| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692216
Identifier: 213692216
GI number: 213692216
Start: 1512289
End: 1512756
Strand: Direct
Name: 213692216
Synonym: Blon_1336
Alternate gene names: NA
Gene position: 1512289-1512756 (Clockwise)
Preceding gene: 213692215
Following gene: 213692217
Centisome position: 53.39
GC content: 63.25
Gene sequence:
>468_bases ATGACCGATTACTCGCAATGGCTGGAAACGGTGTCCGAGGCGGTGCGGCCGGCGAAAGGACGCCATCATCCTCGCCGTGC TGTCCGTGTTCTGCTTCGCCGGCATGGTCATCGCATTCGTGGGCGGCATCGCCTTCATAGGCCGTCCGAAGAATTCGTGA AGGCCAACGTCCGGATCACGGCCGTGATGGCCCTGGGATGCGTCGCGTCCGTCATCGCGTTGCTGTTCGCGACGGCATCC GGACCCAATGGCGTGGAACCGTTCGCAACGCATACCGAGAACATGTACGGTATCGAACATCTGCGCTGCGATGGAGCGGA TTGCCCGGCATACGACCTGCCCGCGGACAACACCCCCGCAGGCTGGCTGAAGGACGGCCGGCTCGAACAGGGCCGCTTCA TCGTGGATGGTCACAGGGTCGGGTTGGCCGGCCCTGACGGGGAACTATTGAAGCCGGTGAAACGGTGA
Upstream 100 bases:
>100_bases CGGCCATCAACGCCCGCGACTTCAAGCCGGGAGCCCGGCATGCGCTGTCCTTCGGCCTGCGGCTCCTGGCCGACAGGCTC GACGAATACAAGGAGGAGTG
Downstream 100 bases:
>100_bases GCGGGTTCTGGATCGGCTATCTCGCCGGCCTCGCCACACTGCCTGCCGTCGCGGTGCTCGTGTTCCTTGGGCTCGTGGTG TCCGCACTGTTTCCGGCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MTDYSQWLETVSEAVRPAKGRHHPRRAVRVLLRRHGHRIRGRHRLHRPSEEFVKANVRITAVMALGCVASVIALLFATAS GPNGVEPFATHTENMYGIEHLRCDGADCPAYDLPADNTPAGWLKDGRLEQGRFIVDGHRVGLAGPDGELLKPVKR
Sequences:
>Translated_155_residues MTDYSQWLETVSEAVRPAKGRHHPRRAVRVLLRRHGHRIRGRHRLHRPSEEFVKANVRITAVMALGCVASVIALLFATAS GPNGVEPFATHTENMYGIEHLRCDGADCPAYDLPADNTPAGWLKDGRLEQGRFIVDGHRVGLAGPDGELLKPVKR >Mature_154_residues TDYSQWLETVSEAVRPAKGRHHPRRAVRVLLRRHGHRIRGRHRLHRPSEEFVKANVRITAVMALGCVASVIALLFATASG PNGVEPFATHTENMYGIEHLRCDGADCPAYDLPADNTPAGWLKDGRLEQGRFIVDGHRVGLAGPDGELLKPVKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17200; Mature: 17069
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDYSQWLETVSEAVRPAKGRHHPRRAVRVLLRRHGHRIRGRHRLHRPSEEFVKANVRIT CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHCCHHHCCCCHHHHHHHCCHHH AVMALGCVASVIALLFATASGPNGVEPFATHTENMYGIEHLRCDGADCPAYDLPADNTPA HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCHHHEECCCCCCCCCCCCCCCCCC GWLKDGRLEQGRFIVDGHRVGLAGPDGELLKPVKR CCCCCCCCCCCCEEECCCEEECCCCCHHHHHHCCC >Mature Secondary Structure TDYSQWLETVSEAVRPAKGRHHPRRAVRVLLRRHGHRIRGRHRLHRPSEEFVKANVRIT CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHCCHHHCCCCHHHHHHHCCHHH AVMALGCVASVIALLFATASGPNGVEPFATHTENMYGIEHLRCDGADCPAYDLPADNTPA HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCHHHEECCCCCCCCCCCCCCCCCC GWLKDGRLEQGRFIVDGHRVGLAGPDGELLKPVKR CCCCCCCCCCCCEEECCCEEECCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA