515158
Strand: Direct
Name: 213692222
Synonym: Blon_1342
Alternate gene names: NA
Gene position: 1514622-1515158 (Clockwise)
Preceding gene: 213692221
Following gene: 213692223
Centisome position: 53.47
GC content: 62.57
Gene sequence:
>537_bases ATGAGCGCATACGACTGGTTCATCGCCCGATGCAAGGCGGTCGTCAACCATCCCAGGCCGCCCGAACCTCCGATGCGCCT CCGCCTGCACGAGGCGGGTCATGCGGTAGTCGGCCATCGGTTCGGATACACGCAACAAGGCATCATGCTGCGGGAGGATG ATACCGGCCAGACCAGCCAGCAGTACGCCACCGGTCCGGACGATGATATGTCCGTCCGATTGCAGACGGAGATGATCATC TCCATGACCGGTTTCGCCGTGACCATGGAATATCCGGAATACCGGACCGACGCGCTCCGCATCGGCGGCGACGTGCAGGC GGAGCTGGTGGACGCGGCGATCATCCACCGGATCGACCCGTCGATGGGCTCCACCGAGGAGATCATCGACTCATTGTGGG TCAGGGCGCGCCTCGTCGCAAGGAACAACAGCCCCCTGATCCGGACGGTCGCCGGCAGGCTGAATCGTTACGGCTCCTAC ACGGGCGAGGAAATCCAGCGGATTCTCGACGAAAGTATGAAGGAGCTTGACCGGTGA
Upstream 100 bases:
>100_bases CCGAAACCGGATGGTACGGTCCCGTATGCAAAACCCACGCCAGCCGCGATATGGTGCCGCTGTCCGTCGTATTGGACGTG ATGATGGGAGCCGGGCGATG
Downstream 100 bases:
>100_bases ACGCATTGGAATGGCCCGCCGACCTGACCGACTTCCGGCTCCCCGTCAAATGGGATGGGCAGCCGGTTGATTGGCATGGC TGGCATCCACCCATCGAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MSAYDWFIARCKAVVNHPRPPEPPMRLRLHEAGHAVVGHRFGYTQQGIMLREDDTGQTSQQYATGPDDDMSVRLQTEMII SMTGFAVTMEYPEYRTDALRIGGDVQAELVDAAIIHRIDPSMGSTEEIIDSLWVRARLVARNNSPLIRTVAGRLNRYGSY TGEEIQRILDESMKELDR
Sequences:
>Translated_178_residues MSAYDWFIARCKAVVNHPRPPEPPMRLRLHEAGHAVVGHRFGYTQQGIMLREDDTGQTSQQYATGPDDDMSVRLQTEMII SMTGFAVTMEYPEYRTDALRIGGDVQAELVDAAIIHRIDPSMGSTEEIIDSLWVRARLVARNNSPLIRTVAGRLNRYGSY TGEEIQRILDESMKELDR >Mature_177_residues SAYDWFIARCKAVVNHPRPPEPPMRLRLHEAGHAVVGHRFGYTQQGIMLREDDTGQTSQQYATGPDDDMSVRLQTEMIIS MTGFAVTMEYPEYRTDALRIGGDVQAELVDAAIIHRIDPSMGSTEEIIDSLWVRARLVARNNSPLIRTVAGRLNRYGSYT GEEIQRILDESMKELDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20181; Mature: 20050
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAYDWFIARCKAVVNHPRPPEPPMRLRLHEAGHAVVGHRFGYTQQGIMLREDDTGQTSQ CCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEECCCCCCCCCCEEEEECCCCCCCC QYATGPDDDMSVRLQTEMIISMTGFAVTMEYPEYRTDALRIGGDVQAELVDAAIIHRIDP CCCCCCCCCCEEEEEHEEEEEECCEEEEEECCCCCCHHEEECCCCHHHHHHHHHHHHCCC SMGSTEEIIDSLWVRARLVARNNSPLIRTVAGRLNRYGSYTGEEIQRILDESMKELDR CCCCHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure SAYDWFIARCKAVVNHPRPPEPPMRLRLHEAGHAVVGHRFGYTQQGIMLREDDTGQTSQ CHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEECCCCCCCCCCEEEEECCCCCCCC QYATGPDDDMSVRLQTEMIISMTGFAVTMEYPEYRTDALRIGGDVQAELVDAAIIHRIDP CCCCCCCCCCEEEEEHEEEEEECCEEEEEECCCCCCHHEEECCCCHHHHHHHHHHHHCCC SMGSTEEIIDSLWVRARLVARNNSPLIRTVAGRLNRYGSYTGEEIQRILDESMKELDR CCCCHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA