| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
Click here to switch to the map view.
The map label for this gene is 213691991
Identifier: 213691991
GI number: 213691991
Start: 1302183
End: 1302677
Strand: Reverse
Name: 213691991
Synonym: Blon_1109
Alternate gene names: NA
Gene position: 1302677-1302183 (Counterclockwise)
Preceding gene: 213691992
Following gene: 213691990
Centisome position: 45.99
GC content: 61.82
Gene sequence:
>495_bases ATGGCTCTGGAAGTGAAGCGCAAGCGCGTGGACGTCGATCTGATCTTGGATCAGGAGAAGGCCGAACAGGTCGCCGCATT GGGGGCCGGCCTGGAGCGCGCCATGGCGCAGCATGTGACCGAAGGCGGCAACGCCGCCGTCAAACGCATCGCCAAGCAGA TCGACAAGCTGCGCGACGAGGTGAAGGACGACACCATCCGCATCACCTTGGAGGCGCTGCCTCTTTCCCAGTGGCGTCAG GTGCTCGAGGCGAACATCGTCACCGAGAACGGCCTGCCGAAGCAGCGCATCGAGGACATCTGCGCCGACGCCATCAAACT CATGGCCCGGAAGACCGTGCCGGAAACCCCGGTGGAGGAGCTGGCGAACGTCATGACCGAACTGTCCGACGGCCAGATTT CCCCGATCTGGTACGCGATCCGTGATCTGAATGCGAAGCTCATCGACCCAAAAGACGCACTCGAATCAGCCTCGCGGATA ATCCGCAGACAGTAA
Upstream 100 bases:
>100_bases AAATCTTCCATGCGGGGATTCTTACCTTTCTGGCCCCGCACGAACATTCTCTCTTCTCATTCCCAGAAAGGCGATCTGAA ACTTTTAGAAAGGGATAATC
Downstream 100 bases:
>100_bases GGGAACTGCGAATCTGCCAGAAGCTCGGCATCAGCTACAAACGCTGGCTCGGCTGGGAACCATCGTATCGGGTGGAAAGG GACGAGCATAGGCGCATCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MALEVKRKRVDVDLILDQEKAEQVAALGAGLERAMAQHVTEGGNAAVKRIAKQIDKLRDEVKDDTIRITLEALPLSQWRQ VLEANIVTENGLPKQRIEDICADAIKLMARKTVPETPVEELANVMTELSDGQISPIWYAIRDLNAKLIDPKDALESASRI IRRQ
Sequences:
>Translated_164_residues MALEVKRKRVDVDLILDQEKAEQVAALGAGLERAMAQHVTEGGNAAVKRIAKQIDKLRDEVKDDTIRITLEALPLSQWRQ VLEANIVTENGLPKQRIEDICADAIKLMARKTVPETPVEELANVMTELSDGQISPIWYAIRDLNAKLIDPKDALESASRI IRRQ >Mature_163_residues ALEVKRKRVDVDLILDQEKAEQVAALGAGLERAMAQHVTEGGNAAVKRIAKQIDKLRDEVKDDTIRITLEALPLSQWRQV LEANIVTENGLPKQRIEDICADAIKLMARKTVPETPVEELANVMTELSDGQISPIWYAIRDLNAKLIDPKDALESASRII RRQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18344; Mature: 18213
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALEVKRKRVDVDLILDQEKAEQVAALGAGLERAMAQHVTEGGNAAVKRIAKQIDKLRDE CCCCHHHHHCCHHHEECHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH VKDDTIRITLEALPLSQWRQVLEANIVTENGLPKQRIEDICADAIKLMARKTVPETPVEE HCCCCEEEEHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHH LANVMTELSDGQISPIWYAIRDLNAKLIDPKDALESASRIIRRQ HHHHHHHHCCCCCCHHHHHHHHCCCCEECHHHHHHHHHHHHHCC >Mature Secondary Structure ALEVKRKRVDVDLILDQEKAEQVAALGAGLERAMAQHVTEGGNAAVKRIAKQIDKLRDE CCCHHHHHCCHHHEECHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH VKDDTIRITLEALPLSQWRQVLEANIVTENGLPKQRIEDICADAIKLMARKTVPETPVEE HCCCCEEEEHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHH LANVMTELSDGQISPIWYAIRDLNAKLIDPKDALESASRIIRRQ HHHHHHHHCCCCCCHHHHHHHHCCCCEECHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA