| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
Click here to switch to the map view.
The map label for this gene is 213692163
Identifier: 213692163
GI number: 213692163
Start: 1479029
End: 1479391
Strand: Direct
Name: 213692163
Synonym: Blon_1283
Alternate gene names: NA
Gene position: 1479029-1479391 (Clockwise)
Preceding gene: 213692162
Following gene: 213692164
Centisome position: 52.21
GC content: 58.95
Gene sequence:
>363_bases GTGGGTTTGAGATTCACCGACGACGAGAACCGCATCCTCGAACTGCATGTGACCGACTGGTGCGACGTGGACATCACCGA ACGGGCGCTCGACGACATGGGCGAACCCGGACTGTTCGGCAGGCATGTGGCTGACGTGCGCGAAGTGCTGCGCAGGGCGT TGGACTTCGCGAAATACCCCGACCCGAGCCTAGGCTCGACGATAAGGACATCCTACCGGCTTACCGACAAAGACCACACC AGTTCCGGCTGGTACCAAACCGGCGGCGACATGCTCATGAGCACACCCGAACTGGTCTTGGCCGTCAAGGATGGTGTCGG GTTGGTGAGCAAAGGACAAGGAAAAAACGAATGGAATCTCTAG
Upstream 100 bases:
>100_bases AAATACAAGGAGAAGCATTCAACTAACGCACGGGCGTAACGCCCACGAAGCATCAGAACAACGCCGCGTCGGGCATCCTG ACCGGCTGGCACGAGGGGAT
Downstream 100 bases:
>100_bases GAAAAAACCGACTCATACACAGGAAAATCACATCCATTACGCTCGCGCTCCTACTGGGCGCGGGCGGCATCGCCGCACTC CCCCCGACCGCGTTGGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 120; Mature: 119
Protein sequence:
>120_residues MGLRFTDDENRILELHVTDWCDVDITERALDDMGEPGLFGRHVADVREVLRRALDFAKYPDPSLGSTIRTSYRLTDKDHT SSGWYQTGGDMLMSTPELVLAVKDGVGLVSKGQGKNEWNL
Sequences:
>Translated_120_residues MGLRFTDDENRILELHVTDWCDVDITERALDDMGEPGLFGRHVADVREVLRRALDFAKYPDPSLGSTIRTSYRLTDKDHT SSGWYQTGGDMLMSTPELVLAVKDGVGLVSKGQGKNEWNL >Mature_119_residues GLRFTDDENRILELHVTDWCDVDITERALDDMGEPGLFGRHVADVREVLRRALDFAKYPDPSLGSTIRTSYRLTDKDHTS SGWYQTGGDMLMSTPELVLAVKDGVGLVSKGQGKNEWNL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13471; Mature: 13340
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLRFTDDENRILELHVTDWCDVDITERALDDMGEPGLFGRHVADVREVLRRALDFAKYP CCCCCCCCCCCEEEEEECCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCC DPSLGSTIRTSYRLTDKDHTSSGWYQTGGDMLMSTPELVLAVKDGVGLVSKGQGKNEWNL CCCCCCCEECEEEECCCCCCCCCCEECCCCEEECCCEEEEEECCCCCEEECCCCCCCCCC >Mature Secondary Structure GLRFTDDENRILELHVTDWCDVDITERALDDMGEPGLFGRHVADVREVLRRALDFAKYP CCCCCCCCCCEEEEEECCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCC DPSLGSTIRTSYRLTDKDHTSSGWYQTGGDMLMSTPELVLAVKDGVGLVSKGQGKNEWNL CCCCCCCEECEEEECCCCCCCCCCEECCCCEEECCCEEEEEECCCCCEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA