| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692010
Identifier: 213692010
GI number: 213692010
Start: 1315269
End: 1317551
Strand: Reverse
Name: 213692010
Synonym: Blon_1128
Alternate gene names: NA
Gene position: 1317551-1315269 (Counterclockwise)
Preceding gene: 213692011
Following gene: 213692009
Centisome position: 46.51
GC content: 60.84
Gene sequence:
>2283_bases ATGACCGACATCTACGGATACGCGGCAGCCGCACCCCTGTACCGTGCGGCTGGATGGATGCAGGTCATCCCCCTGCCGGA AGGCCACAAGACCCCGCCGCCCAGCGGTTTCACGGGACGCAGCCGCAAACCCGTCACCGACGAACAAGTACAGGTCTGGT CTCAGGCGACCCCGAACGCGAACACGGGCATCGTCATACCAGAAGGCGTGCTCGTGTTGGACATCGACGCGGAGCAGGGC CATCGGGTCAAGGCGGACGGGGCGAAAGGCATCAGCGAGCTCTCGCAGGAACTGGGCGCATTGCCGGCCACGTGGAGCAG CACGGCGCACGGCATCGACTCGCCGGCACGCCACCTGTTCTACAAGGTGCCCGAAGGGCTCGCGTGGAAGGGCGGTGCAA TCGAGGGCGTCGACATCCTGCAGCCCGGCCACAGGTACAGCGTGGTCTGGCCGTCGATTCACCCTTCCGGCGAGATGTAC TGCTGGTACACTCCCAGCGGCTCGACCACCAGCCAGATCCCCCATATCAGCGATCTGGCTACCCTGCCGTGGAAGTGGGT GGACTACCTGCGCAAACCGGAGCATACGACGCCGAAACCAGCCTTCAATACCCTGATTTCACACGAAACCGGCACATACG ACACCCGTATGTGCAAAGCCATCAACACATTTTTGAACAAAACGCTGTCAAACCCGGCCAGCAAAGGCAGTCGCCACGAC ACCACGTTGCAGGCCGTATGGGCATTGGTGAACTTCGCGCAGGAAGGCCATCGCGGCGCGCTCGACGCCATCAACCAGCT CAAACCACGGTTCATCGCCGAGATAGCACCCGACCGTCCGGGCAAGGAGCGTGAGGCGGCACGCGAATGGGCGGCGATAC TCTCCGGCGCGATGGAGAAGGTCAACGGCATACAGTCGCACGCGGACCCGTGCGAACAGTCGAAAATCGAACGCATGCTG CCCGGCGAGTTCAACGAACTCACCCAAAACACGATTGCGAATCAAATGGGGGAAAGTCACCCACAGCAGGTTCAAAACGT TGGAACGACGCCGGTTCAAACCGGTTCAACCACCGCATCTCAGGTTCAAAACGGTTCAACGGAAAGTTACGAGGCAAATA AAACCTCCTCCAGTTGGCGGTTCGAGGACCTCACCCAGTTGGCGTCCGGCGTCGAACTGCCGCCAACGCCAACCGTGTTC CAACGCGAGGACGGCCAAGGACTCTTCTACCGTGGCGCGGTCAACGACCTGCACGGCGAACCCGGCTGCGGCAAAAGCAT GATCGCCCAGATAGCCGCCGCACAGGAACTCAAGAGTAGCCATGATGTCATCTACATCGATTATGAGGACAGCGCCAGAA ACGTGGTCAAACGCCTCCTGCTGCTCGGCGTGACCGGCGAGCAGATAGTGGCTCACTTCCACTACGTGCGCCCCAGCGCC AAGCCTAGCAGCCCCACCAGCCTCGACGGCTGGCGCGAGACCCTCGGCTACGCCGACACCGCCACGCTCACCGTCATCGA CGGCGTCACCAGCTGCCTCGCCTATGCAGGACTCGACTCGAATTCCGGTGACGACATCGCCGCCTGGTACAACACCATGC CCCGACTCATATTGGCCTGCGGACCCGCCGTCGTATTGATAGACCACGTCGTCAAGTCAAAGGACAACCGCGGCCGGTAC GCCGGAGGCAGCATGCAGAAACTCGCATTGATCGACGGCATCAGCTACTCGGCGAACATGACCAAGCCAGTCGGCAAAGG CGTACGCGGCACCATCGTCATCAAAAGCGGCAAGGACCGCATCAGTGAAATCGAGGAGCACTGCGCCGTCAGTTGGGATT CGAACGGCTCGCACCTGCGCGAAGCAGCACGCATCGAAATCAACAGCACGAACCCGAAACTCATGCACGTCACCATCGCA CGACCCAACATGATGCCCAGCGAGGACCGTCAGACGAAACGCGACGACTTCCGACCCACCGGACTCATGGAGAAAATCAG TCAGCTCGTCGAGAACGCCATAGAGGAACCAAGCCAATCGGAACTGTTCGACGCCTTGAAATCGGATGGCTCCGGCGCCA AGACCGCGATTATGTCGAAAGCCATCAGACTGCTGCTGGAGGAGGGGTATGTGACGAACCGCGCCAGCAGACACAACCGC GCATGCTACCGGTCGGCACGCCCCTACCGGCAGATAGACGACCCAAAGTCGGATTCTTTCGTGGACCGTATGAGCAGGGA GGAGGTGAGCGAATTGGACGATGGGAACCACCTCGACATCTAG
Upstream 100 bases:
>100_bases TCCAGTCCCGACCGCCGTAGCCGTATCCAAGCGGCCGGCACGCATGCAAAGGCGTGCACGGCACCACACATATTCACATC ACGTCAAAGGAGTTTCAAGG
Downstream 100 bases:
>100_bases ATTTTCCGTTTTTCCCGAACGTTTCCCAGCTCTTCCCAAAAAAACTGAGCCACCGAGACTAGCTCTTCCCCACACTCCCC GACCACACTACGTGTGTGGT
Product: pancreatic ribonuclease
Products: NA
Alternate protein names: Phage/Plasmid Primase; Pancreatic Ribonuclease
Number of amino acids: Translated: 760; Mature: 759
Protein sequence:
>760_residues MTDIYGYAAAAPLYRAAGWMQVIPLPEGHKTPPPSGFTGRSRKPVTDEQVQVWSQATPNANTGIVIPEGVLVLDIDAEQG HRVKADGAKGISELSQELGALPATWSSTAHGIDSPARHLFYKVPEGLAWKGGAIEGVDILQPGHRYSVVWPSIHPSGEMY CWYTPSGSTTSQIPHISDLATLPWKWVDYLRKPEHTTPKPAFNTLISHETGTYDTRMCKAINTFLNKTLSNPASKGSRHD TTLQAVWALVNFAQEGHRGALDAINQLKPRFIAEIAPDRPGKEREAAREWAAILSGAMEKVNGIQSHADPCEQSKIERML PGEFNELTQNTIANQMGESHPQQVQNVGTTPVQTGSTTASQVQNGSTESYEANKTSSSWRFEDLTQLASGVELPPTPTVF QREDGQGLFYRGAVNDLHGEPGCGKSMIAQIAAAQELKSSHDVIYIDYEDSARNVVKRLLLLGVTGEQIVAHFHYVRPSA KPSSPTSLDGWRETLGYADTATLTVIDGVTSCLAYAGLDSNSGDDIAAWYNTMPRLILACGPAVVLIDHVVKSKDNRGRY AGGSMQKLALIDGISYSANMTKPVGKGVRGTIVIKSGKDRISEIEEHCAVSWDSNGSHLREAARIEINSTNPKLMHVTIA RPNMMPSEDRQTKRDDFRPTGLMEKISQLVENAIEEPSQSELFDALKSDGSGAKTAIMSKAIRLLLEEGYVTNRASRHNR ACYRSARPYRQIDDPKSDSFVDRMSREEVSELDDGNHLDI
Sequences:
>Translated_760_residues MTDIYGYAAAAPLYRAAGWMQVIPLPEGHKTPPPSGFTGRSRKPVTDEQVQVWSQATPNANTGIVIPEGVLVLDIDAEQG HRVKADGAKGISELSQELGALPATWSSTAHGIDSPARHLFYKVPEGLAWKGGAIEGVDILQPGHRYSVVWPSIHPSGEMY CWYTPSGSTTSQIPHISDLATLPWKWVDYLRKPEHTTPKPAFNTLISHETGTYDTRMCKAINTFLNKTLSNPASKGSRHD TTLQAVWALVNFAQEGHRGALDAINQLKPRFIAEIAPDRPGKEREAAREWAAILSGAMEKVNGIQSHADPCEQSKIERML PGEFNELTQNTIANQMGESHPQQVQNVGTTPVQTGSTTASQVQNGSTESYEANKTSSSWRFEDLTQLASGVELPPTPTVF QREDGQGLFYRGAVNDLHGEPGCGKSMIAQIAAAQELKSSHDVIYIDYEDSARNVVKRLLLLGVTGEQIVAHFHYVRPSA KPSSPTSLDGWRETLGYADTATLTVIDGVTSCLAYAGLDSNSGDDIAAWYNTMPRLILACGPAVVLIDHVVKSKDNRGRY AGGSMQKLALIDGISYSANMTKPVGKGVRGTIVIKSGKDRISEIEEHCAVSWDSNGSHLREAARIEINSTNPKLMHVTIA RPNMMPSEDRQTKRDDFRPTGLMEKISQLVENAIEEPSQSELFDALKSDGSGAKTAIMSKAIRLLLEEGYVTNRASRHNR ACYRSARPYRQIDDPKSDSFVDRMSREEVSELDDGNHLDI >Mature_759_residues TDIYGYAAAAPLYRAAGWMQVIPLPEGHKTPPPSGFTGRSRKPVTDEQVQVWSQATPNANTGIVIPEGVLVLDIDAEQGH RVKADGAKGISELSQELGALPATWSSTAHGIDSPARHLFYKVPEGLAWKGGAIEGVDILQPGHRYSVVWPSIHPSGEMYC WYTPSGSTTSQIPHISDLATLPWKWVDYLRKPEHTTPKPAFNTLISHETGTYDTRMCKAINTFLNKTLSNPASKGSRHDT TLQAVWALVNFAQEGHRGALDAINQLKPRFIAEIAPDRPGKEREAAREWAAILSGAMEKVNGIQSHADPCEQSKIERMLP GEFNELTQNTIANQMGESHPQQVQNVGTTPVQTGSTTASQVQNGSTESYEANKTSSSWRFEDLTQLASGVELPPTPTVFQ REDGQGLFYRGAVNDLHGEPGCGKSMIAQIAAAQELKSSHDVIYIDYEDSARNVVKRLLLLGVTGEQIVAHFHYVRPSAK PSSPTSLDGWRETLGYADTATLTVIDGVTSCLAYAGLDSNSGDDIAAWYNTMPRLILACGPAVVLIDHVVKSKDNRGRYA GGSMQKLALIDGISYSANMTKPVGKGVRGTIVIKSGKDRISEIEEHCAVSWDSNGSHLREAARIEINSTNPKLMHVTIAR PNMMPSEDRQTKRDDFRPTGLMEKISQLVENAIEEPSQSELFDALKSDGSGAKTAIMSKAIRLLLEEGYVTNRASRHNRA CYRSARPYRQIDDPKSDSFVDRMSREEVSELDDGNHLDI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83162; Mature: 83031
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: PS00127 RNASE_PANCREATIC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDIYGYAAAAPLYRAAGWMQVIPLPEGHKTPPPSGFTGRSRKPVTDEQVQVWSQATPNA CCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCC NTGIVIPEGVLVLDIDAEQGHRVKADGAKGISELSQELGALPATWSSTAHGIDSPARHLF CCCEEECCCEEEEEECCCCCCEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH YKVPEGLAWKGGAIEGVDILQPGHRYSVVWPSIHPSGEMYCWYTPSGSTTSQIPHISDLA HCCCCCCEECCCCCCCHHHCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCHHHHH TLPWKWVDYLRKPEHTTPKPAFNTLISHETGTYDTRMCKAINTFLNKTLSNPASKGSRHD HCCHHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCH TTLQAVWALVNFAQEGHRGALDAINQLKPRFIAEIAPDRPGKEREAAREWAAILSGAMEK HHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH VNGIQSHADPCEQSKIERMLPGEFNELTQNTIANQMGESHPQQVQNVGTTPVQTGSTTAS HHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCHHH QVQNGSTESYEANKTSSSWRFEDLTQLASGVELPPTPTVFQREDGQGLFYRGAVNDLHGE HHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEECCCCCEEEEECCCHHCCCC PGCGKSMIAQIAAAQELKSSHDVIYIDYEDSARNVVKRLLLLGVTGEQIVAHFHYVRPSA CCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC KPSSPTSLDGWRETLGYADTATLTVIDGVTSCLAYAGLDSNSGDDIAAWYNTMPRLILAC CCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH GPAVVLIDHVVKSKDNRGRYAGGSMQKLALIDGISYSANMTKPVGKGVRGTIVIKSGKDR CCHHHHHHHHHHCCCCCCCCCCCCCCEEHEECCCCCCCCCCCHHCCCCEEEEEEECCHHH ISEIEEHCAVSWDSNGSHLREAARIEINSTNPKLMHVTIARPNMMPSEDRQTKRDDFRPT HHHHHHHHEECCCCCCHHHHHHHEEEEECCCCEEEEEEEECCCCCCCCHHHHHHHCCCCC GLMEKISQLVENAIEEPSQSELFDALKSDGSGAKTAIMSKAIRLLLEEGYVTNRASRHNR HHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHH ACYRSARPYRQIDDPKSDSFVDRMSREEVSELDDGNHLDI HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TDIYGYAAAAPLYRAAGWMQVIPLPEGHKTPPPSGFTGRSRKPVTDEQVQVWSQATPNA CCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCC NTGIVIPEGVLVLDIDAEQGHRVKADGAKGISELSQELGALPATWSSTAHGIDSPARHLF CCCEEECCCEEEEEECCCCCCEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH YKVPEGLAWKGGAIEGVDILQPGHRYSVVWPSIHPSGEMYCWYTPSGSTTSQIPHISDLA HCCCCCCEECCCCCCCHHHCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCHHHHH TLPWKWVDYLRKPEHTTPKPAFNTLISHETGTYDTRMCKAINTFLNKTLSNPASKGSRHD HCCHHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCH TTLQAVWALVNFAQEGHRGALDAINQLKPRFIAEIAPDRPGKEREAAREWAAILSGAMEK HHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH VNGIQSHADPCEQSKIERMLPGEFNELTQNTIANQMGESHPQQVQNVGTTPVQTGSTTAS HHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCHHH QVQNGSTESYEANKTSSSWRFEDLTQLASGVELPPTPTVFQREDGQGLFYRGAVNDLHGE HHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEECCCCCEEEEECCCHHCCCC PGCGKSMIAQIAAAQELKSSHDVIYIDYEDSARNVVKRLLLLGVTGEQIVAHFHYVRPSA CCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC KPSSPTSLDGWRETLGYADTATLTVIDGVTSCLAYAGLDSNSGDDIAAWYNTMPRLILAC CCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH GPAVVLIDHVVKSKDNRGRYAGGSMQKLALIDGISYSANMTKPVGKGVRGTIVIKSGKDR CCHHHHHHHHHHCCCCCCCCCCCCCCEEHEECCCCCCCCCCCHHCCCCEEEEEEECCHHH ISEIEEHCAVSWDSNGSHLREAARIEINSTNPKLMHVTIARPNMMPSEDRQTKRDDFRPT HHHHHHHHEECCCCCCHHHHHHHEEEEECCCCEEEEEEEECCCCCCCCHHHHHHHCCCCC GLMEKISQLVENAIEEPSQSELFDALKSDGSGAKTAIMSKAIRLLLEEGYVTNRASRHNR HHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHH ACYRSARPYRQIDDPKSDSFVDRMSREEVSELDDGNHLDI HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA