| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692180
Identifier: 213692180
GI number: 213692180
Start: 1487491
End: 1488306
Strand: Direct
Name: 213692180
Synonym: Blon_1300
Alternate gene names: NA
Gene position: 1487491-1488306 (Clockwise)
Preceding gene: 213692179
Following gene: 213692181
Centisome position: 52.51
GC content: 58.46
Gene sequence:
>816_bases ATGGCCGAAACTGACCGCATCGCCCGATTGGAGACCGCATTCACCGGACGCAACGCATGGAACACCGGATGGCAATGGGC CGATAGTTATGGTGATCTGATCTACAATCACCCGGACGGTTCCAAACGTGAACTGGGTTCCTGTTATGACCGGGACAAGC TGATCGCGTTCTCGAATACGCTCGACGGCTCACATGGAAACCTGCTGAAGCACATGCGCGACAAGAACCCGCTCAGGTCG AACGACCCGATGGCGGATATCATGATCGGCATCCTGCGCCAGACCAGCCCGGAACTGCTGCGCCGACTGTCCGATGACCC GCAGGGATTCCGAGACCTGTGGTCATTTGTCTGGCAGCGGGCGAAGGAGCCTCCCGAACCGGCATATCTGCTGCTCGACG GGAAAGACGTGAACGAGTGCAGGAAGGCGGCGCTGAAAACCATCAACCGGTACCGTTCGTTCTACCGGAGCCTCGACGCC GAACTGGATAGGCTCACCGATGGCGGATACGGATGCATGATCATGTATGAGACCGCCATCCAGGCCGAAATCAGGTTGAA AAGGTACTCATGGGACGAGCGGGGACGCTGGTGCATGAATCCGATGATGACACTCTCCGGCAATCTGGAGATTCTGCTGG AACCTGATTCGACCGACTGGCGTCACAAGACACCGCACGTGCATGGGACCATCAGCACCGGTTTCGCCTACCGTCCGAAC GACGGCCACCAGTGGGATGAGCCAAAACATCATGCGACGCCTGAACGTCTGGCCGGCGCGATCATCCGACAGTTGAAGGG CAAGGGCTTGCTGTGA
Upstream 100 bases:
>100_bases CCGTGCCGGTCGATCTGGTCAGTCGGCTCGCCGCATTCACTTTGACTCACCCGAACGAGCCGGATGGCATCACGACTCGA AAATCCTGAAAGGAGCGATA
Downstream 100 bases:
>100_bases AAACCGTTTGCATCGATATCGACAACACGATCGCCGACTACACGAACGGTCTGCGCGACTACATCCGCGAATGCGGACAT GGCGAGGACGAATGCCCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 271; Mature: 270
Protein sequence:
>271_residues MAETDRIARLETAFTGRNAWNTGWQWADSYGDLIYNHPDGSKRELGSCYDRDKLIAFSNTLDGSHGNLLKHMRDKNPLRS NDPMADIMIGILRQTSPELLRRLSDDPQGFRDLWSFVWQRAKEPPEPAYLLLDGKDVNECRKAALKTINRYRSFYRSLDA ELDRLTDGGYGCMIMYETAIQAEIRLKRYSWDERGRWCMNPMMTLSGNLEILLEPDSTDWRHKTPHVHGTISTGFAYRPN DGHQWDEPKHHATPERLAGAIIRQLKGKGLL
Sequences:
>Translated_271_residues MAETDRIARLETAFTGRNAWNTGWQWADSYGDLIYNHPDGSKRELGSCYDRDKLIAFSNTLDGSHGNLLKHMRDKNPLRS NDPMADIMIGILRQTSPELLRRLSDDPQGFRDLWSFVWQRAKEPPEPAYLLLDGKDVNECRKAALKTINRYRSFYRSLDA ELDRLTDGGYGCMIMYETAIQAEIRLKRYSWDERGRWCMNPMMTLSGNLEILLEPDSTDWRHKTPHVHGTISTGFAYRPN DGHQWDEPKHHATPERLAGAIIRQLKGKGLL >Mature_270_residues AETDRIARLETAFTGRNAWNTGWQWADSYGDLIYNHPDGSKRELGSCYDRDKLIAFSNTLDGSHGNLLKHMRDKNPLRSN DPMADIMIGILRQTSPELLRRLSDDPQGFRDLWSFVWQRAKEPPEPAYLLLDGKDVNECRKAALKTINRYRSFYRSLDAE LDRLTDGGYGCMIMYETAIQAEIRLKRYSWDERGRWCMNPMMTLSGNLEILLEPDSTDWRHKTPHVHGTISTGFAYRPND GHQWDEPKHHATPERLAGAIIRQLKGKGLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31281; Mature: 31149
Theoretical pI: Translated: 7.63; Mature: 7.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAETDRIARLETAFTGRNAWNTGWQWADSYGDLIYNHPDGSKRELGSCYDRDKLIAFSNT CCCCHHHHHHHHHHCCCCCCCCCCCHHCCCCCEEEECCCCCHHHHHHHCCCCCEEEEECC LDGSHGNLLKHMRDKNPLRSNDPMADIMIGILRQTSPELLRRLSDDPQGFRDLWSFVWQR CCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHH AKEPPEPAYLLLDGKDVNECRKAALKTINRYRSFYRSLDAELDRLTDGGYGCMIMYETAI CCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECHH QAEIRLKRYSWDERGRWCMNPMMTLSGNLEILLEPDSTDWRHKTPHVHGTISTGFAYRPN HHHHHHHHCCCCCCCCCHHCCCEEECCCEEEEECCCCCCCCCCCCCEEEEECCCEEECCC DGHQWDEPKHHATPERLAGAIIRQLKGKGLL CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC >Mature Secondary Structure AETDRIARLETAFTGRNAWNTGWQWADSYGDLIYNHPDGSKRELGSCYDRDKLIAFSNT CCCHHHHHHHHHHCCCCCCCCCCCHHCCCCCEEEECCCCCHHHHHHHCCCCCEEEEECC LDGSHGNLLKHMRDKNPLRSNDPMADIMIGILRQTSPELLRRLSDDPQGFRDLWSFVWQR CCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHH AKEPPEPAYLLLDGKDVNECRKAALKTINRYRSFYRSLDAELDRLTDGGYGCMIMYETAI CCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECHH QAEIRLKRYSWDERGRWCMNPMMTLSGNLEILLEPDSTDWRHKTPHVHGTISTGFAYRPN HHHHHHHHCCCCCCCCCHHCCCEEECCCEEEEECCCCCCCCCCCCCEEEEECCCEEECCC DGHQWDEPKHHATPERLAGAIIRQLKGKGLL CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA