| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692068
Identifier: 213692068
GI number: 213692068
Start: 1371296
End: 1371586
Strand: Direct
Name: 213692068
Synonym: Blon_1186
Alternate gene names: NA
Gene position: 1371296-1371586 (Clockwise)
Preceding gene: 213692067
Following gene: 213692072
Centisome position: 48.41
GC content: 62.89
Gene sequence:
>291_bases ATGGCGGCGGTGAGGGAGAACACGGTGGAACGCCGGTTCAACATGCTGGCGAGACGGCATGGGGGACTGTCCCTGAAATG GGTGTCGCCCGGACGATTGGGCGTGCCCGACCGTCTCCTGTTCATGCCCGGCGGCAGGCTGTATCTCGTGGAACTGAAAC GGCCGGGAGGAAAGCCCAGGGCTAGCCAGAACGCCATGTTCGCGAAACTCGAAACACGCGGCTTCCACGTGTGGGTCGTG GACGATCCGGACGCGTTCTTCGACATGATCATGGGGGATGGGGTCGGATAG
Upstream 100 bases:
>100_bases ACGCGCGCGTGCTGGAGGCGGCCGGCTTCCCGGAACGGGCGCGCCTGATCCGCATGCTCCCCGTCGAGCCGGACGGGCCG GACGCGCGGAGGGGGTTCGG
Downstream 100 bases:
>100_bases TCCGGGGCGCGTCTTCACGGCCGCAATGCATGCGCGACGGCCCCGCCTCCCTTCCGGAATGCGGGGCCGTCGCGGTTTCC ATATCAGGCGAGATCGTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: VRR-NUC Domain Protein; Phage Associated Protein; APSE-2 Prophage
Number of amino acids: Translated: 96; Mature: 95
Protein sequence:
>96_residues MAAVRENTVERRFNMLARRHGGLSLKWVSPGRLGVPDRLLFMPGGRLYLVELKRPGGKPRASQNAMFAKLETRGFHVWVV DDPDAFFDMIMGDGVG
Sequences:
>Translated_96_residues MAAVRENTVERRFNMLARRHGGLSLKWVSPGRLGVPDRLLFMPGGRLYLVELKRPGGKPRASQNAMFAKLETRGFHVWVV DDPDAFFDMIMGDGVG >Mature_95_residues AAVRENTVERRFNMLARRHGGLSLKWVSPGRLGVPDRLLFMPGGRLYLVELKRPGGKPRASQNAMFAKLETRGFHVWVVD DPDAFFDMIMGDGVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10772; Mature: 10641
Theoretical pI: Translated: 11.10; Mature: 11.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAVRENTVERRFNMLARRHGGLSLKWVSPGRLGVPDRLLFMPGGRLYLVELKRPGGKPR CCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEECCCCEEEEEEEECCCCCCC ASQNAMFAKLETRGFHVWVVDDPDAFFDMIMGDGVG CCCCEEEEEEECCCEEEEEECCCHHHHHHHHCCCCC >Mature Secondary Structure AAVRENTVERRFNMLARRHGGLSLKWVSPGRLGVPDRLLFMPGGRLYLVELKRPGGKPR CCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEECCCCEEEEEEEECCCCCCC ASQNAMFAKLETRGFHVWVVDDPDAFFDMIMGDGVG CCCCEEEEEEECCCEEEEEECCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA