| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
Click here to switch to the map view.
The map label for this gene is 213692196
Identifier: 213692196
GI number: 213692196
Start: 1498924
End: 1500249
Strand: Direct
Name: 213692196
Synonym: Blon_1316
Alternate gene names: NA
Gene position: 1498924-1500249 (Clockwise)
Preceding gene: 213692194
Following gene: 213692197
Centisome position: 52.91
GC content: 64.4
Gene sequence:
>1326_bases ATGAGCGACCATGGGAAACCGGATAAGCCGGGACTGTGGCGGGATACGAACGAGAAAACGGTCGTGGCCTGCATGGAATC CGGCAATCTCAGGATGCGCGACCCGGATACCGGCATGGTCCTGTCCGGGGAGCGGCTGGAACGGGCCGCGCCGTTCCGTC GAACCGAGTGGGCGGGAATAGACCTGACCCGGGCCAGGTTCTCCGCCATGCCCGACGCGGCGGGATGCTGGTGCGACGCG AACGGCAGCCTCTGGCTCATCACGGGCGGCGACGGGATCGACGGGCTGAAGGAACCAGGCCGCGAATGGGAATGCGCGCC GTGTTCCGGCATCACCGTGAGGATGCTCCACGAATGGGGCCCGTGGGCGCGCTGCGACTTCAATCCGAAGGATGATGAAG CCGTTCGTTTTGACTGGTGCAAACCGTGGATCGCCGATCATGGCCGGGATGCGGATATGTCCGAATCCGCATCGTCTCTG CTGGCTCATATCGAGGAGATTCGGAAGAGTCTGCCGGAGGAGCCCGGTCTGTGGAGGTTCGAGCATGCCGGGTCCGGCGT CGTCTTCGGGGACGGCGGCGGGAAGAGCCTGTTCCTGTTCGATTCGGGCGGAGGTTTCCTGGACGGGGGTTTGGGTCCAT GCACACGGCTCCGACCCGGCATTCCGGTCGGTTCCGCGCCGATCCCGAACCTGCCGGGCGTATGGATGGACAAGGGCGGG AACCTGTTGGCAGTGTTTGGGGAACGTCGGGTGAGGATTTGGGACAACCATGACTGGATGGTGGAAGAGCTTGACGACGA TTCCGGGGAACTGTCCGCGCACGGCCCGTACACCCGGTATTCGCTCCAAACCGTCGAACAGGTCCCATGGAAGCCGACCG CCGACGGTACGGCTCCGATCCGTGAGGGGACCCGTACCGTGCATCTCCCGGCCGTCCGATCGTTCGGCCGGCTGGAACGG GACAAGTGGCTGGCCGTCAAGAACCTCGAAGAGTCGGCCGAACTCGTGGAGGCGTGCAAACAGTATTTGAAGGCCTGCGA TCCGACCGATCCGAGCCATATCGGCGACCAGTTCGACGATCATGCGGACTGTCTCGCCTGCTACGGGGTGAACGTGGGCG GCGAGCTTGGCGACGACCGGGACAAGGCGAAGGCCGGCTGGCATGACCATGTGCGCGACCAGCGTCGCCAAACCATGCTC GGCGAGCTCGCCGACGTGTTGCAGACGGTCGGCAACCTGATCACGGCGTTCGGCATCACGGATGAGGAGGTCGGACGGGC GATGTGCGACTGTCTGGAACGCAACAGGCGGAAAGGACGGCTCTGA
Upstream 100 bases:
>100_bases CTTCTGACCATGTTTCACATTATATCATATCAATCTGTGAAAGGAGGACGGTTTGCTTCCTCCCCGCCCTAAAGGACGAG GTCTCCGCAAACCAAAAACG
Downstream 100 bases:
>100_bases TGGAGACCACGAGAATCTGGGATTCCCGCAACAGCAGGCATGCGACGATTGAACACGAGACGTTGAGACCATGCCCGTTC TGCGGCGGCACGCCACGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 441; Mature: 440
Protein sequence:
>441_residues MSDHGKPDKPGLWRDTNEKTVVACMESGNLRMRDPDTGMVLSGERLERAAPFRRTEWAGIDLTRARFSAMPDAAGCWCDA NGSLWLITGGDGIDGLKEPGREWECAPCSGITVRMLHEWGPWARCDFNPKDDEAVRFDWCKPWIADHGRDADMSESASSL LAHIEEIRKSLPEEPGLWRFEHAGSGVVFGDGGGKSLFLFDSGGGFLDGGLGPCTRLRPGIPVGSAPIPNLPGVWMDKGG NLLAVFGERRVRIWDNHDWMVEELDDDSGELSAHGPYTRYSLQTVEQVPWKPTADGTAPIREGTRTVHLPAVRSFGRLER DKWLAVKNLEESAELVEACKQYLKACDPTDPSHIGDQFDDHADCLACYGVNVGGELGDDRDKAKAGWHDHVRDQRRQTML GELADVLQTVGNLITAFGITDEEVGRAMCDCLERNRRKGRL
Sequences:
>Translated_441_residues MSDHGKPDKPGLWRDTNEKTVVACMESGNLRMRDPDTGMVLSGERLERAAPFRRTEWAGIDLTRARFSAMPDAAGCWCDA NGSLWLITGGDGIDGLKEPGREWECAPCSGITVRMLHEWGPWARCDFNPKDDEAVRFDWCKPWIADHGRDADMSESASSL LAHIEEIRKSLPEEPGLWRFEHAGSGVVFGDGGGKSLFLFDSGGGFLDGGLGPCTRLRPGIPVGSAPIPNLPGVWMDKGG NLLAVFGERRVRIWDNHDWMVEELDDDSGELSAHGPYTRYSLQTVEQVPWKPTADGTAPIREGTRTVHLPAVRSFGRLER DKWLAVKNLEESAELVEACKQYLKACDPTDPSHIGDQFDDHADCLACYGVNVGGELGDDRDKAKAGWHDHVRDQRRQTML GELADVLQTVGNLITAFGITDEEVGRAMCDCLERNRRKGRL >Mature_440_residues SDHGKPDKPGLWRDTNEKTVVACMESGNLRMRDPDTGMVLSGERLERAAPFRRTEWAGIDLTRARFSAMPDAAGCWCDAN GSLWLITGGDGIDGLKEPGREWECAPCSGITVRMLHEWGPWARCDFNPKDDEAVRFDWCKPWIADHGRDADMSESASSLL AHIEEIRKSLPEEPGLWRFEHAGSGVVFGDGGGKSLFLFDSGGGFLDGGLGPCTRLRPGIPVGSAPIPNLPGVWMDKGGN LLAVFGERRVRIWDNHDWMVEELDDDSGELSAHGPYTRYSLQTVEQVPWKPTADGTAPIREGTRTVHLPAVRSFGRLERD KWLAVKNLEESAELVEACKQYLKACDPTDPSHIGDQFDDHADCLACYGVNVGGELGDDRDKAKAGWHDHVRDQRRQTMLG ELADVLQTVGNLITAFGITDEEVGRAMCDCLERNRRKGRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48783; Mature: 48652
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDHGKPDKPGLWRDTNEKTVVACMESGNLRMRDPDTGMVLSGERLERAAPFRRTEWAGI CCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEECCCCCEEEECHHHHHCCCCCCCCCCCC DLTRARFSAMPDAAGCWCDANGSLWLITGGDGIDGLKEPGREWECAPCSGITVRMLHEWG CHHHHHHHCCCCCCCEEECCCCCEEEEECCCCCCHHHCCCCCCCCCCCCCCEEEEEHHCC PWARCDFNPKDDEAVRFDWCKPWIADHGRDADMSESASSLLAHIEEIRKSLPEEPGLWRF CEEECCCCCCCCCEEEEECCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEE EHAGSGVVFGDGGGKSLFLFDSGGGFLDGGLGPCTRLRPGIPVGSAPIPNLPGVWMDKGG ECCCCEEEEECCCCCEEEEEECCCCEECCCCCCHHHCCCCCCCCCCCCCCCCCCEEECCC NLLAVFGERRVRIWDNHDWMVEELDDDSGELSAHGPYTRYSLQTVEQVPWKPTADGTAPI CEEEEECCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHH REGTRTVHLPAVRSFGRLERDKWLAVKNLEESAELVEACKQYLKACDPTDPSHIGDQFDD HCCCEEEECHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCC HADCLACYGVNVGGELGDDRDKAKAGWHDHVRDQRRQTMLGELADVLQTVGNLITAFGIT HHCEEEEECCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DEEVGRAMCDCLERNRRKGRL HHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SDHGKPDKPGLWRDTNEKTVVACMESGNLRMRDPDTGMVLSGERLERAAPFRRTEWAGI CCCCCCCCCCCCCCCCCCEEEEEECCCCEEEECCCCCEEEECHHHHHCCCCCCCCCCCC DLTRARFSAMPDAAGCWCDANGSLWLITGGDGIDGLKEPGREWECAPCSGITVRMLHEWG CHHHHHHHCCCCCCCEEECCCCCEEEEECCCCCCHHHCCCCCCCCCCCCCCEEEEEHHCC PWARCDFNPKDDEAVRFDWCKPWIADHGRDADMSESASSLLAHIEEIRKSLPEEPGLWRF CEEECCCCCCCCCEEEEECCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEE EHAGSGVVFGDGGGKSLFLFDSGGGFLDGGLGPCTRLRPGIPVGSAPIPNLPGVWMDKGG ECCCCEEEEECCCCCEEEEEECCCCEECCCCCCHHHCCCCCCCCCCCCCCCCCCEEECCC NLLAVFGERRVRIWDNHDWMVEELDDDSGELSAHGPYTRYSLQTVEQVPWKPTADGTAPI CEEEEECCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHH REGTRTVHLPAVRSFGRLERDKWLAVKNLEESAELVEACKQYLKACDPTDPSHIGDQFDD HCCCEEEECHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCC HADCLACYGVNVGGELGDDRDKAKAGWHDHVRDQRRQTMLGELADVLQTVGNLITAFGIT HHCEEEEECCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DEEVGRAMCDCLERNRRKGRL HHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA