Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is femB [H]

Identifier: 213692183

GI number: 213692183

Start: 1489214

End: 1490485

Strand: Direct

Name: femB [H]

Synonym: Blon_1303

Alternate gene names: 213692183

Gene position: 1489214-1490485 (Clockwise)

Preceding gene: 213692182

Following gene: 213692184

Centisome position: 52.57

GC content: 62.03

Gene sequence:

>1272_bases
TTGATTTACGACGTTACACCCATCACCTTCAACCAACTGGATCTGCTGTCGGCCGGACACCCGCAGGGCGGGTTCCAGCA
GACCGGGCACATGGCGCATCTCGCCGCCACGGACGTGGCAGCCACGGATCTGATCGGCGTGACCCGCAACGGCGTTCTAT
CGGCCGGCTGCCTGATCGCGTGGACGCGGGGCCGGCTTGGCCTGGAAGGCAGCATCTGGCTCGGACCGTTGTGCGCGCTC
GATGATCCGAAACTCCTCGAACACATGACCCGGGGTATCCGTCTCGCCGCACGCCGCCGTCATGCCGTGTCCGTCACATG
CTGGCCGAACATCGAATACCAAAGGCATGACGCTGTCGGGAACCCGATCGGTGTCCCCGACACGACGATCCTCGACGCCT
ACCGGTCATGCAGCTGGAGGCATCAGGGATTCGACACCGGATACGGGAAAGTCATCAACCGTTGGAATTGGATCAGAACC
TTCGACGGCATCAAGGATGAGCGGACGCTGCTCGCCTCATACAAGCCGCGCACCCGGTGGAGCGTGAACCGGGCGAGAAC
ATCAGGCGTGCGAGTACGCGAACTCGGTGCGGATGAGCTTGGCACGTTCGTGAACATCGAACGGAAGACCGCAGGACGAC
GCGGCTTCACGGCCCGCGACGAAGACTACTATCGCCGGTTCAAGGAGACATTCGGAAGCCGAGCCCATTTCCTGCTCGCC
GAAATCCATGCCGACGAGCTTCTGACCGGCCTGACCGCCGAACATGACAGGCTCGCCGATCGGCTGGATTCGCTGAGAAC
CAAATACGAAGCGCATGCCACGAACCGGCTCAAACGCCAGATTGACGATACAACCCACAACCTGACCGCCCTGGAACGCC
GCCTCGACGAGGCGCGCGCCTTGACCGCACATGGCAGCGTGATCCCAGCCGCCTGCGCCCTGTTCGTGGAACACCGGCGT
GAAACCGTGTACCTGACAGCCGGCGCTCTCCCCGAATACCGGGCATACCAGGCTCCCGCCCTGTTGGTCCACGAAGGAAT
GCTCCGCCTGTGCGTCAACAGTACCCAACCGCGACGCTTCAACATGTACGGCATCACCGGCGTATTCAACGACCCGGATG
ACGAAGGCCGTGGGGTATTGGAATTCAAACAGGGATTCAACGGGCATGCCGAGGAACTGGCTGGAGCGTTCATCCTGCCG
ACCAGCACGATCCGATACAAGCTCAGCGAAGCCGCGCACACAATCAAACCGTTGAGGGAAGCCGGCCGATGA

Upstream 100 bases:

>100_bases
TGGACGAACCCAAACACGGGAAGGGCAGGGGGATATCGATGACGATCCGCTTCACATACGCTCTTCATGTCGGAACCGGT
CTCATAACGGAAGGACTGAA

Downstream 100 bases:

>100_bases
CGAATCCTCTTGACGAAAGCGCGAAAGCCGCAACCCGATGGGTGGAGACCACGCCGGACGCCGTATTGCACTCCTGCGGA
CTGGTGAACGCCTACCAGTT

Product: Methicillin resistance protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MIYDVTPITFNQLDLLSAGHPQGGFQQTGHMAHLAATDVAATDLIGVTRNGVLSAGCLIAWTRGRLGLEGSIWLGPLCAL
DDPKLLEHMTRGIRLAARRRHAVSVTCWPNIEYQRHDAVGNPIGVPDTTILDAYRSCSWRHQGFDTGYGKVINRWNWIRT
FDGIKDERTLLASYKPRTRWSVNRARTSGVRVRELGADELGTFVNIERKTAGRRGFTARDEDYYRRFKETFGSRAHFLLA
EIHADELLTGLTAEHDRLADRLDSLRTKYEAHATNRLKRQIDDTTHNLTALERRLDEARALTAHGSVIPAACALFVEHRR
ETVYLTAGALPEYRAYQAPALLVHEGMLRLCVNSTQPRRFNMYGITGVFNDPDDEGRGVLEFKQGFNGHAEELAGAFILP
TSTIRYKLSEAAHTIKPLREAGR

Sequences:

>Translated_423_residues
MIYDVTPITFNQLDLLSAGHPQGGFQQTGHMAHLAATDVAATDLIGVTRNGVLSAGCLIAWTRGRLGLEGSIWLGPLCAL
DDPKLLEHMTRGIRLAARRRHAVSVTCWPNIEYQRHDAVGNPIGVPDTTILDAYRSCSWRHQGFDTGYGKVINRWNWIRT
FDGIKDERTLLASYKPRTRWSVNRARTSGVRVRELGADELGTFVNIERKTAGRRGFTARDEDYYRRFKETFGSRAHFLLA
EIHADELLTGLTAEHDRLADRLDSLRTKYEAHATNRLKRQIDDTTHNLTALERRLDEARALTAHGSVIPAACALFVEHRR
ETVYLTAGALPEYRAYQAPALLVHEGMLRLCVNSTQPRRFNMYGITGVFNDPDDEGRGVLEFKQGFNGHAEELAGAFILP
TSTIRYKLSEAAHTIKPLREAGR
>Mature_423_residues
MIYDVTPITFNQLDLLSAGHPQGGFQQTGHMAHLAATDVAATDLIGVTRNGVLSAGCLIAWTRGRLGLEGSIWLGPLCAL
DDPKLLEHMTRGIRLAARRRHAVSVTCWPNIEYQRHDAVGNPIGVPDTTILDAYRSCSWRHQGFDTGYGKVINRWNWIRT
FDGIKDERTLLASYKPRTRWSVNRARTSGVRVRELGADELGTFVNIERKTAGRRGFTARDEDYYRRFKETFGSRAHFLLA
EIHADELLTGLTAEHDRLADRLDSLRTKYEAHATNRLKRQIDDTTHNLTALERRLDEARALTAHGSVIPAACALFVEHRR
ETVYLTAGALPEYRAYQAPALLVHEGMLRLCVNSTQPRRFNMYGITGVFNDPDDEGRGVLEFKQGFNGHAEELAGAFILP
TSTIRYKLSEAAHTIKPLREAGR

Specific function: Catalyzes the incorporation of amino acid(s) into the interchain peptide bridge of peptidoglycan, using aminoacyl-tRNA as amino acid donor [H]

COG id: COG2348

COG function: function code V; Uncharacterized protein involved in methicillin resistance

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the femABX family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016181
- InterPro:   IPR003447 [H]

Pfam domain/function: PF02388 FemAB [H]

EC number: NA

Molecular weight: Translated: 47500; Mature: 47500

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYDVTPITFNQLDLLSAGHPQGGFQQTGHMAHLAATDVAATDLIGVTRNGVLSAGCLIA
CEEECCCCCCCCHHHHCCCCCCCCCHHCCCEEEHHHHHHHHHHHHHCCCCCCEECCEEEE
WTRGRLGLEGSIWLGPLCALDDPKLLEHMTRGIRLAARRRHAVSVTCWPNIEYQRHDAVG
EECCCCCCCCCEEECCEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEECCCCCC
NPIGVPDTTILDAYRSCSWRHQGFDTGYGKVINRWNWIRTFDGIKDERTLLASYKPRTRW
CCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHCCCHHHHHCCCCCCHHHHCCCCCCCCE
SVNRARTSGVRVRELGADELGTFVNIERKTAGRRGFTARDEDYYRRFKETFGSRAHFLLA
EHHHHHCCCCEEEECCHHHHCCEEEEEHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEHHH
EIHADELLTGLTAEHDRLADRLDSLRTKYEAHATNRLKRQIDDTTHNLTALERRLDEARA
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTAHGSVIPAACALFVEHRRETVYLTAGALPEYRAYQAPALLVHEGMLRLCVNSTQPRRF
HHCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCHHHHHHHHHHHHHCCCCCCEE
NMYGITGVFNDPDDEGRGVLEFKQGFNGHAEELAGAFILPTSTIRYKLSEAAHTIKPLRE
EEEEEEEECCCCCCCCCCEEEHHCCCCCCHHHHCCEEEECCHHHHHHHHHHHHHHHHHHH
AGR
HCC
>Mature Secondary Structure
MIYDVTPITFNQLDLLSAGHPQGGFQQTGHMAHLAATDVAATDLIGVTRNGVLSAGCLIA
CEEECCCCCCCCHHHHCCCCCCCCCHHCCCEEEHHHHHHHHHHHHHCCCCCCEECCEEEE
WTRGRLGLEGSIWLGPLCALDDPKLLEHMTRGIRLAARRRHAVSVTCWPNIEYQRHDAVG
EECCCCCCCCCEEECCEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEECCCCCC
NPIGVPDTTILDAYRSCSWRHQGFDTGYGKVINRWNWIRTFDGIKDERTLLASYKPRTRW
CCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHCCCHHHHHCCCCCCHHHHCCCCCCCCE
SVNRARTSGVRVRELGADELGTFVNIERKTAGRRGFTARDEDYYRRFKETFGSRAHFLLA
EHHHHHCCCCEEEECCHHHHCCEEEEEHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEHHH
EIHADELLTGLTAEHDRLADRLDSLRTKYEAHATNRLKRQIDDTTHNLTALERRLDEARA
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTAHGSVIPAACALFVEHRRETVYLTAGALPEYRAYQAPALLVHEGMLRLCVNSTQPRRF
HHCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCHHHHHHHHHHHHHCCCCCCEE
NMYGITGVFNDPDDEGRGVLEFKQGFNGHAEELAGAFILPTSTIRYKLSEAAHTIKPLRE
EEEEEEEECCCCCCCCCCEEEHHCCCCCCHHHHCCEEEECCHHHHHHHHHHHHHHHHHHH
AGR
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8973364 [H]