| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
Click here to switch to the map view.
The map label for this gene is 213692096
Identifier: 213692096
GI number: 213692096
Start: 1397706
End: 1399022
Strand: Direct
Name: 213692096
Synonym: Blon_1215
Alternate gene names: NA
Gene position: 1397706-1399022 (Clockwise)
Preceding gene: 213692094
Following gene: 213692097
Centisome position: 49.34
GC content: 72.36
Gene sequence:
>1317_bases ATGCATCCCCGGATGCATACGGATGCATACAGGCCGGCCGGAATGCATACAGGCCCGATGCCCGCCCCGGCGGACGCATA CACGGGGCCCATGAGACCATTCATCGACCATGACGGCCTGACCCTGTACAACACGGATGCCCGCCGCCTGCCCGACCTCC TCGACGCGCCCGCGGACGCGATCGTCACCGACCCGCCCTACGAGCTCGGCCTGGGCACCGCGGGCGAGGTGAAACGCTGG GACTCCACCGGCATCGCCTTCGACCCGGAATTCTGGACGGCCATGCTCGGCACGGTCCGCCCCGGCGCGTTCGCCCTCGT GTTCGGCTCGCCCCGCACCTGGCACCGGCTCGCCTGCGCCATGGAGGACGCGGGCTGGCTGATCCGCGACCAGATCAGCT GGCTGTACGCGTCAGGCATGCCGAAAGGCGAATGGGGCGACCATGCGGTCGACCGGGCGCTCGGCGTGAGGGACGACCGG ACCGGCGTCATACGGGACTCCGCGTCCCTGGAACGCAACGTCGCCTACACGGAACGCTACGAGGCGAAGACCCGCGAGGC GCGGCCCTGGCGCGGGTTCAATCCGGCGCTCAAACCCGCATGGGAGCCGATCCTCGTCGCCCAGCGCCCCCGCGAGTCCA TGCTCGGCCGCAACCTCATGGACCACGGGACGGGCGCCCTGAACGTGGCCGCCTGCGCCCTGGACGCGGACATGGGGGAG CTGGGGCGCCGCTACCGGCTCAACGCGACCGCCGGGGGGCGTCCGGACGCGCCGCGCGGCGGCGACACGTTCCGTGATTC GGGCACGCCCAGGCCCATGGGGCCGCGCATACCGGGCCGCCACCCGTCGAACGTCCTCATGGACAAGGCCATGGCCCGGC TCCTGCCCGCCGACGCGCCGCGCTTCTACTACTGTCCGAAAGCGCAGGACAGGCCCATACGCGCCCTGGAACGCCTCGTC CGCCCCCGGACACGGGACAAGGCGTGGAAGGCGTGCTGCGCGCGCCTGGGACTCGAATCCGGGGCGGACGCGTACCCCGC GTGCCTGCTCGACGCGGAGGCGCTCGCCCTGACCGTGCCGGTGGGCGAAAGACGGCTCGCCCATCCGACCGTCAAACCCC TGGACCTGACCCGATGGCTCGCCCGCCTCGCATGCCCGCCCCACGGCCTCGTCCTCGACCCGTTCGCCGGCTCCGGCACC ACGCTGGACGCATGCCGGCGGGAAGGCCTGCGGTGCGCGGCCACGGAGCTCGACCCCACGTACCTGCCGCTCACGGCCGA CCGGCTCGAACGCCCCGCAAGCCTCCCGCTCTTCTAG
Upstream 100 bases:
>100_bases TCTTTCGAATCCTCTATAAGGGAATGATGCATACAATGCATACACGCCCCGGACCACCCCCGGAACGTTGGAACCAAGCC GAAACGGGAAGAAAAGATGT
Downstream 100 bases:
>100_bases CGGACGGGGGAACGCATACCCGGGGGCACACAACACCGTGGAAACGGAGGAACGGCAATGGAAGACTACATGAACCTGGC CCACGAGTGGGTCGCACGCC
Product: DNA methylase N-4/N-6 domain protein
Products: NA
Alternate protein names: Methylase; DNA Methylase N-4/N-6 Domain-Containing Protein; Site-Specific DNA Methyltransferase; DNA Methylase
Number of amino acids: Translated: 438; Mature: 438
Protein sequence:
>438_residues MHPRMHTDAYRPAGMHTGPMPAPADAYTGPMRPFIDHDGLTLYNTDARRLPDLLDAPADAIVTDPPYELGLGTAGEVKRW DSTGIAFDPEFWTAMLGTVRPGAFALVFGSPRTWHRLACAMEDAGWLIRDQISWLYASGMPKGEWGDHAVDRALGVRDDR TGVIRDSASLERNVAYTERYEAKTREARPWRGFNPALKPAWEPILVAQRPRESMLGRNLMDHGTGALNVAACALDADMGE LGRRYRLNATAGGRPDAPRGGDTFRDSGTPRPMGPRIPGRHPSNVLMDKAMARLLPADAPRFYYCPKAQDRPIRALERLV RPRTRDKAWKACCARLGLESGADAYPACLLDAEALALTVPVGERRLAHPTVKPLDLTRWLARLACPPHGLVLDPFAGSGT TLDACRREGLRCAATELDPTYLPLTADRLERPASLPLF
Sequences:
>Translated_438_residues MHPRMHTDAYRPAGMHTGPMPAPADAYTGPMRPFIDHDGLTLYNTDARRLPDLLDAPADAIVTDPPYELGLGTAGEVKRW DSTGIAFDPEFWTAMLGTVRPGAFALVFGSPRTWHRLACAMEDAGWLIRDQISWLYASGMPKGEWGDHAVDRALGVRDDR TGVIRDSASLERNVAYTERYEAKTREARPWRGFNPALKPAWEPILVAQRPRESMLGRNLMDHGTGALNVAACALDADMGE LGRRYRLNATAGGRPDAPRGGDTFRDSGTPRPMGPRIPGRHPSNVLMDKAMARLLPADAPRFYYCPKAQDRPIRALERLV RPRTRDKAWKACCARLGLESGADAYPACLLDAEALALTVPVGERRLAHPTVKPLDLTRWLARLACPPHGLVLDPFAGSGT TLDACRREGLRCAATELDPTYLPLTADRLERPASLPLF >Mature_438_residues MHPRMHTDAYRPAGMHTGPMPAPADAYTGPMRPFIDHDGLTLYNTDARRLPDLLDAPADAIVTDPPYELGLGTAGEVKRW DSTGIAFDPEFWTAMLGTVRPGAFALVFGSPRTWHRLACAMEDAGWLIRDQISWLYASGMPKGEWGDHAVDRALGVRDDR TGVIRDSASLERNVAYTERYEAKTREARPWRGFNPALKPAWEPILVAQRPRESMLGRNLMDHGTGALNVAACALDADMGE LGRRYRLNATAGGRPDAPRGGDTFRDSGTPRPMGPRIPGRHPSNVLMDKAMARLLPADAPRFYYCPKAQDRPIRALERLV RPRTRDKAWKACCARLGLESGADAYPACLLDAEALALTVPVGERRLAHPTVKPLDLTRWLARLACPPHGLVLDPFAGSGT TLDACRREGLRCAATELDPTYLPLTADRLERPASLPLF
Specific function: Unknown
COG id: COG0863
COG function: function code L; DNA modification methylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48210; Mature: 48210
Theoretical pI: Translated: 8.32; Mature: 8.32
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPRMHTDAYRPAGMHTGPMPAPADAYTGPMRPFIDHDGLTLYNTDARRLPDLLDAPADA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHCHHHHCCCCCC IVTDPPYELGLGTAGEVKRWDSTGIAFDPEFWTAMLGTVRPGAFALVFGSPRTWHRLACA EECCCCHHHCCCCCCCCEECCCCCCEECHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHH MEDAGWLIRDQISWLYASGMPKGEWGDHAVDRALGVRDDRTGVIRDSASLERNVAYTERY HHCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCEEEECCHHHHHCCHHHHHH EAKTREARPWRGFNPALKPAWEPILVAQRPRESMLGRNLMDHGTGALNVAACALDADMGE HHHCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHCCHHHHCCCCCEEHHHHHHCCCHHH LGRRYRLNATAGGRPDAPRGGDTFRDSGTPRPMGPRIPGRHPSNVLMDKAMARLLPADAP CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC RFYYCPKAQDRPIRALERLVRPRTRDKAWKACCARLGLESGADAYPACLLDAEALALTVP CEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCHHHCCCCEEEEECC VGERRLAHPTVKPLDLTRWLARLACPPHGLVLDPFAGSGTTLDACRREGLRCAATELDPT CCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHCCCEEEECCCCCC YLPLTADRLERPASLPLF CCCCCHHHHCCCCCCCCC >Mature Secondary Structure MHPRMHTDAYRPAGMHTGPMPAPADAYTGPMRPFIDHDGLTLYNTDARRLPDLLDAPADA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHCHHHHCCCCCC IVTDPPYELGLGTAGEVKRWDSTGIAFDPEFWTAMLGTVRPGAFALVFGSPRTWHRLACA EECCCCHHHCCCCCCCCEECCCCCCEECHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHH MEDAGWLIRDQISWLYASGMPKGEWGDHAVDRALGVRDDRTGVIRDSASLERNVAYTERY HHCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCEEEECCHHHHHCCHHHHHH EAKTREARPWRGFNPALKPAWEPILVAQRPRESMLGRNLMDHGTGALNVAACALDADMGE HHHCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHCCHHHHCCCCCEEHHHHHHCCCHHH LGRRYRLNATAGGRPDAPRGGDTFRDSGTPRPMGPRIPGRHPSNVLMDKAMARLLPADAP CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC RFYYCPKAQDRPIRALERLVRPRTRDKAWKACCARLGLESGADAYPACLLDAEALALTVP CEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCHHHCCCCEEEEECC VGERRLAHPTVKPLDLTRWLARLACPPHGLVLDPFAGSGTTLDACRREGLRCAATELDPT CCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHCCCEEEECCCCCC YLPLTADRLERPASLPLF CCCCCHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA