| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692071
Identifier: 213692071
GI number: 213692071
Start: 1373237
End: 1374064
Strand: Reverse
Name: 213692071
Synonym: Blon_1189
Alternate gene names: NA
Gene position: 1374064-1373237 (Counterclockwise)
Preceding gene: 213692075
Following gene: 213692070
Centisome position: 48.51
GC content: 69.2
Gene sequence:
>828_bases ATGAACGGTTTGAAACCATACACGGTCCCGTTCACGGTGTCCGCCTCCCTGTGGATGACGACCACCGGCGACGAGGACGT GACCGAGCGGAAACGGCGGCGGGGACGCCTGCGCGCCTACGGACGGCAGGTGTGGCGGGAGATGAAGGCCGCGGGCGCGC CCCGGGTCAACCGGTACATGATGCTCGTCACCGTGGGCGGGCGACGCGAAAGCCCCGTACTGGCGGCCGAGACCCTGAAG CCCCTGATCGACGCTGGCACCGACGAGGGGCTGTGGCCGGACGACGACCCGTACCATCGCGTGATGACCTGCTATCTCAG GGACCCCCGCCCCCTGCCGGGCGGACGCGCGGAACTGTTCATCTGGGTGATCCCATTGGGGCCGGACACGGACCCGTTGT CCCGGCTGCTCGCCCTCATGCCCGGTTCGAAAGCGACCCTGGCCCATGCCACGTTCGGCGAGGACTCATGGCTGACCAGC AACATGCGCCTGACGGCCCGGGAGCGCAAGACCATGCAGACGCGCGCCATGCGCGCATGCAGGAACGTGTGGAAGGCATC GCCGGGCGCGGACTGCGGGGTCGTCTGCCAGGTCCGCTACCCGGACTCCCGGCCCCGGTACAAGGGCGACCCGGACAACA CGGCGGAGACGGCGACCGCCATGTGGGGCGTCGGCGTGCTCGCCGGGCTCCTGCCCGCCAGTCCCAGCATCTTCTGCTTC ATGCTCGCCAACGGGGAATCCGAACCGAAGCACCATGATCTCGACATGCTCGCGTTCACCACGCCGCCGGACGTGGACTG GCCGGGCCTGCTGCTCGGGGACGCATAG
Upstream 100 bases:
>100_bases CGAAACGGGAAGAAAAAATGTATGCATCCCCGGATGCATACGGATGCATACAGGCCGGCCGGAATGCATACACGGCCCGG GGCCGGCATAGCCGCGCCGC
Downstream 100 bases:
>100_bases GAACATGGCGAAACGCAACCGACCGACGGGAGGCCATCATGGTGATGGACAGGAACAACAGGAGCCACAAGCCGAAGGGC ACGCCCGACGGCGGCCAATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MNGLKPYTVPFTVSASLWMTTTGDEDVTERKRRRGRLRAYGRQVWREMKAAGAPRVNRYMMLVTVGGRRESPVLAAETLK PLIDAGTDEGLWPDDDPYHRVMTCYLRDPRPLPGGRAELFIWVIPLGPDTDPLSRLLALMPGSKATLAHATFGEDSWLTS NMRLTARERKTMQTRAMRACRNVWKASPGADCGVVCQVRYPDSRPRYKGDPDNTAETATAMWGVGVLAGLLPASPSIFCF MLANGESEPKHHDLDMLAFTTPPDVDWPGLLLGDA
Sequences:
>Translated_275_residues MNGLKPYTVPFTVSASLWMTTTGDEDVTERKRRRGRLRAYGRQVWREMKAAGAPRVNRYMMLVTVGGRRESPVLAAETLK PLIDAGTDEGLWPDDDPYHRVMTCYLRDPRPLPGGRAELFIWVIPLGPDTDPLSRLLALMPGSKATLAHATFGEDSWLTS NMRLTARERKTMQTRAMRACRNVWKASPGADCGVVCQVRYPDSRPRYKGDPDNTAETATAMWGVGVLAGLLPASPSIFCF MLANGESEPKHHDLDMLAFTTPPDVDWPGLLLGDA >Mature_275_residues MNGLKPYTVPFTVSASLWMTTTGDEDVTERKRRRGRLRAYGRQVWREMKAAGAPRVNRYMMLVTVGGRRESPVLAAETLK PLIDAGTDEGLWPDDDPYHRVMTCYLRDPRPLPGGRAELFIWVIPLGPDTDPLSRLLALMPGSKATLAHATFGEDSWLTS NMRLTARERKTMQTRAMRACRNVWKASPGADCGVVCQVRYPDSRPRYKGDPDNTAETATAMWGVGVLAGLLPASPSIFCF MLANGESEPKHHDLDMLAFTTPPDVDWPGLLLGDA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30504; Mature: 30504
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGLKPYTVPFTVSASLWMTTTGDEDVTERKRRRGRLRAYGRQVWREMKAAGAPRVNRYM CCCCCCEEEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE MLVTVGGRRESPVLAAETLKPLIDAGTDEGLWPDDDPYHRVMTCYLRDPRPLPGGRAELF EEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHEEEEEEECCCCCCCCCCEEEE IWVIPLGPDTDPLSRLLALMPGSKATLAHATFGEDSWLTSNMRLTARERKTMQTRAMRAC EEEEECCCCCCHHHHHHHHCCCCCCEEEEEECCCCCEEECCEEEEHHHHHHHHHHHHHHH RNVWKASPGADCGVVCQVRYPDSRPRYKGDPDNTAETATAMWGVGVLAGLLPASPSIFCF HHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEE MLANGESEPKHHDLDMLAFTTPPDVDWPGLLLGDA EEECCCCCCCCCCCEEEEECCCCCCCCCCEEECCC >Mature Secondary Structure MNGLKPYTVPFTVSASLWMTTTGDEDVTERKRRRGRLRAYGRQVWREMKAAGAPRVNRYM CCCCCCEEEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE MLVTVGGRRESPVLAAETLKPLIDAGTDEGLWPDDDPYHRVMTCYLRDPRPLPGGRAELF EEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHEEEEEEECCCCCCCCCCEEEE IWVIPLGPDTDPLSRLLALMPGSKATLAHATFGEDSWLTSNMRLTARERKTMQTRAMRAC EEEEECCCCCCHHHHHHHHCCCCCCEEEEEECCCCCEEECCEEEEHHHHHHHHHHHHHHH RNVWKASPGADCGVVCQVRYPDSRPRYKGDPDNTAETATAMWGVGVLAGLLPASPSIFCF HHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEE MLANGESEPKHHDLDMLAFTTPPDVDWPGLLLGDA EEECCCCCCCCCCCEEEEECCCCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA