Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is 213692193

Identifier: 213692193

GI number: 213692193

Start: 1495720

End: 1496400

Strand: Direct

Name: 213692193

Synonym: Blon_1313

Alternate gene names: NA

Gene position: 1495720-1496400 (Clockwise)

Preceding gene: 213692192

Following gene: 213692194

Centisome position: 52.8

GC content: 61.09

Gene sequence:

>681_bases
ATGATCGACCCGAAGAAAAACGGAAACAGGACGCTGCGCGTCCGCTACGATAGCGGCGCCATATTCGTCGGTCCGGCGAT
CATCACCGACGAGGGGGATACGCTCGTCCTGCTGGGCGGAGCCTCATCCCTGCTCGTCCGACGCGCGGACGGAAGCCTGC
CATTGCACGTGGCTGCGGTGGAAACGCCGCCGGAGGATGATGGTCCGTGCCTGGATGCGGCTTTGGCCGTGTTCGACGAA
ACCATCGAGGACGGCGGCGGCCGCCGGACGGCCATGTCCTGCGCGATACGCGCCTACGATGAGCGGAATCCCGGACACCC
GACATTGTTCGTCGATCTTTGCAACGACAGGTCGTTCGAAAGAATGGTGAGAAAGACCGGGGGAAGAGCATTCAGGCTGG
ATTCGCAGGACGAAGGCCGTGAAATAGATCCCCTGTCCTTCGCGGATCATGACTTTTCCCGTGAGGCGGCGCGTTCCGGC
AATCCTCTAATCAGGATTGATCCGGTCAAGGGCGGGCCCATCGCCGTCTACCTCCCTGATGGTTCAATCAGGGTCGGGGA
CGAAATGGATTTCCTGCTCAGGGATGAAGCCGACGCGCGAACCAGCACGAATAAACCGAATCCAGGGAAGCCAGCTCGAA
ATCCGGAAGGAGCAGAGGTCTCCCCGGATCTCCGACGGTGA

Upstream 100 bases:

>100_bases
CCGGGAGCCTAGGGCCGTTCATCCTATACGGGGCGGTATCCATTGCAACCGGCTGGGCCGGATTATCGAAAGTTGATCTG
CATGTGAAAAGGACGAACGA

Downstream 100 bases:

>100_bases
AGCCATGATCCCGATAATATCCGCGCATTACGGGTTTGCAGCTGCCGGCAGCCCAGCGGCATTCCCTCGGAGCCGCCGAA
TCCAGCAGATACAGGAGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MIDPKKNGNRTLRVRYDSGAIFVGPAIITDEGDTLVLLGGASSLLVRRADGSLPLHVAAVETPPEDDGPCLDAALAVFDE
TIEDGGGRRTAMSCAIRAYDERNPGHPTLFVDLCNDRSFERMVRKTGGRAFRLDSQDEGREIDPLSFADHDFSREAARSG
NPLIRIDPVKGGPIAVYLPDGSIRVGDEMDFLLRDEADARTSTNKPNPGKPARNPEGAEVSPDLRR

Sequences:

>Translated_226_residues
MIDPKKNGNRTLRVRYDSGAIFVGPAIITDEGDTLVLLGGASSLLVRRADGSLPLHVAAVETPPEDDGPCLDAALAVFDE
TIEDGGGRRTAMSCAIRAYDERNPGHPTLFVDLCNDRSFERMVRKTGGRAFRLDSQDEGREIDPLSFADHDFSREAARSG
NPLIRIDPVKGGPIAVYLPDGSIRVGDEMDFLLRDEADARTSTNKPNPGKPARNPEGAEVSPDLRR
>Mature_226_residues
MIDPKKNGNRTLRVRYDSGAIFVGPAIITDEGDTLVLLGGASSLLVRRADGSLPLHVAAVETPPEDDGPCLDAALAVFDE
TIEDGGGRRTAMSCAIRAYDERNPGHPTLFVDLCNDRSFERMVRKTGGRAFRLDSQDEGREIDPLSFADHDFSREAARSG
NPLIRIDPVKGGPIAVYLPDGSIRVGDEMDFLLRDEADARTSTNKPNPGKPARNPEGAEVSPDLRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24497; Mature: 24497

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDPKKNGNRTLRVRYDSGAIFVGPAIITDEGDTLVLLGGASSLLVRRADGSLPLHVAAV
CCCCCCCCCEEEEEEECCCEEEECCEEEECCCCEEEEECCCCEEEEEECCCCCCEEEEEE
ETPPEDDGPCLDAALAVFDETIEDGGGRRTAMSCAIRAYDERNPGHPTLFVDLCNDRSFE
CCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEHEEEEEECCCCCCCCCEEEEEECCCCHHH
RMVRKTGGRAFRLDSQDEGREIDPLSFADHDFSREAARSGNPLIRIDPVKGGPIAVYLPD
HHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEECCCCCEEEEEECC
GSIRVGDEMDFLLRDEADARTSTNKPNPGKPARNPEGAEVSPDLRR
CCEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIDPKKNGNRTLRVRYDSGAIFVGPAIITDEGDTLVLLGGASSLLVRRADGSLPLHVAAV
CCCCCCCCCEEEEEEECCCEEEECCEEEECCCCEEEEECCCCEEEEEECCCCCCEEEEEE
ETPPEDDGPCLDAALAVFDETIEDGGGRRTAMSCAIRAYDERNPGHPTLFVDLCNDRSFE
CCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEHEEEEEECCCCCCCCCEEEEEECCCCHHH
RMVRKTGGRAFRLDSQDEGREIDPLSFADHDFSREAARSGNPLIRIDPVKGGPIAVYLPD
HHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEECCCCCEEEEEECC
GSIRVGDEMDFLLRDEADARTSTNKPNPGKPARNPEGAEVSPDLRR
CCEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA