| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692156
Identifier: 213692156
GI number: 213692156
Start: 1473442
End: 1474452
Strand: Direct
Name: 213692156
Synonym: Blon_1276
Alternate gene names: NA
Gene position: 1473442-1474452 (Clockwise)
Preceding gene: 213692155
Following gene: 213692157
Centisome position: 52.01
GC content: 62.71
Gene sequence:
>1011_bases ATGAAAACTCAAGTGCGCACGTCCGACGCAAATCCGTTCCGTCCAGGGAGCTCTCCACGTTCATCCTGCACCGGGATACG GGCGCCACGGATCCGGATCGGCCGTTCAAACACGAATGCTCGTGCGGCCGCTGGGTCACCGCTTTGGACTGGCATCTGCA CGGGTGCTGGACGGGTTCCGAATGCCAGTACGACGAGCCTCCAAGCGTCCTCCACGAATATGAGAGGTTTCTCGCATACG ACCTGTTGTGCGAGGCATTGGGGCAGGTCGGAGTGCTGGCGCCCATCCGATACGAACACCCATCCCGTATGGGAAGAGGG AGGAGGAACCCATGCGTGGTTTCATGCGATTCATCGGATTGGGCCGTCTGCTGACGGTCGGCGCGATCGCGTTCGCCGTC ACCCTGGCCGCGGCGCTGGCGGCGTTCCTTTGCGACCGGCTGGGCGTCGGTATCCCGTGGCTTCCGTTCGGCCTGCATGC GGTATCCGTGCTGGGCGGACTGACCGCCGCGGTCACGCTGACGGCCGCCGACATCAGGAACGACATACGGCGCATCGGCA GGAACATCGAAGCCTCGGAACGATCGGAACGCAAATGAGCGTATTGGATATGACCGGCATTCCCGACGACGGTTCGCTCG AGGATCAATTGAAGTGGCGCCGGTATGCGAACCGGGTGGACGAACTGTTCAAGCCGGACAAACGCAAGCGCGAGAGGCTG GTGAAGGCGCTGGAAGGATACTCGAGGGCGGCGCGTGAGGCACGCCGGCTCGCCTACGAATTGTGGGCTTCGGAGACGGA ATGGTTCGAAGGATGCAAGAGGCAGGCGGCCGACGAACAGGACATCGATCTCGAATACGATCCGGAACCCGACACGGATC CGGATCTGGCCGCGTTCTGGCAACGGTTGGAGGAGTTCGCGGACTGTGACAGCACTTTGATGGAATCGGCGGAATCGGCC GATGGGCTGATCGGGCTGCTCGCAGGCGGAGAACGCCGGCCCCGCCAATAG
Upstream 100 bases:
>100_bases TCGCGATCTGCTCGTTTATCGGAAGCCAACTGTTCGGCGGCGCGATTCTGGTGATGGAGGAAGACCAACGGAAACGACCA ACACAACGGGACGAACGGTA
Downstream 100 bases:
>100_bases TCGAACAAATGTTCTAACATGTGGGTCGTGGACGACCGGCATCTGACCCCAAGAGACAAAACCGAACTCGGCATCCAGGC CCGGCTCATCGCCCGGGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MKTQVRTSDANPFRPGSSPRSSCTGIRAPRIRIGRSNTNARAAAGSPLWTGICTGAGRVPNASTTSLQASSTNMRGFSHT TCCARHWGRSECWRPSDTNTHPVWEEGGGTHAWFHAIHRIGPSADGRRDRVRRHPGRGAGGVPLRPAGRRYPVASVRPAC GIRAGRTDRRGHADGRRHQERHTAHRQEHRSLGTIGTQMSVLDMTGIPDDGSLEDQLKWRRYANRVDELFKPDKRKRERL VKALEGYSRAAREARRLAYELWASETEWFEGCKRQAADEQDIDLEYDPEPDTDPDLAAFWQRLEEFADCDSTLMESAESA DGLIGLLAGGERRPRQ
Sequences:
>Translated_336_residues MKTQVRTSDANPFRPGSSPRSSCTGIRAPRIRIGRSNTNARAAAGSPLWTGICTGAGRVPNASTTSLQASSTNMRGFSHT TCCARHWGRSECWRPSDTNTHPVWEEGGGTHAWFHAIHRIGPSADGRRDRVRRHPGRGAGGVPLRPAGRRYPVASVRPAC GIRAGRTDRRGHADGRRHQERHTAHRQEHRSLGTIGTQMSVLDMTGIPDDGSLEDQLKWRRYANRVDELFKPDKRKRERL VKALEGYSRAAREARRLAYELWASETEWFEGCKRQAADEQDIDLEYDPEPDTDPDLAAFWQRLEEFADCDSTLMESAESA DGLIGLLAGGERRPRQ >Mature_336_residues MKTQVRTSDANPFRPGSSPRSSCTGIRAPRIRIGRSNTNARAAAGSPLWTGICTGAGRVPNASTTSLQASSTNMRGFSHT TCCARHWGRSECWRPSDTNTHPVWEEGGGTHAWFHAIHRIGPSADGRRDRVRRHPGRGAGGVPLRPAGRRYPVASVRPAC GIRAGRTDRRGHADGRRHQERHTAHRQEHRSLGTIGTQMSVLDMTGIPDDGSLEDQLKWRRYANRVDELFKPDKRKRERL VKALEGYSRAAREARRLAYELWASETEWFEGCKRQAADEQDIDLEYDPEPDTDPDLAAFWQRLEEFADCDSTLMESAESA DGLIGLLAGGERRPRQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37527; Mature: 37527
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTQVRTSDANPFRPGSSPRSSCTGIRAPRIRIGRSNTNARAAAGSPLWTGICTGAGRVP CCCCCCCCCCCCCCCCCCCHHHCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHCCCCCCC NASTTSLQASSTNMRGFSHTTCCARHWGRSECWRPSDTNTHPVWEEGGGTHAWFHAIHRI CCCCCEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH GPSADGRRDRVRRHPGRGAGGVPLRPAGRRYPVASVRPACGIRAGRTDRRGHADGRRHQE CCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH RHTAHRQEHRSLGTIGTQMSVLDMTGIPDDGSLEDQLKWRRYANRVDELFKPDKRKRERL HHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH VKALEGYSRAAREARRLAYELWASETEWFEGCKRQAADEQDIDLEYDPEPDTDPDLAAFW HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCEECCCCCCCHHHHHHH QRLEEFADCDSTLMESAESADGLIGLLAGGERRPRQ HHHHHHHCHHHHHHHHHHHHCCEEEEECCCCCCCCC >Mature Secondary Structure MKTQVRTSDANPFRPGSSPRSSCTGIRAPRIRIGRSNTNARAAAGSPLWTGICTGAGRVP CCCCCCCCCCCCCCCCCCCHHHCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHCCCCCCC NASTTSLQASSTNMRGFSHTTCCARHWGRSECWRPSDTNTHPVWEEGGGTHAWFHAIHRI CCCCCEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH GPSADGRRDRVRRHPGRGAGGVPLRPAGRRYPVASVRPACGIRAGRTDRRGHADGRRHQE CCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH RHTAHRQEHRSLGTIGTQMSVLDMTGIPDDGSLEDQLKWRRYANRVDELFKPDKRKRERL HHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH VKALEGYSRAAREARRLAYELWASETEWFEGCKRQAADEQDIDLEYDPEPDTDPDLAAFW HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCEECCCCCCCHHHHHHH QRLEEFADCDSTLMESAESADGLIGLLAGGERRPRQ HHHHHHHCHHHHHHHHHHHHCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA