| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692124
Identifier: 213692124
GI number: 213692124
Start: 1429940
End: 1431256
Strand: Reverse
Name: 213692124
Synonym: Blon_1244
Alternate gene names: NA
Gene position: 1431256-1429940 (Counterclockwise)
Preceding gene: 213692126
Following gene: 213692123
Centisome position: 50.53
GC content: 74.64
Gene sequence:
>1317_bases ATGCCGTTCAATCCTTTCGCCGCCGATCCCGGGGCCGGTCTCGCCGAACCCGTCGCGAAGCCGGCCGACGGGGACGCGAC GCGGAAACCCGACGCCGACGACGGCTGGTGGGATTCCGGGAGCGGATCGGATGCGGCGGACGCGACACCGGACCCCGATC CGGCGGACGCGACCACGGTCGGCGTGGACGACGGCCGACGGGATATGGACGGGAGGGACGGGCGATCCGAAGACGCGCCC GATCCCATGCCGGACGACGGGGCGGACGACGACTGGTGGGGCATGGACGCCGAGGAGACCATGCCGGGCCCGCCGGCCGG GATCCCGGCGCGCACGGGGACGGGTGAGACCCCCGACATGGACGCGGACGACGACTGGTGGGGCATGGCCGGCGGGGACG GGCCGCGATCCGAAGACGCCGATCCGACGACGGCTGGACCAGACGCCGTCGACCCCGTGCCGCGGCTCGTCAGCGTGCCC GGCACCAGCGTGCGCATCCCCGCGGATTTCGACTGGGGCACCGACACTCTCGCGGCCGGGCCGGACGACGGCATGCGGGA GCCCGTCCCGGCCTCCGCACGCCGGCCCATCCCGTCGCGCCGCATCCTCATCGCCGGCACGGCCGCCATCCTCGCCCTCG CCCTCCTGGCGGGCGGCGTCGTCGCGACGCGCACGCTCATCGCCTCCGACCGGCAGCGGAAGGCCCACGACGAGGCGTGC GCGACGCTCACCGCGCAGGCCGGAACATGGGACGGGCTCGCCCGGCAGGCGAAGACGCTCGGCGTGAAACCCGGCGACGG GCCCGACACGTCCTGCAAGGCGGACACGGACACGCTCAAGGCCCGGGCCCGCACGCTCAAGACCCGCGCCCGCACGCTCG CCGAGGCGAACCGGAACGCGCTGGACGCCGCATGGAGGGACCTGACCGGCCGGATCGCGGCAAGCAGGAAAAACCATCCG AAGGCCGGAGGGCAGACGCTCGCCGCGCTCGAAACGCTCGCCGAGACCGCGCCCGGGGACGCGGACGGCCTGGCCGCGAA GGAACGGGAATTCGGACGGCTCGACAAGCAGGCCGGACAGGAGCAGCAGAAGACCGAACAGGAGGAGAAGGCGGAGGCGG AGGCGAAACGGAAGGCCGAACAGGAGGCGGAGGCGCGACGGGAGGCCGAACAGGAGCGATCCCAGGCGCAGGACACGCCC CAGGCCGTCACGCCCACGCCGGCCCCGCAGCCGACGCCGACGCCCACGCCCACGCCGGCCCCGCAGCCGACACCCACGCC CATGCCGGCGCCCGGCAACGCGGACGCCAGCATGTGA
Upstream 100 bases:
>100_bases CATCCGGCGGTCAGGATGATGCCGGCGAGCGTGGCGACGGCTATGAGGGTGCGCGATCGTGGTCTCATGCGCGCAGGCTA TGCGCGCATAGGCGTCGCGC
Downstream 100 bases:
>100_bases CGCATACCCGACCCCATGAACGACGCATACGAACGACTCACCATCGGCCAGGCGCAGACCCTGGCCCGCATCATCGACGG CCTGCGCGACCACGGGTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 438; Mature: 437
Protein sequence:
>438_residues MPFNPFAADPGAGLAEPVAKPADGDATRKPDADDGWWDSGSGSDAADATPDPDPADATTVGVDDGRRDMDGRDGRSEDAP DPMPDDGADDDWWGMDAEETMPGPPAGIPARTGTGETPDMDADDDWWGMAGGDGPRSEDADPTTAGPDAVDPVPRLVSVP GTSVRIPADFDWGTDTLAAGPDDGMREPVPASARRPIPSRRILIAGTAAILALALLAGGVVATRTLIASDRQRKAHDEAC ATLTAQAGTWDGLARQAKTLGVKPGDGPDTSCKADTDTLKARARTLKTRARTLAEANRNALDAAWRDLTGRIAASRKNHP KAGGQTLAALETLAETAPGDADGLAAKEREFGRLDKQAGQEQQKTEQEEKAEAEAKRKAEQEAEARREAEQERSQAQDTP QAVTPTPAPQPTPTPTPTPAPQPTPTPMPAPGNADASM
Sequences:
>Translated_438_residues MPFNPFAADPGAGLAEPVAKPADGDATRKPDADDGWWDSGSGSDAADATPDPDPADATTVGVDDGRRDMDGRDGRSEDAP DPMPDDGADDDWWGMDAEETMPGPPAGIPARTGTGETPDMDADDDWWGMAGGDGPRSEDADPTTAGPDAVDPVPRLVSVP GTSVRIPADFDWGTDTLAAGPDDGMREPVPASARRPIPSRRILIAGTAAILALALLAGGVVATRTLIASDRQRKAHDEAC ATLTAQAGTWDGLARQAKTLGVKPGDGPDTSCKADTDTLKARARTLKTRARTLAEANRNALDAAWRDLTGRIAASRKNHP KAGGQTLAALETLAETAPGDADGLAAKEREFGRLDKQAGQEQQKTEQEEKAEAEAKRKAEQEAEARREAEQERSQAQDTP QAVTPTPAPQPTPTPTPTPAPQPTPTPMPAPGNADASM >Mature_437_residues PFNPFAADPGAGLAEPVAKPADGDATRKPDADDGWWDSGSGSDAADATPDPDPADATTVGVDDGRRDMDGRDGRSEDAPD PMPDDGADDDWWGMDAEETMPGPPAGIPARTGTGETPDMDADDDWWGMAGGDGPRSEDADPTTAGPDAVDPVPRLVSVPG TSVRIPADFDWGTDTLAAGPDDGMREPVPASARRPIPSRRILIAGTAAILALALLAGGVVATRTLIASDRQRKAHDEACA TLTAQAGTWDGLARQAKTLGVKPGDGPDTSCKADTDTLKARARTLKTRARTLAEANRNALDAAWRDLTGRIAASRKNHPK AGGQTLAALETLAETAPGDADGLAAKEREFGRLDKQAGQEQQKTEQEEKAEAEAKRKAEQEAEARREAEQERSQAQDTPQ AVTPTPAPQPTPTPTPTPAPQPTPTPMPAPGNADASM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45608; Mature: 45477
Theoretical pI: Translated: 4.21; Mature: 4.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFNPFAADPGAGLAEPVAKPADGDATRKPDADDGWWDSGSGSDAADATPDPDPADATTV CCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE GVDDGRRDMDGRDGRSEDAPDPMPDDGADDDWWGMDAEETMPGPPAGIPARTGTGETPDM CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCC DADDDWWGMAGGDGPRSEDADPTTAGPDAVDPVPRLVSVPGTSVRIPADFDWGTDTLAAG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCEEEECCCCCCCCCCCCCC PDDGMREPVPASARRPIPSRRILIAGTAAILALALLAGGVVATRTLIASDRQRKAHDEAC CCCCCCCCCCCHHCCCCCCCEEEEECHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH ATLTAQAGTWDGLARQAKTLGVKPGDGPDTSCKADTDTLKARARTLKTRARTLAEANRNA HHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHH LDAAWRDLTGRIAASRKNHPKAGGQTLAALETLAETAPGDADGLAAKEREFGRLDKQAGQ HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCH EQQKTEQEEKAEAEAKRKAEQEAEARREAEQERSQAQDTPQAVTPTPAPQPTPTPTPTPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC PQPTPTPMPAPGNADASM CCCCCCCCCCCCCCCCCC >Mature Secondary Structure PFNPFAADPGAGLAEPVAKPADGDATRKPDADDGWWDSGSGSDAADATPDPDPADATTV CCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE GVDDGRRDMDGRDGRSEDAPDPMPDDGADDDWWGMDAEETMPGPPAGIPARTGTGETPDM CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCC DADDDWWGMAGGDGPRSEDADPTTAGPDAVDPVPRLVSVPGTSVRIPADFDWGTDTLAAG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCEEEECCCCCCCCCCCCCC PDDGMREPVPASARRPIPSRRILIAGTAAILALALLAGGVVATRTLIASDRQRKAHDEAC CCCCCCCCCCCHHCCCCCCCEEEEECHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH ATLTAQAGTWDGLARQAKTLGVKPGDGPDTSCKADTDTLKARARTLKTRARTLAEANRNA HHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHH LDAAWRDLTGRIAASRKNHPKAGGQTLAALETLAETAPGDADGLAAKEREFGRLDKQAGQ HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCH EQQKTEQEEKAEAEAKRKAEQEAEARREAEQERSQAQDTPQAVTPTPAPQPTPTPTPTPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC PQPTPTPMPAPGNADASM CCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA