| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692099
Identifier: 213692099
GI number: 213692099
Start: 1400734
End: 1401297
Strand: Reverse
Name: 213692099
Synonym: Blon_1218
Alternate gene names: NA
Gene position: 1401297-1400734 (Counterclockwise)
Preceding gene: 213692104
Following gene: 213692098
Centisome position: 49.47
GC content: 69.86
Gene sequence:
>564_bases ATGCAACGGCGCATGACCCAACTGGAATCCCTCGAACACTGGTTCACGCGCCTGTACGGGCGCATGGCGGGCGGGCGCAT GGCCGCCGCCTGCCTGGAGGACGGGCTGGAGCGCACGGCCCTGCGCTACGGTCATACGCCGGACATGCGGGAGGCGTACA ACCGGCGTCTCGACTGTTCGCCGCAGCACTGGCTCTCCGCCCGGGGGCTGATGCCGAAAAGCCTGCTGGAGAACGGCATC CCGTGGCTGGAGTGGATGGACGCGCATCCCGGCGACGATCCGGACAAGGCGTGGGACGCGGTCGCGATGCGACGCCTGGA CGACAAGCGGCGTCGCGGCGTGCGCCACGTGACGCCCACCCCGTTGTCCGACGGGTCGAACTCGACCGGCGGACGCCCCT ACGGGTTCAACGGGCGGCGCCGGTTCGAATCCCTGCTGGACATGGGACGTCTCGAATGGTCGCCCGGCATGGGCGCCGCC CCGGACATGGCCGCGGACGGGTTCGAAGACATGGTGCTCACGGCCGTCGACCTCGGCATCGACCCGACGACCATTCCCGT CTGA
Upstream 100 bases:
>100_bases TATCGTGCACGCGGTCGCATGGTCGACGGCGGGCGGCATGCCCCGGCCGGGCCGGCTTCCCGGCGTCGAATCTTCTTGAA ACCATGCGCCTCGGGGACGC
Downstream 100 bases:
>100_bases CGGACAGGCCGTCCGAAACCCCGTGGAGCCCCGCCAAGCGCCCGGCACAGCCCGACGGGCGCATAGCGGACCGCATGGTC ATGGACAGGAACGGCAGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MQRRMTQLESLEHWFTRLYGRMAGGRMAAACLEDGLERTALRYGHTPDMREAYNRRLDCSPQHWLSARGLMPKSLLENGI PWLEWMDAHPGDDPDKAWDAVAMRRLDDKRRRGVRHVTPTPLSDGSNSTGGRPYGFNGRRRFESLLDMGRLEWSPGMGAA PDMAADGFEDMVLTAVDLGIDPTTIPV
Sequences:
>Translated_187_residues MQRRMTQLESLEHWFTRLYGRMAGGRMAAACLEDGLERTALRYGHTPDMREAYNRRLDCSPQHWLSARGLMPKSLLENGI PWLEWMDAHPGDDPDKAWDAVAMRRLDDKRRRGVRHVTPTPLSDGSNSTGGRPYGFNGRRRFESLLDMGRLEWSPGMGAA PDMAADGFEDMVLTAVDLGIDPTTIPV >Mature_187_residues MQRRMTQLESLEHWFTRLYGRMAGGRMAAACLEDGLERTALRYGHTPDMREAYNRRLDCSPQHWLSARGLMPKSLLENGI PWLEWMDAHPGDDPDKAWDAVAMRRLDDKRRRGVRHVTPTPLSDGSNSTGGRPYGFNGRRRFESLLDMGRLEWSPGMGAA PDMAADGFEDMVLTAVDLGIDPTTIPV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21115; Mature: 21115
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 6.4 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 6.4 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRRMTQLESLEHWFTRLYGRMAGGRMAAACLEDGLERTALRYGHTPDMREAYNRRLDCS CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCC PQHWLSARGLMPKSLLENGIPWLEWMDAHPGDDPDKAWDAVAMRRLDDKRRRGVRHVTPT HHHHHHHCCCCHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC PLSDGSNSTGGRPYGFNGRRRFESLLDMGRLEWSPGMGAAPDMAADGFEDMVLTAVDLGI CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCHHHHHHHHHHCCC DPTTIPV CCCCCCC >Mature Secondary Structure MQRRMTQLESLEHWFTRLYGRMAGGRMAAACLEDGLERTALRYGHTPDMREAYNRRLDCS CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCC PQHWLSARGLMPKSLLENGIPWLEWMDAHPGDDPDKAWDAVAMRRLDDKRRRGVRHVTPT HHHHHHHCCCCHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC PLSDGSNSTGGRPYGFNGRRRFESLLDMGRLEWSPGMGAAPDMAADGFEDMVLTAVDLGI CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCHHHHHHHHHHCCC DPTTIPV CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA