| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692125
Identifier: 213692125
GI number: 213692125
Start: 1431406
End: 1432212
Strand: Direct
Name: 213692125
Synonym: Blon_1245
Alternate gene names: NA
Gene position: 1431406-1432212 (Clockwise)
Preceding gene: 213692122
Following gene: 213692127
Centisome position: 50.53
GC content: 72.12
Gene sequence:
>807_bases ATGACGGCCACGCCCGACGCGAAGACCGTCGAACACGCCGCGGCGTTCGAGAGACGCCTGCGCGAATGGGGCGCCGACAG CACCATCCGCGCCGACACGCTCGCGCGAAAGGACGCGGGAAGCGTGCTCGCCTCACTGCACGGCACGCCGCCCGCGGACG ATCCGACCACGGGCGAAAACCTGCCCGCCCGCCAGGCGGACGCGGGCCCGCACGCCGCCAACCCCGCATGCCGCGCCTAC CGGCGGCTCGACCAGGTCGGCGACACGGGCGAACGCGCCTGGTGCGCGGACGGGCTCGACGCGGCCGCATGGCTCGCCCG CATCGCCTGGGGGTACGGGAGCCGGTGGACGGACGGGCCGCACTCGGCCGCGGACGGGACGGGCGTACGCGTGACCGGCA CCGTCCGATTCATGTACCTGGCCGGCAACCAGAACCCGAACACGTTGCACGTGGACGACTGGTGGGGGATCACACCCACC TGGATCGACTATCCGGTGGACGACAGGCTCACGGTCCGGGACGGGCGGATCACGGGGATCCGCCACCGGCAGGCCGACCC CTGGTGGATCGACCCGTGGCTCGGCGTATGGGACACGGACATCGGCGACCGGATGAACGGCCGGGGAAGGGTCGGCATCC CCGTGAAGGGCGAACCCGACTGGGGGACGCTGACCGGCGACGGGCTGACCGTCATCCCGCCCGAAACCCGGTTCATGGCC GACGAAAACGTGGACATGAGCCTGTGGGGGAGCATCCCCGTGCGGGTCGGCGACGGCCAGTCCTGCCAGAACCCGGGCTA CTGCTAG
Upstream 100 bases:
>100_bases CACCCTCATAGCCGTCGCCACGCTCGCCGGCATCATCCTGACCGCCGGATGCGCGCGGCAGAAGACCGACACGGGGAAGA CCGGGACGAAACCACAGGCC
Downstream 100 bases:
>100_bases AGCTTCCAGCTGTCCTTCCAGAAGAACCCGTTGCCGGAGGCCGCCGCGTATTCGCCTTTCGTCAGCCAACGCGCGTTGTA GCTGGTCCACAGGCCCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MTATPDAKTVEHAAAFERRLREWGADSTIRADTLARKDAGSVLASLHGTPPADDPTTGENLPARQADAGPHAANPACRAY RRLDQVGDTGERAWCADGLDAAAWLARIAWGYGSRWTDGPHSAADGTGVRVTGTVRFMYLAGNQNPNTLHVDDWWGITPT WIDYPVDDRLTVRDGRITGIRHRQADPWWIDPWLGVWDTDIGDRMNGRGRVGIPVKGEPDWGTLTGDGLTVIPPETRFMA DENVDMSLWGSIPVRVGDGQSCQNPGYC
Sequences:
>Translated_268_residues MTATPDAKTVEHAAAFERRLREWGADSTIRADTLARKDAGSVLASLHGTPPADDPTTGENLPARQADAGPHAANPACRAY RRLDQVGDTGERAWCADGLDAAAWLARIAWGYGSRWTDGPHSAADGTGVRVTGTVRFMYLAGNQNPNTLHVDDWWGITPT WIDYPVDDRLTVRDGRITGIRHRQADPWWIDPWLGVWDTDIGDRMNGRGRVGIPVKGEPDWGTLTGDGLTVIPPETRFMA DENVDMSLWGSIPVRVGDGQSCQNPGYC >Mature_267_residues TATPDAKTVEHAAAFERRLREWGADSTIRADTLARKDAGSVLASLHGTPPADDPTTGENLPARQADAGPHAANPACRAYR RLDQVGDTGERAWCADGLDAAAWLARIAWGYGSRWTDGPHSAADGTGVRVTGTVRFMYLAGNQNPNTLHVDDWWGITPTW IDYPVDDRLTVRDGRITGIRHRQADPWWIDPWLGVWDTDIGDRMNGRGRVGIPVKGEPDWGTLTGDGLTVIPPETRFMAD ENVDMSLWGSIPVRVGDGQSCQNPGYC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29256; Mature: 29124
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATPDAKTVEHAAAFERRLREWGADSTIRADTLARKDAGSVLASLHGTPPADDPTTGEN CCCCCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC LPARQADAGPHAANPACRAYRRLDQVGDTGERAWCADGLDAAAWLARIAWGYGSRWTDGP CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHCCCCCCCCCC HSAADGTGVRVTGTVRFMYLAGNQNPNTLHVDDWWGITPTWIDYPVDDRLTVRDGRITGI CCCCCCCCEEEEEEEEEEEEECCCCCCEEEECCCCCCCCCEECCCCCCEEEEECCCEEEE RHRQADPWWIDPWLGVWDTDIGDRMNGRGRVGIPVKGEPDWGTLTGDGLTVIPPETRFMA ECCCCCCCEECCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCEECCCCEEEECCCCEEEC DENVDMSLWGSIPVRVGDGQSCQNPGYC CCCCCEEEECCEEEEECCCCCCCCCCCC >Mature Secondary Structure TATPDAKTVEHAAAFERRLREWGADSTIRADTLARKDAGSVLASLHGTPPADDPTTGEN CCCCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC LPARQADAGPHAANPACRAYRRLDQVGDTGERAWCADGLDAAAWLARIAWGYGSRWTDGP CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHCCCCCCCCCC HSAADGTGVRVTGTVRFMYLAGNQNPNTLHVDDWWGITPTWIDYPVDDRLTVRDGRITGI CCCCCCCCEEEEEEEEEEEEECCCCCCEEEECCCCCCCCCEECCCCCCEEEEECCCEEEE RHRQADPWWIDPWLGVWDTDIGDRMNGRGRVGIPVKGEPDWGTLTGDGLTVIPPETRFMA ECCCCCCCEECCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCEECCCCEEEECCCCEEEC DENVDMSLWGSIPVRVGDGQSCQNPGYC CCCCCEEEECCEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA