| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692093
Identifier: 213692093
GI number: 213692093
Start: 1395619
End: 1396287
Strand: Direct
Name: 213692093
Synonym: Blon_1212
Alternate gene names: NA
Gene position: 1395619-1396287 (Clockwise)
Preceding gene: 213692092
Following gene: 213692094
Centisome position: 49.27
GC content: 66.22
Gene sequence:
>669_bases ATGGCAGACCAGAACCAGCAGGCGGAACGCCTGAACTTCGTGACCGTGCCGGGAATCGCTAACTTCCCGCACCTGTTCGA ACCCGATTCGAAGAACGGCAAGTACACGCTGACCGTGCTGTTCGACAAGAAGGATCCCGCGGTCTCGCAGATGATGCGCG ACCTGCAGGCCAAATGCGCGGAGGCGATCCGGCGCGGCATCGACGGCGAACCCGGCAGGGACGGCAAGTCGTACGCGCCG TTCTCCGGCCACTCCATGGACGACAAGGAGTGGGTGGGGCGCCTGCGCCTGCCCGTGGAGGACGGGGACACGGCCAAGTT CGACCGCGGCGACAACGTGGGCAAGCTGAAGAAGGACGTGTACGAGGAGTATGAGGGCCGTTGGGTGCTCAAGACCGGCA CGAAGACCGATCTCGCCGCGGCCGGCTGGGTCGTGGATTCGAACCGTCGCCGTCTGACCGCCGCCGACCTGTATTCGGGC GCCATCGTGCGCGTCAACGTGTGGCTGTACGCGTACAAGCAGGACAATTCGGGCGTGGGAGCCATGCTCAACGCGGTCGT GAAGACGGGCGACGGGGAGCGTATCGGCGGGGAGACCGATCCGCTGGCCGCGTTCGGCCTGCCGGACGCGCAGGATGCGT CGAACCCGTTCGCGGGCATGGGCGTCTGA
Upstream 100 bases:
>100_bases AGGCCGGAAAGCATCCGCGCGTGAGCCGGGGACGCATACCGGGGCGTGACGGCGCGCCGACGCCGCCGACATGGACCAAT CGTGAAAGGAGCCATGGGAC
Downstream 100 bases:
>100_bases CCGGAGGGGAGGCGCATCATAGCGGATATGGTTCTCACCCCGTATGAGACGTTCGACGAATCGTCGGGCGTGCACGTCCT GTGGGATTCGAGCCGTGACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 222; Mature: 221
Protein sequence:
>222_residues MADQNQQAERLNFVTVPGIANFPHLFEPDSKNGKYTLTVLFDKKDPAVSQMMRDLQAKCAEAIRRGIDGEPGRDGKSYAP FSGHSMDDKEWVGRLRLPVEDGDTAKFDRGDNVGKLKKDVYEEYEGRWVLKTGTKTDLAAAGWVVDSNRRRLTAADLYSG AIVRVNVWLYAYKQDNSGVGAMLNAVVKTGDGERIGGETDPLAAFGLPDAQDASNPFAGMGV
Sequences:
>Translated_222_residues MADQNQQAERLNFVTVPGIANFPHLFEPDSKNGKYTLTVLFDKKDPAVSQMMRDLQAKCAEAIRRGIDGEPGRDGKSYAP FSGHSMDDKEWVGRLRLPVEDGDTAKFDRGDNVGKLKKDVYEEYEGRWVLKTGTKTDLAAAGWVVDSNRRRLTAADLYSG AIVRVNVWLYAYKQDNSGVGAMLNAVVKTGDGERIGGETDPLAAFGLPDAQDASNPFAGMGV >Mature_221_residues ADQNQQAERLNFVTVPGIANFPHLFEPDSKNGKYTLTVLFDKKDPAVSQMMRDLQAKCAEAIRRGIDGEPGRDGKSYAPF SGHSMDDKEWVGRLRLPVEDGDTAKFDRGDNVGKLKKDVYEEYEGRWVLKTGTKTDLAAAGWVVDSNRRRLTAADLYSGA IVRVNVWLYAYKQDNSGVGAMLNAVVKTGDGERIGGETDPLAAFGLPDAQDASNPFAGMGV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24277; Mature: 24146
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADQNQQAERLNFVTVPGIANFPHLFEPDSKNGKYTLTVLFDKKDPAVSQMMRDLQAKCA CCCCCCCHHHEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHH EAIRRGIDGEPGRDGKSYAPFSGHSMDDKEWVGRLRLPVEDGDTAKFDRGDNVGKLKKDV HHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCEEECCCCCCCCCCCCCCCCHHHHHHHH YEEYEGRWVLKTGTKTDLAAAGWVVDSNRRRLTAADLYSGAIVRVNVWLYAYKQDNSGVG HHHHCCEEEEEECCCCCCEEECEEEECCCCEEEHHHHHCCEEEEEEEEEEEEEECCCCHH AMLNAVVKTGDGERIGGETDPLAAFGLPDAQDASNPFAGMGV HHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure ADQNQQAERLNFVTVPGIANFPHLFEPDSKNGKYTLTVLFDKKDPAVSQMMRDLQAKCA CCCCCCHHHEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHH EAIRRGIDGEPGRDGKSYAPFSGHSMDDKEWVGRLRLPVEDGDTAKFDRGDNVGKLKKDV HHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCEEECCCCCCCCCCCCCCCCHHHHHHHH YEEYEGRWVLKTGTKTDLAAAGWVVDSNRRRLTAADLYSGAIVRVNVWLYAYKQDNSGVG HHHHCCEEEEEECCCCCCEEECEEEECCCCEEEHHHHHCCEEEEEEEEEEEEEECCCCHH AMLNAVVKTGDGERIGGETDPLAAFGLPDAQDASNPFAGMGV HHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA