| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
Click here to switch to the map view.
The map label for this gene is purH [H]
Identifier: 213692046
GI number: 213692046
Start: 1345483
End: 1347036
Strand: Direct
Name: purH [H]
Synonym: Blon_1164
Alternate gene names: 213692046
Gene position: 1345483-1347036 (Clockwise)
Preceding gene: 213692045
Following gene: 213692048
Centisome position: 47.5
GC content: 64.67
Gene sequence:
>1554_bases GTGAAGGCCGGCACCGAAGTCGTTTCCACCGGTTCGACCGCCAGGAAGCTCGCCGAGCTGGGCGTCAAGGTAACCGAGGT GTCCGATGTCACCGGATTCCCCGAATGCCTCGACGGCCGCGTCAAGACGCTGCATCCGTACATTCACGCCGGCATTCTAG CTGATATGACCAACCCCGAACACGCCAAGCAGCTTGACGGCTTCGGCATCAAGCCGTTTGATCTGGTGGTCGTCAACCTG TACCCATTCGCCGACACCGTTCGCTCCGGTGCCAACGAAGCCGACACCATCGAGAAGATCGATATCGGCGGCCCCTCCAT GGTGCGTGGCGCGGCCAAGAACCACGCCACCGTGGCCATCGTCACCGATCCGGCCGATTACGCCTTGGTCGCCGAGCGTG TGGCCGACGGCACCGGCTTCTCCCTCGACGAGCGCAAGTGGCTTGCCGCCAAGGCATTCGCCCACACCGCCGCCTATGAC GCCACCATCAACGAATGGACCGCCAAGCACTGGCCGAAGCCGGCTTCACTGGACACCGCCGAAGTGGACAAGGACGATCA GGACACTGAAATCGATTCCGCCAAGTTCCCGGCACGATTCACCCGCACCTGGGACCGCGCCCACACCCTGCGCTACGGCG AGAACTCCCACCAGCAGGCCGCCCTCTACATTGACCCGCTCAACCAGACCGGTTTCGCCCACGCCGAGCAGCTCGGCGGC AAGCCGATGAGCTACAACAACTACGTGGACGCGGACGCCGCCTGGCGCACCGTATGGGATATGGCTCCCGCCATTGCCGT GGCCGTAGTCAAGCACAACAATCCGTGCGGTCTGGCCATTGGCGCGACCGTGGCCGAGGCCCACAAGAAGGCTCACGCCT GCGACCCGATGAGCGCCTACGGCGGTGTGATCGCCTGCAACTCCAAGGTCACTCTTGAGATGGCCGAAAGCGTGCGCCCG ATTTTCACCGAAGTCATCGTCGCCCCCGACTATGAGCCGGCCGCGCTCGAACTGCTGCAGACCAAGAAGAAGAACCTGCG CATCCTCAAGGTGGCCGAGCCGCCGAAGGGCCACGAGGCCATCCGCCAGATCGATGGCGGCCTGCTTGTGCAGGACACTG ATCTGATCAACGCCGTCGGCGACGATCCGGACGCCTGGAAGCTCGTGGCCGGCGAGGCCGCCGACGCCGACACGCTGAAG GACCTCGTGTTCGCATGGCGTGCAATCCGCTGCGTGAAGTCCAACGCCATCCTGCTGGCCCACGACCAGGCCACGGTTGG CATCGGCATGGGCCAAGTCAACCGCGTGGACTCCTGCCATCTGGCCGTCGAGCGCGCCAACACACTGGCCGATGGTGCCG ATCGCGCCACCGGTGCGGTCGCGGCATCCGATGCGTTCTTCCCGTTCGCCGATGGTGCCCAGGTGCTTATCGACGCGGGC GTCAAGGCAATCGTGCAGCCTGGCGGCTCCATCCGCGATGAGGAGGTCATCGAAGCGGCCAATAAGGCCGGCGTGACCAT GTACCTCACCGGCACCCGCCACTTCTTCCACTGA
Upstream 100 bases:
>100_bases TCCAAGGAGGAACAGGATGACAAACACGAACCGACCGATCCGTCGGGCACTGGTCTCGGTCTTTCATAAGGAAGGCATCG AAGTACTCGCGGAAGCGTTC
Downstream 100 bases:
>100_bases TCGGGACTCTCTGAGGAGAGCAGCTCAGCCAAAACGCACAAAGGTGGGATTCCGCCTGGACCCGTTGACGGGTCCAGGCG GAATCCCACCTTTGCTATTC
Product: bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
Products: NA
Alternate protein names: Phosphoribosylaminoimidazolecarboxamide formyltransferase; AICAR transformylase; IMP cyclohydrolase; ATIC; IMP synthase; Inosinicase [H]
Number of amino acids: Translated: 517; Mature: 517
Protein sequence:
>517_residues MKAGTEVVSTGSTARKLAELGVKVTEVSDVTGFPECLDGRVKTLHPYIHAGILADMTNPEHAKQLDGFGIKPFDLVVVNL YPFADTVRSGANEADTIEKIDIGGPSMVRGAAKNHATVAIVTDPADYALVAERVADGTGFSLDERKWLAAKAFAHTAAYD ATINEWTAKHWPKPASLDTAEVDKDDQDTEIDSAKFPARFTRTWDRAHTLRYGENSHQQAALYIDPLNQTGFAHAEQLGG KPMSYNNYVDADAAWRTVWDMAPAIAVAVVKHNNPCGLAIGATVAEAHKKAHACDPMSAYGGVIACNSKVTLEMAESVRP IFTEVIVAPDYEPAALELLQTKKKNLRILKVAEPPKGHEAIRQIDGGLLVQDTDLINAVGDDPDAWKLVAGEAADADTLK DLVFAWRAIRCVKSNAILLAHDQATVGIGMGQVNRVDSCHLAVERANTLADGADRATGAVAASDAFFPFADGAQVLIDAG VKAIVQPGGSIRDEEVIEAANKAGVTMYLTGTRHFFH
Sequences:
>Translated_517_residues MKAGTEVVSTGSTARKLAELGVKVTEVSDVTGFPECLDGRVKTLHPYIHAGILADMTNPEHAKQLDGFGIKPFDLVVVNL YPFADTVRSGANEADTIEKIDIGGPSMVRGAAKNHATVAIVTDPADYALVAERVADGTGFSLDERKWLAAKAFAHTAAYD ATINEWTAKHWPKPASLDTAEVDKDDQDTEIDSAKFPARFTRTWDRAHTLRYGENSHQQAALYIDPLNQTGFAHAEQLGG KPMSYNNYVDADAAWRTVWDMAPAIAVAVVKHNNPCGLAIGATVAEAHKKAHACDPMSAYGGVIACNSKVTLEMAESVRP IFTEVIVAPDYEPAALELLQTKKKNLRILKVAEPPKGHEAIRQIDGGLLVQDTDLINAVGDDPDAWKLVAGEAADADTLK DLVFAWRAIRCVKSNAILLAHDQATVGIGMGQVNRVDSCHLAVERANTLADGADRATGAVAASDAFFPFADGAQVLIDAG VKAIVQPGGSIRDEEVIEAANKAGVTMYLTGTRHFFH >Mature_517_residues MKAGTEVVSTGSTARKLAELGVKVTEVSDVTGFPECLDGRVKTLHPYIHAGILADMTNPEHAKQLDGFGIKPFDLVVVNL YPFADTVRSGANEADTIEKIDIGGPSMVRGAAKNHATVAIVTDPADYALVAERVADGTGFSLDERKWLAAKAFAHTAAYD ATINEWTAKHWPKPASLDTAEVDKDDQDTEIDSAKFPARFTRTWDRAHTLRYGENSHQQAALYIDPLNQTGFAHAEQLGG KPMSYNNYVDADAAWRTVWDMAPAIAVAVVKHNNPCGLAIGATVAEAHKKAHACDPMSAYGGVIACNSKVTLEMAESVRP IFTEVIVAPDYEPAALELLQTKKKNLRILKVAEPPKGHEAIRQIDGGLLVQDTDLINAVGDDPDAWKLVAGEAADADTLK DLVFAWRAIRCVKSNAILLAHDQATVGIGMGQVNRVDSCHLAVERANTLADGADRATGAVAASDAFFPFADGAQVLIDAG VKAIVQPGGSIRDEEVIEAANKAGVTMYLTGTRHFFH
Specific function: De novo purine biosynthesis; ninth step. De novo purine biosynthesis; tenth step. [C]
COG id: COG0138
COG function: function code F; AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purH family [H]
Homologues:
Organism=Homo sapiens, GI20127454, Length=604, Percent_Identity=29.8013245033113, Blast_Score=207, Evalue=2e-53, Organism=Escherichia coli, GI1790439, Length=526, Percent_Identity=44.106463878327, Blast_Score=389, Evalue=1e-109, Organism=Caenorhabditis elegans, GI71985564, Length=486, Percent_Identity=32.9218106995885, Blast_Score=203, Evalue=2e-52, Organism=Caenorhabditis elegans, GI71985574, Length=335, Percent_Identity=28.3582089552239, Blast_Score=87, Evalue=2e-17, Organism=Saccharomyces cerevisiae, GI6323768, Length=476, Percent_Identity=32.1428571428571, Blast_Score=200, Evalue=5e-52, Organism=Saccharomyces cerevisiae, GI6323056, Length=470, Percent_Identity=31.7021276595745, Blast_Score=195, Evalue=2e-50, Organism=Drosophila melanogaster, GI24649832, Length=472, Percent_Identity=32.2033898305085, Blast_Score=193, Evalue=2e-49,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 640 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002695 - InterPro: IPR013982 - InterPro: IPR016193 - InterPro: IPR011607 [H]
Pfam domain/function: PF01808 AICARFT_IMPCHas; PF02142 MGS [H]
EC number: =2.1.2.3; =3.5.4.10 [H]
Molecular weight: Translated: 55353; Mature: 55353
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAGTEVVSTGSTARKLAELGVKVTEVSDVTGFPECLDGRVKTLHPYIHAGILADMTNPE CCCCCCHHCCCHHHHHHHHCCCEEEEECCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCH HAKQLDGFGIKPFDLVVVNLYPFADTVRSGANEADTIEKIDIGGPSMVRGAAKNHATVAI HHHHCCCCCCCCEEEEEEEEECCHHHHHCCCCCCCCEEEEECCCHHHHHCCCCCCEEEEE VTDPADYALVAERVADGTGFSLDERKWLAAKAFAHTAAYDATINEWTAKHWPKPASLDTA EECCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHH EVDKDDQDTEIDSAKFPARFTRTWDRAHTLRYGENSHQQAALYIDPLNQTGFAHAEQLGG HCCCCCCCCCCCCCCCCHHHHHHHHHHHHEECCCCCCCEEEEEEECCCCCCCHHHHHHCC KPMSYNNYVDADAAWRTVWDMAPAIAVAVVKHNNPCGLAIGATVAEAHKKAHACDPMSAY CCCCCCCCCCCCHHHHHHHHHHHEEEEEEEEECCCCCEEEHHHHHHHHHHHCCCCCHHHC GGVIACNSKVTLEMAESVRPIFTEVIVAPDYEPAALELLQTKKKNLRILKVAEPPKGHEA CCEEEECCEEEEHHHHHHHHHHHHEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCHHHH IRQIDGGLLVQDTDLINAVGDDPDAWKLVAGEAADADTLKDLVFAWRAIRCVKSNAILLA HHHHCCCEEEECCHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEE HDQATVGIGMGQVNRVDSCHLAVERANTLADGADRATGAVAASDAFFPFADGAQVLIDAG ECCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCHHEEHHC VKAIVQPGGSIRDEEVIEAANKAGVTMYLTGTRHFFH CHHEECCCCCCCHHHHHHHHCCCCEEEEEECCCCCCC >Mature Secondary Structure MKAGTEVVSTGSTARKLAELGVKVTEVSDVTGFPECLDGRVKTLHPYIHAGILADMTNPE CCCCCCHHCCCHHHHHHHHCCCEEEEECCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCH HAKQLDGFGIKPFDLVVVNLYPFADTVRSGANEADTIEKIDIGGPSMVRGAAKNHATVAI HHHHCCCCCCCCEEEEEEEEECCHHHHHCCCCCCCCEEEEECCCHHHHHCCCCCCEEEEE VTDPADYALVAERVADGTGFSLDERKWLAAKAFAHTAAYDATINEWTAKHWPKPASLDTA EECCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHH EVDKDDQDTEIDSAKFPARFTRTWDRAHTLRYGENSHQQAALYIDPLNQTGFAHAEQLGG HCCCCCCCCCCCCCCCCHHHHHHHHHHHHEECCCCCCCEEEEEEECCCCCCCHHHHHHCC KPMSYNNYVDADAAWRTVWDMAPAIAVAVVKHNNPCGLAIGATVAEAHKKAHACDPMSAY CCCCCCCCCCCCHHHHHHHHHHHEEEEEEEEECCCCCEEEHHHHHHHHHHHCCCCCHHHC GGVIACNSKVTLEMAESVRPIFTEVIVAPDYEPAALELLQTKKKNLRILKVAEPPKGHEA CCEEEECCEEEEHHHHHHHHHHHHEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCHHHH IRQIDGGLLVQDTDLINAVGDDPDAWKLVAGEAADADTLKDLVFAWRAIRCVKSNAILLA HHHHCCCEEEECCHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEE HDQATVGIGMGQVNRVDSCHLAVERANTLADGADRATGAVAASDAFFPFADGAQVLIDAG ECCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCHHEEHHC VKAIVQPGGSIRDEEVIEAANKAGVTMYLTGTRHFFH CHHEECCCCCCCHHHHHHHHCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA