| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692098
Identifier: 213692098
GI number: 213692098
Start: 1399577
End: 1400659
Strand: Reverse
Name: 213692098
Synonym: Blon_1217
Alternate gene names: NA
Gene position: 1400659-1399577 (Counterclockwise)
Preceding gene: 213692099
Following gene: 213692095
Centisome position: 49.45
GC content: 70.45
Gene sequence:
>1083_bases ATGGTCATGGACAGGAACGGCAGGGGCCACCGGGCGAAGGGCCTCCCCCAAGGGTACGCGGGCACCTACGAGCCGGCGTC CGGCACGTCGGGCGGAGACGTCATGCCGCCCGCCGCCGAGGACCTCGACCCGAAACGCTACGGGCACAAGAGGGCCGTCA GGCTTGTGAACTGGCGGGTCGAACACGATCCGACCAGCCTGTGGCTGCAAGACCGGCTCAAAGCCGTCAGGCCGGGCGTC GACAGGGACGGCAACCCGTTCGACTACCGGGACGAGCCGGTGCTCGACCCGGCCGACGAGGCGCGCATGATCGACGACGC GGTCTACCGGGAGGACGCGGACGGACGCCCGCACTACGGGCGGATCATGCGCGCCCTCGCCTCCTGGTATCCGAACGAGG CGGAACGCTTCGACATGGCGCGCAGAATCGCGGAGAACCGGTGCGACGCGCTGCGCCGCAACGTGATCGGCGACCCGACC CGATGCTACTCCGCCAGGCTCGTCGGCTACGCGCTCACCCGCCCCGTGCGCATGGAGGCGATCCTCGCCCGGCCGCCCTA CAATCTGAGCGCCCACCGGATGCGCGTCGGCAAACGGTACATGGACCGGATCGGCGCGTACGCGCGCGAACACGGCGGAC GACTGCCCGACAAAAGGCAGCGCGACCGGATCTGGGACGAGAACATGGGCGACTTCATCCACGAGAAGATAGCCAGGGGC GTCCAGTACGGGCGCGGCATGTACTATTCCGACGGGTCGAACGCGCGCCCCGAATACCATGGACGCCCGCCCCGCCTGGA CGCGGACGGGAAACCGTTCAACGCGCGCGAGGACTTCGAACGCATGCTGGCCGCCGGACGTGCGGAGCTCGACCGGACGC CCGGCGAATTCGACGACGTGGTCAACCGGATGGACGCGCATGACGCGTTCGCCTCGGGCGGCGCGGACGCGCACGCCGCA TGGACGGAGGCGCGCCGGCGCGGCCTGGACGTGCGCCTGATCGAGGATGCGCTCGGCGTGGACGCGTCGGACGCGGCCGC ATGGGAGGCGGAGTATCAGGCCTTGAGCTCGGGCGCCCGGTAG
Upstream 100 bases:
>100_bases TCGACCCGACGACCATTCCCGTCTGACGGACAGGCCGTCCGAAACCCCGTGGAGCCCCGCCAAGCGCCCGGCACAGCCCG ACGGGCGCATAGCGGACCGC
Downstream 100 bases:
>100_bases ACGCGGGGCACGGCCGCGCCCGCGGGCCACATGTCATGGTCGCGGGCGAACCGGACTATCACGTTGACGACGGTGTCGGG CATGGGCCGGGCGAGCATCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 360; Mature: 360
Protein sequence:
>360_residues MVMDRNGRGHRAKGLPQGYAGTYEPASGTSGGDVMPPAAEDLDPKRYGHKRAVRLVNWRVEHDPTSLWLQDRLKAVRPGV DRDGNPFDYRDEPVLDPADEARMIDDAVYREDADGRPHYGRIMRALASWYPNEAERFDMARRIAENRCDALRRNVIGDPT RCYSARLVGYALTRPVRMEAILARPPYNLSAHRMRVGKRYMDRIGAYAREHGGRLPDKRQRDRIWDENMGDFIHEKIARG VQYGRGMYYSDGSNARPEYHGRPPRLDADGKPFNAREDFERMLAAGRAELDRTPGEFDDVVNRMDAHDAFASGGADAHAA WTEARRRGLDVRLIEDALGVDASDAAAWEAEYQALSSGAR
Sequences:
>Translated_360_residues MVMDRNGRGHRAKGLPQGYAGTYEPASGTSGGDVMPPAAEDLDPKRYGHKRAVRLVNWRVEHDPTSLWLQDRLKAVRPGV DRDGNPFDYRDEPVLDPADEARMIDDAVYREDADGRPHYGRIMRALASWYPNEAERFDMARRIAENRCDALRRNVIGDPT RCYSARLVGYALTRPVRMEAILARPPYNLSAHRMRVGKRYMDRIGAYAREHGGRLPDKRQRDRIWDENMGDFIHEKIARG VQYGRGMYYSDGSNARPEYHGRPPRLDADGKPFNAREDFERMLAAGRAELDRTPGEFDDVVNRMDAHDAFASGGADAHAA WTEARRRGLDVRLIEDALGVDASDAAAWEAEYQALSSGAR >Mature_360_residues MVMDRNGRGHRAKGLPQGYAGTYEPASGTSGGDVMPPAAEDLDPKRYGHKRAVRLVNWRVEHDPTSLWLQDRLKAVRPGV DRDGNPFDYRDEPVLDPADEARMIDDAVYREDADGRPHYGRIMRALASWYPNEAERFDMARRIAENRCDALRRNVIGDPT RCYSARLVGYALTRPVRMEAILARPPYNLSAHRMRVGKRYMDRIGAYAREHGGRLPDKRQRDRIWDENMGDFIHEKIARG VQYGRGMYYSDGSNARPEYHGRPPRLDADGKPFNAREDFERMLAAGRAELDRTPGEFDDVVNRMDAHDAFASGGADAHAA WTEARRRGLDVRLIEDALGVDASDAAAWEAEYQALSSGAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40729; Mature: 40729
Theoretical pI: Translated: 7.36; Mature: 7.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVMDRNGRGHRAKGLPQGYAGTYEPASGTSGGDVMPPAAEDLDPKRYGHKRAVRLVNWRV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEE EHDPTSLWLQDRLKAVRPGVDRDGNPFDYRDEPVLDPADEARMIDDAVYREDADGRPHYG CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHH RIMRALASWYPNEAERFDMARRIAENRCDALRRNVIGDPTRCYSARLVGYALTRPVRMEA HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHH ILARPPYNLSAHRMRVGKRYMDRIGAYAREHGGRLPDKRQRDRIWDENMGDFIHEKIARG HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHHHHH VQYGRGMYYSDGSNARPEYHGRPPRLDADGKPFNAREDFERMLAAGRAELDRTPGEFDDV HHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHH VNRMDAHDAFASGGADAHAAWTEARRRGLDVRLIEDALGVDASDAAAWEAEYQALSSGAR HHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEHHHHHCCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MVMDRNGRGHRAKGLPQGYAGTYEPASGTSGGDVMPPAAEDLDPKRYGHKRAVRLVNWRV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEE EHDPTSLWLQDRLKAVRPGVDRDGNPFDYRDEPVLDPADEARMIDDAVYREDADGRPHYG CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHH RIMRALASWYPNEAERFDMARRIAENRCDALRRNVIGDPTRCYSARLVGYALTRPVRMEA HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHH ILARPPYNLSAHRMRVGKRYMDRIGAYAREHGGRLPDKRQRDRIWDENMGDFIHEKIARG HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHHHHH VQYGRGMYYSDGSNARPEYHGRPPRLDADGKPFNAREDFERMLAAGRAELDRTPGEFDDV HHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHH VNRMDAHDAFASGGADAHAAWTEARRRGLDVRLIEDALGVDASDAAAWEAEYQALSSGAR HHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEHHHHHCCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA