| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692126
Identifier: 213692126
GI number: 213692126
Start: 1432209
End: 1433480
Strand: Reverse
Name: 213692126
Synonym: Blon_1246
Alternate gene names: NA
Gene position: 1433480-1432209 (Counterclockwise)
Preceding gene: 213692129
Following gene: 213692124
Centisome position: 50.6
GC content: 67.37
Gene sequence:
>1272_bases ATGAAACGTCTCCTGCCCCTCCTGCTCGCCGCCAGCCCGCCGGTGCTCGTCCTGCTGCTCGCGTTCGCCATGGTGGTCGT GGCCGCGCCCGCGGGCATGACCACCATGGCCGCGGCCACCATGGCGGACACGGCCGACTGTACGGACGACACGGACACGA CGGTCACGCCCAACGACGTGGCCGCGTCCCTCGCCAGGGCGTTCGCCAAGGCCGGGTATTCGAAGGCGAGCACGGCGGGC GTGCTCGGCGTCATCCAGTTCGAATCGGGCATGAACCCCGCGCAGGAGCAGATCGGCGAACCCGATCCCATGCTGCGCGG CTATGGGCTGAACCAGTGGACGCCGCGAAGCAAGATCCGCAACTGGATGGACGCGAACCACGTGTCGGGCGAGGATTCCG ACGCGGACGTGCAGATCCGCATGCTCGTCGCCACCGCGCAGACCGATTTCAACAACCATTTCCTCGACGCGGTCAAGGCC GAGGGGCACGAGCCCATCGACGACGACCTGCGCACGTGGTGGCTGCAGGCCGACAATCCCGAGGACGCGGCCGTCGCCTG GATGGCCGGCTACGGGCGCCCCTACTGGGCGGACCGGCATGAGAAGGAACGCGAGCAGTACGCGCGCGCCTACTACGATT CGAAGGAGCTCGCCGACATCGACTTCCCGGCCGAATCGAAGCCGGACGGGAAGAAGGACGCCGCGTCCCCGTCGGACACG GCGGACACGGACGCGTCATGCGACGCGGATGCGGATGATTCGTCCGACGGGAACGCGAAATACGGGGACGTGGGCGGCGC GCCCACGAACACGCATGACTTCGGGTGGATGTGCGCCACGAAGCTGAAGATCTGCCAGGCCGGGGACATGGGTGCCCCTC CCCTCGACTGGCAGGCCGCGGGCAACTACCAGTGCTACTGGTATTGGCTGGCCCGCTCATGGCTGGTGCACGACGGGGAC GTCATCAACCCGCACACGATGAACGGCGGACAACTGTCCGACTGGGCGGCGGGCACGAAGGGGTGGACGCGTTCCGACGA GCCCAGACCGGGCGCGGGCGTCTGCTTCTGGGGCGGCGGCAACAACCACGTCGCGTTCGTGGAGAAGGTGGACAAGGATC CGTCCGGCTGGAAGATCATGATCAGCGAAGGCAACTTCAACGACGGGGGCGCGGGCCTGTGGACCAGCTACAACGCGCGT TGGCTGACGAAAGGCGAATACGCGGCGGCCTCCGGCAACGGGTTCTTCTGGAAGGACAGCTGGAAGCTCTAG
Upstream 100 bases:
>100_bases CGGCGCATGTCCTCGATCGTCTCGTCCATGGGTGTGGTCCCCTTTCTCGATGGTCAACCGTCCGGCCTTGTATGCGTCCC GGCCGCATAGCCGGGCATGT
Downstream 100 bases:
>100_bases CAGTAGCCCGGGTTCTGGCAGGACTGGCCGTCGCCGACCCGCACGGGGATGCTCCCCCACAGGCTCATGTCCACGTTTTC GTCGGCCATGAACCGGGTTT
Product: CHAP domain containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 423; Mature: 423
Protein sequence:
>423_residues MKRLLPLLLAASPPVLVLLLAFAMVVVAAPAGMTTMAAATMADTADCTDDTDTTVTPNDVAASLARAFAKAGYSKASTAG VLGVIQFESGMNPAQEQIGEPDPMLRGYGLNQWTPRSKIRNWMDANHVSGEDSDADVQIRMLVATAQTDFNNHFLDAVKA EGHEPIDDDLRTWWLQADNPEDAAVAWMAGYGRPYWADRHEKEREQYARAYYDSKELADIDFPAESKPDGKKDAASPSDT ADTDASCDADADDSSDGNAKYGDVGGAPTNTHDFGWMCATKLKICQAGDMGAPPLDWQAAGNYQCYWYWLARSWLVHDGD VINPHTMNGGQLSDWAAGTKGWTRSDEPRPGAGVCFWGGGNNHVAFVEKVDKDPSGWKIMISEGNFNDGGAGLWTSYNAR WLTKGEYAAASGNGFFWKDSWKL
Sequences:
>Translated_423_residues MKRLLPLLLAASPPVLVLLLAFAMVVVAAPAGMTTMAAATMADTADCTDDTDTTVTPNDVAASLARAFAKAGYSKASTAG VLGVIQFESGMNPAQEQIGEPDPMLRGYGLNQWTPRSKIRNWMDANHVSGEDSDADVQIRMLVATAQTDFNNHFLDAVKA EGHEPIDDDLRTWWLQADNPEDAAVAWMAGYGRPYWADRHEKEREQYARAYYDSKELADIDFPAESKPDGKKDAASPSDT ADTDASCDADADDSSDGNAKYGDVGGAPTNTHDFGWMCATKLKICQAGDMGAPPLDWQAAGNYQCYWYWLARSWLVHDGD VINPHTMNGGQLSDWAAGTKGWTRSDEPRPGAGVCFWGGGNNHVAFVEKVDKDPSGWKIMISEGNFNDGGAGLWTSYNAR WLTKGEYAAASGNGFFWKDSWKL >Mature_423_residues MKRLLPLLLAASPPVLVLLLAFAMVVVAAPAGMTTMAAATMADTADCTDDTDTTVTPNDVAASLARAFAKAGYSKASTAG VLGVIQFESGMNPAQEQIGEPDPMLRGYGLNQWTPRSKIRNWMDANHVSGEDSDADVQIRMLVATAQTDFNNHFLDAVKA EGHEPIDDDLRTWWLQADNPEDAAVAWMAGYGRPYWADRHEKEREQYARAYYDSKELADIDFPAESKPDGKKDAASPSDT ADTDASCDADADDSSDGNAKYGDVGGAPTNTHDFGWMCATKLKICQAGDMGAPPLDWQAAGNYQCYWYWLARSWLVHDGD VINPHTMNGGQLSDWAAGTKGWTRSDEPRPGAGVCFWGGGNNHVAFVEKVDKDPSGWKIMISEGNFNDGGAGLWTSYNAR WLTKGEYAAASGNGFFWKDSWKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45949; Mature: 45949
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: PS50911 CHAP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLLPLLLAASPPVLVLLLAFAMVVVAAPAGMTTMAAATMADTADCTDDTDTTVTPNDV CCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCEECCHHH AASLARAFAKAGYSKASTAGVLGVIQFESGMNPAQEQIGEPDPMLRGYGLNQWTPRSKIR HHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHHHCCCCCCHHCCCCCCCCCCHHHHH NWMDANHVSGEDSDADVQIRMLVATAQTDFNNHFLDAVKAEGHEPIDDDLRTWWLQADNP HHHCCCCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHCCCCCCCCCCHHEEEEECCCC EDAAVAWMAGYGRPYWADRHEKEREQYARAYYDSKELADIDFPAESKPDGKKDAASPSDT CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ADTDASCDADADDSSDGNAKYGDVGGAPTNTHDFGWMCATKLKICQAGDMGAPPLDWQAA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHEEEECCCCCCCCCCCCCC GNYQCYWYWLARSWLVHDGDVINPHTMNGGQLSDWAAGTKGWTRSDEPRPGAGVCFWGGG CCCEEEEEEEECHHEECCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCEEEECCC NNHVAFVEKVDKDPSGWKIMISEGNFNDGGAGLWTSYNARWLTKGEYAAASGNGFFWKDS CCCEEEEEECCCCCCCCEEEEECCCCCCCCCCEEECCCCEEEECCCEEEECCCCCEECCC WKL CCC >Mature Secondary Structure MKRLLPLLLAASPPVLVLLLAFAMVVVAAPAGMTTMAAATMADTADCTDDTDTTVTPNDV CCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCEECCHHH AASLARAFAKAGYSKASTAGVLGVIQFESGMNPAQEQIGEPDPMLRGYGLNQWTPRSKIR HHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHHHCCCCCCHHCCCCCCCCCCHHHHH NWMDANHVSGEDSDADVQIRMLVATAQTDFNNHFLDAVKAEGHEPIDDDLRTWWLQADNP HHHCCCCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHCCCCCCCCCCHHEEEEECCCC EDAAVAWMAGYGRPYWADRHEKEREQYARAYYDSKELADIDFPAESKPDGKKDAASPSDT CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ADTDASCDADADDSSDGNAKYGDVGGAPTNTHDFGWMCATKLKICQAGDMGAPPLDWQAA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHEEEECCCCCCCCCCCCCC GNYQCYWYWLARSWLVHDGDVINPHTMNGGQLSDWAAGTKGWTRSDEPRPGAGVCFWGGG CCCEEEEEEEECHHEECCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCEEEECCC NNHVAFVEKVDKDPSGWKIMISEGNFNDGGAGLWTSYNARWLTKGEYAAASGNGFFWKDS CCCEEEEEECCCCCCCCEEEEECCCCCCCCCCEEECCCCEEEECCCEEEECCCCCEECCC WKL CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA