| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
Click here to switch to the map view.
The map label for this gene is 213692057
Identifier: 213692057
GI number: 213692057
Start: 1361232
End: 1361465
Strand: Reverse
Name: 213692057
Synonym: Blon_1175
Alternate gene names: NA
Gene position: 1361465-1361232 (Counterclockwise)
Preceding gene: 213692058
Following gene: 213692050
Centisome position: 48.06
GC content: 67.09
Gene sequence:
>234_bases ATGGGTGTCCATCGTGTTTCCCGTCGTAAGGAGCCTGACATGGCCGACAAGCCGTTCGTCCCCGTCGAGCATCGTCTCGC GCTGACCGTCCCCGAGGCGGCGGCCCTGTGCGGCATCCCGGAGAAGGTGGTGCGCGCCGCGGTCGTGCACGGCGATCTGA GGCATTTCGAGAAGGGGTCCACGACGGCCCGCATCCGCAGGACGGATCTGGAGGACTGGGTGGCCTTGCTGTGA
Upstream 100 bases:
>100_bases GCTGAGGGAGAAGGCGTCCATGTCGGCCGTCATGTGACGCATGGCGTCCGTCCGCCTCCGGACGCGGGTCCCAGACGTCC TTTGCGGGAAACGCATATCC
Downstream 100 bases:
>100_bases GCCCGACACGGGATAGGCACACTTAGGCACACATGCCGTGTATGATGTTCTCCAGATGCGCGTGATTCCGCCATTCCGTG GTGCCGGCTGGCTTAATGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 77; Mature: 76
Protein sequence:
>77_residues MGVHRVSRRKEPDMADKPFVPVEHRLALTVPEAAALCGIPEKVVRAAVVHGDLRHFEKGSTTARIRRTDLEDWVALL
Sequences:
>Translated_77_residues MGVHRVSRRKEPDMADKPFVPVEHRLALTVPEAAALCGIPEKVVRAAVVHGDLRHFEKGSTTARIRRTDLEDWVALL >Mature_76_residues GVHRVSRRKEPDMADKPFVPVEHRLALTVPEAAALCGIPEKVVRAAVVHGDLRHFEKGSTTARIRRTDLEDWVALL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8623; Mature: 8492
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVHRVSRRKEPDMADKPFVPVEHRLALTVPEAAALCGIPEKVVRAAVVHGDLRHFEKGS CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHCCCCHHHHHHHHHHHHHHHHCCCC TTARIRRTDLEDWVALL CEEEEECCCHHHHHHCC >Mature Secondary Structure GVHRVSRRKEPDMADKPFVPVEHRLALTVPEAAALCGIPEKVVRAAVVHGDLRHFEKGS CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHCCCCHHHHHHHHHHHHHHHHCCCC TTARIRRTDLEDWVALL CEEEEECCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA