Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

Click here to switch to the map view.

The map label for this gene is 213692130

Identifier: 213692130

GI number: 213692130

Start: 1435709

End: 1438078

Strand: Reverse

Name: 213692130

Synonym: Blon_1250

Alternate gene names: NA

Gene position: 1438078-1435709 (Counterclockwise)

Preceding gene: 213692132

Following gene: 213692129

Centisome position: 50.77

GC content: 72.24

Gene sequence:

>2370_bases
ATGTGGTTCGAACTGGTTCCCGCGCCGCGCGCGGATGAGACGGATGATGATGCGGGGTTCCAGCGTGACGCGAAGGCCAT
GGCCGACGCGATCGGCTTGTCGTCGCGTCCCGGATGGCTGGACTGGTGGAGGCATGACGACGGGTGCCGTCTGGTGGCGG
CCGGGGAACGCCGGTGGGTGGAGGTGTCCGACCGGTATGGGCAGAAGGCGGGCGAACTGGTAGCGCGTGCGGCGAACGCG
TCGATCCGCGCGTGCGGGCGGCCGGACGTGCTGGACCGTCCTCGTGTGTGGGCGCACGCGTTCGTGCCGATCAGCGCGTC
CCTGGCGCGTACGGCGCGCGACGGGGAGCCGAGCCTGGAACGTCCCCGCCTGGATGCGGGCGAGGACACGGTGATCGTGG
TGAACGTGCGCCGGCTCGGCTGGGTCGAGTCGGGCCGCCTGTCGGACTGGCTGGGCGACGAGTACAACATGCAGGCGGAC
ACGTCGAAGCTCAGGGGCGAGGGGTTGGGCGCGTGCCGTGTGATGGCGGGCGGCGCGGATCCGCGTACGGCGATGGATCA
GGCGAAGCGGGCGGCGAACGCGTTGAACCTGGGGCTGGTGCCGGGCCTGTCCGCGCATGTGAGCCGTCCCGGCCTGGGGT
TCCTTCTGTGCATGCTCCTCCTGACGGTCGTGTCCGTGCCGGCCGTCATGCTCCCGTCCATGACGGCCGGCTGGCTCATG
GCCGTGCCTCTGCTCATGCTCGCCATGACGGCGGGGGCGACGGTCCGCTGGCGTCTGCGCCGTGATCCCGTGAACGACCT
GTCCCAGAGGCCCCGTCATTACTGGTGGCGTGCGCGCAGACGGTGGGCGCGCGCCGCCGACCTGAAGACCCGGATGGCGG
GCGACGATCAGAACGCGGACGGGCCGGGCCGGAAGCGCCGCGTCCACGCGTACGCGTTCCAACGGTCCACGCTGCCGTTG
CCGTGCGGCGCGCTGGCCGCCCTGGCGGCCCCGTCGGGCCGGCGCAACGCGTCGGTGAGCGCGCTGACGGTCATGCCCGA
CCAGTTGGACGGGTGCGACGGTCCCGTCCTGGGCGTGGATGCGGAACGGCGCACGGTGCGCATGAGCGTGGACGCGTTGT
ACGGCGGCGTGATGCTGATGGGCGAGCCCGGCGGCGGGAAAAGCAACATGATGCATGGGGTGGCCGGGTGGATGGGCGGC
CGGCATCGGACGGGCGACGTGCTCGTCGACTTCGAATCGAAGGGCGTGGACGCGCAGCCCGTGCTGAAGCGTCTCATCCC
GGGCCTGCTCGTCATCGACGTGAACGATCCGGCAACGCCGATGATCGACCTGCTGGGCGCCGGGTCGAACGTGGAGCGTG
CGGGCCGGTTCGCGGATCTCATGCAGGCCGCGTTGGGCGTCCAGCAGATCGGCCCCCAGTCGCGCATCCAGTTGCGTGAC
GCGACGTTCGTCGCCCTGGAGGGTCTGGCGGCGGCGGATCTGGGGGCGCGGTGCAACGCGTGCAACGTTCCCGTCCCGTC
GGGCTGGGTCGAATATGCGGCGCGCCTTTTGGGCCGTAACGGGGTGATGGACGCGCGCATGCTGGGCCGTGCGAGCGTGT
TCGCGTGCGACACGCGTGGGGTTCGGGACGCGGTGGAGCGATTGCATGGCGGCGTGTCGGACAAGGGGACGCCGAAGATC
CGCGACGGGGAGCTCGCCGGCCTGCTGCGCGCGCCCATGAACAAGATGGACGTGCTCGCGTCCGCGGGCCGCGTGTTCGC
GCCGGGACGGCGCGTCCTGTCCTGGGCGTCCGTGATCCGCCGGTCCGCGCATGCGGGCGACGTGCGCATCATGGTCAACC
TGGGCGCCGCGGTCCGGGCCGGCGTGGACGGCCGGCATGCGGATCTGCCGGACGGGGCGCGGCGTCTGATCGGCGCGCTC
CTGTTCCGCGGCCTGAAGGACGAGATCGTCGCCTCCTGCGCGGGCTGGCAGGCGCGTGGGCGCGCGGTGCGCGTCCTGGT
CGACGAGCTGACGGACGTGTTGGGCGCGGACGGCGACACGGGGGGCGGCAACGCGGACATCCTCGCCTGGCTGCGTGAGA
AGGGGCGCGCGTACGGCGTGCAGCTGGTGGCGGGCACGCAGAACGCGGTCCAGTTGGAGGGCGGGCTGCTCGCCTCGGTG
ACCGGCCTGATGACGGTCGGCACGTTCGTGTTGCGCGCGGATCTGACGGCGGGCCCGTCCGCCGTGGCGGTCGGGTCGGA
TCCGGCGACGGTGCGCGGCCTGCCGTTGCACACGGTGCTGGTGCGCACGGTCGGCCCTCCCCCGGACATGGCGGGCCTGC
CTCCCATGATCCTGTCCGTCCCCCATTTCGACGCGGGCGCGCCCGTGTGA

Upstream 100 bases:

>100_bases
CCATCATGCGTCCGGCATGCGCGTCGCGGCCCGGTGCCGCGCATGCGCATGCCGGCCTCCTTTCACGCGCGCGTATGCGT
TCCGGGGCATAGGGCGGGGC

Downstream 100 bases:

>100_bases
CGCATACCCGGGTCGCAAACCGTTGTTTTCGTGTGGAAAGGACATGATGGTGAGGGTATTGGTCGATGCGAGGGAGTTCG
CGAACATGGTCGCGCATGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 789; Mature: 789

Protein sequence:

>789_residues
MWFELVPAPRADETDDDAGFQRDAKAMADAIGLSSRPGWLDWWRHDDGCRLVAAGERRWVEVSDRYGQKAGELVARAANA
SIRACGRPDVLDRPRVWAHAFVPISASLARTARDGEPSLERPRLDAGEDTVIVVNVRRLGWVESGRLSDWLGDEYNMQAD
TSKLRGEGLGACRVMAGGADPRTAMDQAKRAANALNLGLVPGLSAHVSRPGLGFLLCMLLLTVVSVPAVMLPSMTAGWLM
AVPLLMLAMTAGATVRWRLRRDPVNDLSQRPRHYWWRARRRWARAADLKTRMAGDDQNADGPGRKRRVHAYAFQRSTLPL
PCGALAALAAPSGRRNASVSALTVMPDQLDGCDGPVLGVDAERRTVRMSVDALYGGVMLMGEPGGGKSNMMHGVAGWMGG
RHRTGDVLVDFESKGVDAQPVLKRLIPGLLVIDVNDPATPMIDLLGAGSNVERAGRFADLMQAALGVQQIGPQSRIQLRD
ATFVALEGLAAADLGARCNACNVPVPSGWVEYAARLLGRNGVMDARMLGRASVFACDTRGVRDAVERLHGGVSDKGTPKI
RDGELAGLLRAPMNKMDVLASAGRVFAPGRRVLSWASVIRRSAHAGDVRIMVNLGAAVRAGVDGRHADLPDGARRLIGAL
LFRGLKDEIVASCAGWQARGRAVRVLVDELTDVLGADGDTGGGNADILAWLREKGRAYGVQLVAGTQNAVQLEGGLLASV
TGLMTVGTFVLRADLTAGPSAVAVGSDPATVRGLPLHTVLVRTVGPPPDMAGLPPMILSVPHFDAGAPV

Sequences:

>Translated_789_residues
MWFELVPAPRADETDDDAGFQRDAKAMADAIGLSSRPGWLDWWRHDDGCRLVAAGERRWVEVSDRYGQKAGELVARAANA
SIRACGRPDVLDRPRVWAHAFVPISASLARTARDGEPSLERPRLDAGEDTVIVVNVRRLGWVESGRLSDWLGDEYNMQAD
TSKLRGEGLGACRVMAGGADPRTAMDQAKRAANALNLGLVPGLSAHVSRPGLGFLLCMLLLTVVSVPAVMLPSMTAGWLM
AVPLLMLAMTAGATVRWRLRRDPVNDLSQRPRHYWWRARRRWARAADLKTRMAGDDQNADGPGRKRRVHAYAFQRSTLPL
PCGALAALAAPSGRRNASVSALTVMPDQLDGCDGPVLGVDAERRTVRMSVDALYGGVMLMGEPGGGKSNMMHGVAGWMGG
RHRTGDVLVDFESKGVDAQPVLKRLIPGLLVIDVNDPATPMIDLLGAGSNVERAGRFADLMQAALGVQQIGPQSRIQLRD
ATFVALEGLAAADLGARCNACNVPVPSGWVEYAARLLGRNGVMDARMLGRASVFACDTRGVRDAVERLHGGVSDKGTPKI
RDGELAGLLRAPMNKMDVLASAGRVFAPGRRVLSWASVIRRSAHAGDVRIMVNLGAAVRAGVDGRHADLPDGARRLIGAL
LFRGLKDEIVASCAGWQARGRAVRVLVDELTDVLGADGDTGGGNADILAWLREKGRAYGVQLVAGTQNAVQLEGGLLASV
TGLMTVGTFVLRADLTAGPSAVAVGSDPATVRGLPLHTVLVRTVGPPPDMAGLPPMILSVPHFDAGAPV
>Mature_789_residues
MWFELVPAPRADETDDDAGFQRDAKAMADAIGLSSRPGWLDWWRHDDGCRLVAAGERRWVEVSDRYGQKAGELVARAANA
SIRACGRPDVLDRPRVWAHAFVPISASLARTARDGEPSLERPRLDAGEDTVIVVNVRRLGWVESGRLSDWLGDEYNMQAD
TSKLRGEGLGACRVMAGGADPRTAMDQAKRAANALNLGLVPGLSAHVSRPGLGFLLCMLLLTVVSVPAVMLPSMTAGWLM
AVPLLMLAMTAGATVRWRLRRDPVNDLSQRPRHYWWRARRRWARAADLKTRMAGDDQNADGPGRKRRVHAYAFQRSTLPL
PCGALAALAAPSGRRNASVSALTVMPDQLDGCDGPVLGVDAERRTVRMSVDALYGGVMLMGEPGGGKSNMMHGVAGWMGG
RHRTGDVLVDFESKGVDAQPVLKRLIPGLLVIDVNDPATPMIDLLGAGSNVERAGRFADLMQAALGVQQIGPQSRIQLRD
ATFVALEGLAAADLGARCNACNVPVPSGWVEYAARLLGRNGVMDARMLGRASVFACDTRGVRDAVERLHGGVSDKGTPKI
RDGELAGLLRAPMNKMDVLASAGRVFAPGRRVLSWASVIRRSAHAGDVRIMVNLGAAVRAGVDGRHADLPDGARRLIGAL
LFRGLKDEIVASCAGWQARGRAVRVLVDELTDVLGADGDTGGGNADILAWLREKGRAYGVQLVAGTQNAVQLEGGLLASV
TGLMTVGTFVLRADLTAGPSAVAVGSDPATVRGLPLHTVLVRTVGPPPDMAGLPPMILSVPHFDAGAPV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 83929; Mature: 83929

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWFELVPAPRADETDDDAGFQRDAKAMADAIGLSSRPGWLDWWRHDDGCRLVAAGERRWV
CCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHEECCCCCEEEEECCCEEE
EVSDRYGQKAGELVARAANASIRACGRPDVLDRPRVWAHAFVPISASLARTARDGEPSLE
EEHHHHCHHHHHHHHHHHCCCEEECCCCCCCCCCCEEEEEEECCHHHHHHHCCCCCCCCC
RPRLDAGEDTVIVVNVRRLGWVESGRLSDWLGDEYNMQADTSKLRGEGLGACRVMAGGAD
CCCCCCCCCEEEEEEEHHHCCCCCCCCHHHCCCCCCCCCCHHHHCCCCCCEEEEEECCCC
PRTAMDQAKRAANALNLGLVPGLSAHVSRPGLGFLLCMLLLTVVSVPAVMLPSMTAGWLM
CHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
AVPLLMLAMTAGATVRWRLRRDPVNDLSQRPRHYWWRARRRWARAADLKTRMAGDDQNAD
HHHHHHHHHHCCCEEEEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GPGRKRRVHAYAFQRSTLPLPCGALAALAAPSGRRNASVSALTVMPDQLDGCDGPVLGVD
CCCCCCEEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCHHCCCCCCCEEECC
AERRTVRMSVDALYGGVMLMGEPGGGKSNMMHGVAGWMGGRHRTGDVLVDFESKGVDAQP
CCCCEEEEEHHHHHCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHH
VLKRLIPGLLVIDVNDPATPMIDLLGAGSNVERAGRFADLMQAALGVQQIGPQSRIQLRD
HHHHHCCCEEEEECCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHEEECC
ATFVALEGLAAADLGARCNACNVPVPSGWVEYAARLLGRNGVMDARMLGRASVFACDTRG
CEEEHHCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHCCCEEEEECCCC
VRDAVERLHGGVSDKGTPKIRDGELAGLLRAPMNKMDVLASAGRVFAPGRRVLSWASVIR
HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHCCCEECCHHHHHHHHHHHH
RSAHAGDVRIMVNLGAAVRAGVDGRHADLPDGARRLIGALLFRGLKDEIVASCAGWQARG
HCCCCCCEEEEEECCHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCHHCC
RAVRVLVDELTDVLGADGDTGGGNADILAWLREKGRAYGVQLVAGTQNAVQLEGGLLASV
CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEEEEEECCCCEEEECCCHHHHH
TGLMTVGTFVLRADLTAGPSAVAVGSDPATVRGLPLHTVLVRTVGPPPDMAGLPPMILSV
HHHHHHHHHHHEECCCCCCCEEEECCCCCEEECCCHHEEEEEECCCCCCCCCCCHHHEEC
PHFDAGAPV
CCCCCCCCC
>Mature Secondary Structure
MWFELVPAPRADETDDDAGFQRDAKAMADAIGLSSRPGWLDWWRHDDGCRLVAAGERRWV
CCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHEECCCCCEEEEECCCEEE
EVSDRYGQKAGELVARAANASIRACGRPDVLDRPRVWAHAFVPISASLARTARDGEPSLE
EEHHHHCHHHHHHHHHHHCCCEEECCCCCCCCCCCEEEEEEECCHHHHHHHCCCCCCCCC
RPRLDAGEDTVIVVNVRRLGWVESGRLSDWLGDEYNMQADTSKLRGEGLGACRVMAGGAD
CCCCCCCCCEEEEEEEHHHCCCCCCCCHHHCCCCCCCCCCHHHHCCCCCCEEEEEECCCC
PRTAMDQAKRAANALNLGLVPGLSAHVSRPGLGFLLCMLLLTVVSVPAVMLPSMTAGWLM
CHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
AVPLLMLAMTAGATVRWRLRRDPVNDLSQRPRHYWWRARRRWARAADLKTRMAGDDQNAD
HHHHHHHHHHCCCEEEEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GPGRKRRVHAYAFQRSTLPLPCGALAALAAPSGRRNASVSALTVMPDQLDGCDGPVLGVD
CCCCCCEEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCHHCCCCCCCEEECC
AERRTVRMSVDALYGGVMLMGEPGGGKSNMMHGVAGWMGGRHRTGDVLVDFESKGVDAQP
CCCCEEEEEHHHHHCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHH
VLKRLIPGLLVIDVNDPATPMIDLLGAGSNVERAGRFADLMQAALGVQQIGPQSRIQLRD
HHHHHCCCEEEEECCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHEEECC
ATFVALEGLAAADLGARCNACNVPVPSGWVEYAARLLGRNGVMDARMLGRASVFACDTRG
CEEEHHCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHCCCEEEEECCCC
VRDAVERLHGGVSDKGTPKIRDGELAGLLRAPMNKMDVLASAGRVFAPGRRVLSWASVIR
HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHCCCEECCHHHHHHHHHHHH
RSAHAGDVRIMVNLGAAVRAGVDGRHADLPDGARRLIGALLFRGLKDEIVASCAGWQARG
HCCCCCCEEEEEECCHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCHHCC
RAVRVLVDELTDVLGADGDTGGGNADILAWLREKGRAYGVQLVAGTQNAVQLEGGLLASV
CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEEEEEECCCCEEEECCCHHHHH
TGLMTVGTFVLRADLTAGPSAVAVGSDPATVRGLPLHTVLVRTVGPPPDMAGLPPMILSV
HHHHHHHHHHHEECCCCCCCEEEECCCCCEEECCCHHEEEEEECCCCCCCCCCCHHHEEC
PHFDAGAPV
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA