| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691986
Identifier: 213691986
GI number: 213691986
Start: 1295419
End: 1296639
Strand: Reverse
Name: 213691986
Synonym: Blon_1104
Alternate gene names: NA
Gene position: 1296639-1295419 (Counterclockwise)
Preceding gene: 213691987
Following gene: 213691985
Centisome position: 45.77
GC content: 65.27
Gene sequence:
>1221_bases ATGAGCTGGCGCGCCTGCCTGTGCGACACGATGACCGGGCTGCTCGGCCAGCAGATCGACATCCCCGGCTTCACATGGTC GATGACCGTCAGCAACTCCAGTTTTTCCACGACGAGGGACAAGGGCGTGGGCGCGGACGAGGTGTCCGGGCTCCAGTTGC CCTGGTCGCAGATACCGGGATCCACGCCGACCGCGCGGGCGGATGCGCTGATGTGCGGCAAACGCGGCCTCGTGCTCTTC TGGCACGGCGTCCTGGACGGCGACGCCTCGTTGGGCACGCCGATCATCGGTGGGGTGTTCGGCGTCAGGTCGAGCAGTCA GCAGGATGTGAGCATCCCGCTGGACAGCATCCCGACCGTGCTGGGCGACAGGATTCTCGCGCACGAGGACGGGTTCGGCA CCAACGCGGCGCACACGGCCCCCGGCGGGTATGCATGGCAGGGACTGTCCCTGCGCGCGATCGCCTGCGAGGTGATTCGT CAATGCACCAGCGCCAAGCCCGGCGGCACGCTCCCCATCGACCTGCCATGGCTCGGCGAGCAAGGCGGCCACCAGCGTAC GGACTACCAGGACTGGGACGTACAGAACCAGTCCTGCAAGCAGATACTCACGAAGCTCACGAACGTGACCAGCGGGCCAG ACATGCAGTTCAGGCCGTATCTTTCGGATTCGCAGCACGTGCGATACCGGTTCGAGGCCGGGAGTGACGGCGACGTGTAT CTCGGCCAGAAGACCGTGCACTCATTGGACTACCATCCATTGGGCGGCACCCTAGAAGATCTGAAGGTGGACCGCATGGC ACCGGCACAGCGGTTCTACGCGACCGGCGCCGGGAGCGATAAGGCCACGATCTGCTGTCTGGCCGAGGACCTGACCCTGT GCCGGCGGTCCGACCCGTGGCCGTTGCGCGAAGGCGTGTACAGCGATCCCGACGCGAAGAGCTGGGACGTCCTGAAATCG CACGCGCAGGCCAAGCTCGCCGCGAATTCCAAACCTCTCATGCAACTATCCGGCACGATCGACGCGAACGACGTGGACGC TTCCGGCATGCCCCTGCACGCACCCGGCACATTCTGGCCCGGCGAGATCTTCGAGGTCTCCATAACCGGGTTTCCCGACC TGCCCGACGGGATCTACCGTCAGCGGCTCATGAAGATGAGCGGCGACCAGACCGGCAAGGTCACGCTCCTGTTCGACATC TGCGAAGACCCCTGCACCTGA
Upstream 100 bases:
>100_bases ACGAACAGGGCCCGGGCTATGTGACGCATTACGGCGTGAAGGACAATGGCGACACGTATGTGGGCCGCGTGCTCGTCGTC AAGGACGAGGGGGTGGCGAG
Downstream 100 bases:
>100_bases CGCAGGGATCCCATGTTCTTTTTTGGAGGTTATCTCATGGCATTACATGGCGAGATCAACCCGTCCGACCTCGATCTGCT GCTCGGCACGGGCCTCAACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 406; Mature: 405
Protein sequence:
>406_residues MSWRACLCDTMTGLLGQQIDIPGFTWSMTVSNSSFSTTRDKGVGADEVSGLQLPWSQIPGSTPTARADALMCGKRGLVLF WHGVLDGDASLGTPIIGGVFGVRSSSQQDVSIPLDSIPTVLGDRILAHEDGFGTNAAHTAPGGYAWQGLSLRAIACEVIR QCTSAKPGGTLPIDLPWLGEQGGHQRTDYQDWDVQNQSCKQILTKLTNVTSGPDMQFRPYLSDSQHVRYRFEAGSDGDVY LGQKTVHSLDYHPLGGTLEDLKVDRMAPAQRFYATGAGSDKATICCLAEDLTLCRRSDPWPLREGVYSDPDAKSWDVLKS HAQAKLAANSKPLMQLSGTIDANDVDASGMPLHAPGTFWPGEIFEVSITGFPDLPDGIYRQRLMKMSGDQTGKVTLLFDI CEDPCT
Sequences:
>Translated_406_residues MSWRACLCDTMTGLLGQQIDIPGFTWSMTVSNSSFSTTRDKGVGADEVSGLQLPWSQIPGSTPTARADALMCGKRGLVLF WHGVLDGDASLGTPIIGGVFGVRSSSQQDVSIPLDSIPTVLGDRILAHEDGFGTNAAHTAPGGYAWQGLSLRAIACEVIR QCTSAKPGGTLPIDLPWLGEQGGHQRTDYQDWDVQNQSCKQILTKLTNVTSGPDMQFRPYLSDSQHVRYRFEAGSDGDVY LGQKTVHSLDYHPLGGTLEDLKVDRMAPAQRFYATGAGSDKATICCLAEDLTLCRRSDPWPLREGVYSDPDAKSWDVLKS HAQAKLAANSKPLMQLSGTIDANDVDASGMPLHAPGTFWPGEIFEVSITGFPDLPDGIYRQRLMKMSGDQTGKVTLLFDI CEDPCT >Mature_405_residues SWRACLCDTMTGLLGQQIDIPGFTWSMTVSNSSFSTTRDKGVGADEVSGLQLPWSQIPGSTPTARADALMCGKRGLVLFW HGVLDGDASLGTPIIGGVFGVRSSSQQDVSIPLDSIPTVLGDRILAHEDGFGTNAAHTAPGGYAWQGLSLRAIACEVIRQ CTSAKPGGTLPIDLPWLGEQGGHQRTDYQDWDVQNQSCKQILTKLTNVTSGPDMQFRPYLSDSQHVRYRFEAGSDGDVYL GQKTVHSLDYHPLGGTLEDLKVDRMAPAQRFYATGAGSDKATICCLAEDLTLCRRSDPWPLREGVYSDPDAKSWDVLKSH AQAKLAANSKPLMQLSGTIDANDVDASGMPLHAPGTFWPGEIFEVSITGFPDLPDGIYRQRLMKMSGDQTGKVTLLFDIC EDPCT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43905; Mature: 43774
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWRACLCDTMTGLLGQQIDIPGFTWSMTVSNSSFSTTRDKGVGADEVSGLQLPWSQIPG CCCHHHHHHHHHHHHCCEECCCCEEEEEEECCCCCCCCCCCCCCHHHCCCCCCCHHHCCC STPTARADALMCGKRGLVLFWHGVLDGDASLGTPIIGGVFGVRSSSQQDVSIPLDSIPTV CCCCCHHHHHHCCCCCEEEEEEEEECCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHH LGDRILAHEDGFGTNAAHTAPGGYAWQGLSLRAIACEVIRQCTSAKPGGTLPIDLPWLGE HCCEEEEECCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCCEEECCCCCC QGGHQRTDYQDWDVQNQSCKQILTKLTNVTSGPDMQFRPYLSDSQHVRYRFEAGSDGDVY CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEECCCCCCCCEEEEEEECCCCCCEE LGQKTVHSLDYHPLGGTLEDLKVDRMAPAQRFYATGAGSDKATICCLAEDLTLCRRSDPW ECHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHEECCCCCCCEEEEEEEHHHHHHHCCCCC PLREGVYSDPDAKSWDVLKSHAQAKLAANSKPLMQLSGTIDANDVDASGMPLHAPGTFWP CHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCEECCCCCCCC GEIFEVSITGFPDLPDGIYRQRLMKMSGDQTGKVTLLFDICEDPCT CCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCCC >Mature Secondary Structure SWRACLCDTMTGLLGQQIDIPGFTWSMTVSNSSFSTTRDKGVGADEVSGLQLPWSQIPG CCHHHHHHHHHHHHCCEECCCCEEEEEEECCCCCCCCCCCCCCHHHCCCCCCCHHHCCC STPTARADALMCGKRGLVLFWHGVLDGDASLGTPIIGGVFGVRSSSQQDVSIPLDSIPTV CCCCCHHHHHHCCCCCEEEEEEEEECCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHH LGDRILAHEDGFGTNAAHTAPGGYAWQGLSLRAIACEVIRQCTSAKPGGTLPIDLPWLGE HCCEEEEECCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCCEEECCCCCC QGGHQRTDYQDWDVQNQSCKQILTKLTNVTSGPDMQFRPYLSDSQHVRYRFEAGSDGDVY CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEECCCCCCCCEEEEEEECCCCCCEE LGQKTVHSLDYHPLGGTLEDLKVDRMAPAQRFYATGAGSDKATICCLAEDLTLCRRSDPW ECHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHEECCCCCCCEEEEEEEHHHHHHHCCCCC PLREGVYSDPDAKSWDVLKSHAQAKLAANSKPLMQLSGTIDANDVDASGMPLHAPGTFWP CHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCEECCCCCCCC GEIFEVSITGFPDLPDGIYRQRLMKMSGDQTGKVTLLFDICEDPCT CCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA