| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is tkt [H]
Identifier: 213691978
GI number: 213691978
Start: 1283617
End: 1285725
Strand: Reverse
Name: tkt [H]
Synonym: Blon_1096
Alternate gene names: 213691978
Gene position: 1285725-1283617 (Counterclockwise)
Preceding gene: 213691981
Following gene: 213691977
Centisome position: 45.39
GC content: 66.95
Gene sequence:
>2109_bases ATGACCGAATTCAAGGAGACCGAGCTCGACGAGCGCGCCATCAAGATGGCGAAGGTCCTTTCGGCTGACGCGGTTGAGAA GGCGGGCTCCGGCCACCCCGGCTCCCCCGTCTCCCTGGCGCCCGTCGCCTACACGCTGTACCAGCACTTCATCAAGCACG ATCCGAATGATCCCAACTGGGAAGGCCGCGATCGCTTCATCCTTTCCGGTGGCCACGCCTCCCTCACCCAGTACGTCCAG CTGTACTTCTCCGGTTACGGCGTGACCCTGGACGACCTCAAGAGCTTCCGTGGCAGCGCGGCCACCCGCACCCCGGGCCA CCCGGAGTACGGCCTGACCCCGGGCATCGAAATGACCACCGGTCCTCTGGGTCAGGGTCTCGCCTCCGCCATCGGCTTCG CCTACGGCGAGCGTTTCCAGCGCGGTCTGCTTGACCCGGAGACCCCGAAGGAAGATTCCCCGTTCTACCACAAGATCTGG GCCATCTGCGGCGAAGGCGACATCGAGGAGGGCATCTCCGGCGAGGCCGCTTCCCTGGCCGCCAACCAGAAGCTCGGCAA CCTGACCGTGATCTTCGACGCCAACCGCATCCAAATCGAAGGCGACACCAACCTGGTGCTGGCCGAGGACGTGCTCAAGC GCTTCCAGGCATACGGCTGGTACACCGACGAGTTCAGCTTCATCCAGCCCGACGGCTCCTACAAGGAGGACATCGAAGGC CTGGCCGACGTCATCGCCAAGGCCGAGAAGGCCGCTCCGGACCAGCCGAAGCTCATCAAGGTCCACTCCCTGATCGCCTG GCCGACCCCGGGCAAGACCAACGACCCGTCCTCCCACGGCTCCAAGCTGGGCGCCGAGGCCGTCGCCGGCCTCAAGAAGC TCCTCGGCTACGATCCGGAGGAGTCCTTCCACGTCGACGAAGAAGCCCTGGCCCACGCCCGCAAGGTCGCCGATCGCGGC CTGGAAGCCCACAAGGCCTGGGACGAGAAGTTCGACGCCTGGCGCAAGGCCAACCCGGACAAGGCCGCCCTGTACGACCG CCTGAAGGCCGGCGAGCTGCCGGAAGGCTTCGATAAGGCCCTGGACGACCTTGAGGCCACCTTCGAAGTCGGCAAGAACG TCGCCACCCGCGGCGCCTCCGGCTCCGTGCTCAACGCCATCGCCGCCGTCATGCCGGAACTCTGGGGCGGCTCCGCCGAC CTCGGCGGCTCCAACAAGACCGACCTCAAGGGCGCCGCCACCTTCGCCCCGGCCGAGTGCGCCACCGTTCAGTGGCCGAA TTGCAACGAGTTCGGCCGCCAGCTTCACTTCGGCGTGCGTGAGTTCGCCATGGGCTGCATCACCAACGGCATCCTGCTCG GTTCGCACACCCGTCCGTTCGGCGGTACCTTCTTCATGTTCTCCGACTACGAGCGTTCCGCCGTCCGTCTGGCCGCCCTC ATGCAGATCCCGAACCTGTACATCTGGTCCCACGACTCCGTCGCCGTCGGCGAGGACGGCCCGACCCATCAGCCGGTCGA GCACCTGGCCTCCTTCCGCGCGATTCCTCAGCTTGAGGTCATCCGCCCGGCCGACGCCTTCGAGACCGCCGAGGCCTACC GCTACTTCTTCGAGAAGAAGAACACGCTGCCCGGCGCCATGATCCTGACCCGTCAGGGCGTCCCGGTGCTCGCCGAGACC GCCGCCAAGGCCAAGGAAGGCGTTCGCAAGGGCGCCTACGTGCTCGTGGACACCGAGGGCACCCCGGACGTCATCCTCAT GGCTTCCGGCTCCGAGGTCCAGTGGGCCGTGGCCGCCGCCAAGACCCTGGCCGGCGAGGGCGTCAAGGCTCGCGTCGTGT CCGTGCCGTCCCTCGAATGGTTCGAGGAGCAGGACGCCGAGTACAAGGAGGCCGTGCTGCCGGCCGCCGTCAAGGCCCGC GTCTCCGTCGAGGCCGGCGTCGCCATGCCGTGGTACAAGTACCTCGGCTCCTACGGCAAGCCCGTCTCCATCGAGCAGTT CGGCCTGCAGGGCGATGGCGCTCAGAACATGATCGACCTTGGCATCACCGCCGAGCACGTCGTGGAAGCCGCCAAGGCCT CCATCGCCGAAGCCGAAGCCGCCAAGTGA
Upstream 100 bases:
>100_bases CGTCGCAAACCGACGGTAGCATGGTAATCGCAATGTGAGGGCGTCAAGCGCCCGGCACAAGCCGGATACGCGGCCCGACC AATTGGAAGGAAAGTAATCC
Downstream 100 bases:
>100_bases TCATGCGTCTCCCGCTGGCGAGTTGAGTCGTCAGTCTCCACAGCGGGAGACGATCGTATGACGGATGGGCCAAGACCGCC GGCGTGGCCGGTCATCGAAG
Product: transketolase
Products: NA
Alternate protein names: TK [H]
Number of amino acids: Translated: 702; Mature: 701
Protein sequence:
>702_residues MTEFKETELDERAIKMAKVLSADAVEKAGSGHPGSPVSLAPVAYTLYQHFIKHDPNDPNWEGRDRFILSGGHASLTQYVQ LYFSGYGVTLDDLKSFRGSAATRTPGHPEYGLTPGIEMTTGPLGQGLASAIGFAYGERFQRGLLDPETPKEDSPFYHKIW AICGEGDIEEGISGEAASLAANQKLGNLTVIFDANRIQIEGDTNLVLAEDVLKRFQAYGWYTDEFSFIQPDGSYKEDIEG LADVIAKAEKAAPDQPKLIKVHSLIAWPTPGKTNDPSSHGSKLGAEAVAGLKKLLGYDPEESFHVDEEALAHARKVADRG LEAHKAWDEKFDAWRKANPDKAALYDRLKAGELPEGFDKALDDLEATFEVGKNVATRGASGSVLNAIAAVMPELWGGSAD LGGSNKTDLKGAATFAPAECATVQWPNCNEFGRQLHFGVREFAMGCITNGILLGSHTRPFGGTFFMFSDYERSAVRLAAL MQIPNLYIWSHDSVAVGEDGPTHQPVEHLASFRAIPQLEVIRPADAFETAEAYRYFFEKKNTLPGAMILTRQGVPVLAET AAKAKEGVRKGAYVLVDTEGTPDVILMASGSEVQWAVAAAKTLAGEGVKARVVSVPSLEWFEEQDAEYKEAVLPAAVKAR VSVEAGVAMPWYKYLGSYGKPVSIEQFGLQGDGAQNMIDLGITAEHVVEAAKASIAEAEAAK
Sequences:
>Translated_702_residues MTEFKETELDERAIKMAKVLSADAVEKAGSGHPGSPVSLAPVAYTLYQHFIKHDPNDPNWEGRDRFILSGGHASLTQYVQ LYFSGYGVTLDDLKSFRGSAATRTPGHPEYGLTPGIEMTTGPLGQGLASAIGFAYGERFQRGLLDPETPKEDSPFYHKIW AICGEGDIEEGISGEAASLAANQKLGNLTVIFDANRIQIEGDTNLVLAEDVLKRFQAYGWYTDEFSFIQPDGSYKEDIEG LADVIAKAEKAAPDQPKLIKVHSLIAWPTPGKTNDPSSHGSKLGAEAVAGLKKLLGYDPEESFHVDEEALAHARKVADRG LEAHKAWDEKFDAWRKANPDKAALYDRLKAGELPEGFDKALDDLEATFEVGKNVATRGASGSVLNAIAAVMPELWGGSAD LGGSNKTDLKGAATFAPAECATVQWPNCNEFGRQLHFGVREFAMGCITNGILLGSHTRPFGGTFFMFSDYERSAVRLAAL MQIPNLYIWSHDSVAVGEDGPTHQPVEHLASFRAIPQLEVIRPADAFETAEAYRYFFEKKNTLPGAMILTRQGVPVLAET AAKAKEGVRKGAYVLVDTEGTPDVILMASGSEVQWAVAAAKTLAGEGVKARVVSVPSLEWFEEQDAEYKEAVLPAAVKAR VSVEAGVAMPWYKYLGSYGKPVSIEQFGLQGDGAQNMIDLGITAEHVVEAAKASIAEAEAAK >Mature_701_residues TEFKETELDERAIKMAKVLSADAVEKAGSGHPGSPVSLAPVAYTLYQHFIKHDPNDPNWEGRDRFILSGGHASLTQYVQL YFSGYGVTLDDLKSFRGSAATRTPGHPEYGLTPGIEMTTGPLGQGLASAIGFAYGERFQRGLLDPETPKEDSPFYHKIWA ICGEGDIEEGISGEAASLAANQKLGNLTVIFDANRIQIEGDTNLVLAEDVLKRFQAYGWYTDEFSFIQPDGSYKEDIEGL ADVIAKAEKAAPDQPKLIKVHSLIAWPTPGKTNDPSSHGSKLGAEAVAGLKKLLGYDPEESFHVDEEALAHARKVADRGL EAHKAWDEKFDAWRKANPDKAALYDRLKAGELPEGFDKALDDLEATFEVGKNVATRGASGSVLNAIAAVMPELWGGSADL GGSNKTDLKGAATFAPAECATVQWPNCNEFGRQLHFGVREFAMGCITNGILLGSHTRPFGGTFFMFSDYERSAVRLAALM QIPNLYIWSHDSVAVGEDGPTHQPVEHLASFRAIPQLEVIRPADAFETAEAYRYFFEKKNTLPGAMILTRQGVPVLAETA AKAKEGVRKGAYVLVDTEGTPDVILMASGSEVQWAVAAAKTLAGEGVKARVVSVPSLEWFEEQDAEYKEAVLPAAVKARV SVEAGVAMPWYKYLGSYGKPVSIEQFGLQGDGAQNMIDLGITAEHVVEAAKASIAEAEAAK
Specific function: Unknown
COG id: COG0021
COG function: function code G; Transketolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transketolase family [H]
Homologues:
Organism=Homo sapiens, GI205277463, Length=611, Percent_Identity=25.3682487725041, Blast_Score=130, Evalue=6e-30, Organism=Homo sapiens, GI4507521, Length=611, Percent_Identity=25.3682487725041, Blast_Score=130, Evalue=6e-30, Organism=Homo sapiens, GI133778974, Length=279, Percent_Identity=28.673835125448, Blast_Score=91, Evalue=5e-18, Organism=Escherichia coli, GI1788808, Length=681, Percent_Identity=41.5565345080764, Blast_Score=488, Evalue=1e-139, Organism=Escherichia coli, GI48994911, Length=678, Percent_Identity=40.7079646017699, Blast_Score=479, Evalue=1e-136, Organism=Caenorhabditis elegans, GI17539652, Length=617, Percent_Identity=26.0940032414911, Blast_Score=128, Evalue=8e-30, Organism=Saccharomyces cerevisiae, GI6325331, Length=700, Percent_Identity=41.2857142857143, Blast_Score=478, Evalue=1e-135, Organism=Saccharomyces cerevisiae, GI6319593, Length=700, Percent_Identity=39.5714285714286, Blast_Score=448, Evalue=1e-126, Organism=Drosophila melanogaster, GI45551847, Length=610, Percent_Identity=25.5737704918033, Blast_Score=121, Evalue=2e-27, Organism=Drosophila melanogaster, GI45550715, Length=610, Percent_Identity=25.5737704918033, Blast_Score=121, Evalue=2e-27, Organism=Drosophila melanogaster, GI24666278, Length=603, Percent_Identity=25.5389718076285, Blast_Score=117, Evalue=2e-26, Organism=Drosophila melanogaster, GI24645119, Length=567, Percent_Identity=25.9259259259259, Blast_Score=106, Evalue=6e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009014 - InterPro: IPR015941 - InterPro: IPR005475 - InterPro: IPR005478 - InterPro: IPR020826 - InterPro: IPR005476 - InterPro: IPR005474 [H]
Pfam domain/function: PF02779 Transket_pyr; PF02780 Transketolase_C; PF00456 Transketolase_N [H]
EC number: =2.2.1.1 [H]
Molecular weight: Translated: 75790; Mature: 75659
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: PS00802 TRANSKETOLASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEFKETELDERAIKMAKVLSADAVEKAGSGHPGSPVSLAPVAYTLYQHFIKHDPNDPNW CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC EGRDRFILSGGHASLTQYVQLYFSGYGVTLDDLKSFRGSAATRTPGHPEYGLTPGIEMTT CCCCEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC GPLGQGLASAIGFAYGERFQRGLLDPETPKEDSPFYHKIWAICGEGDIEEGISGEAASLA CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHEEHHHHCCCCCCCCCCCCCHHHHH ANQKLGNLTVIFDANRIQIEGDTNLVLAEDVLKRFQAYGWYTDEFSFIQPDGSYKEDIEG HCCCCCCEEEEEECCEEEECCCCCEEEHHHHHHHHHHCCCCCCCCCEECCCCCHHHHHHH LADVIAKAEKAAPDQPKLIKVHSLIAWPTPGKTNDPSSHGSKLGAEAVAGLKKLLGYDPE HHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC ESFHVDEEALAHARKVADRGLEAHKAWDEKFDAWRKANPDKAALYDRLKAGELPEGFDKA CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHH LDDLEATFEVGKNVATRGASGSVLNAIAAVMPELWGGSADLGGSNKTDLKGAATFAPAEC HHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC ATVQWPNCNEFGRQLHFGVREFAMGCITNGILLGSHTRPFGGTFFMFSDYERSAVRLAAL CEEECCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCEEEEEECCHHHHHHHHHH MQIPNLYIWSHDSVAVGEDGPTHQPVEHLASFRAIPQLEVIRPADAFETAEAYRYFFEKK HHCCCEEEECCCCEEECCCCCCCHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHC NTLPGAMILTRQGVPVLAETAAKAKEGVRKGAYVLVDTEGTPDVILMASGSEVQWAVAAA CCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEECCCCEEHHHHHH KTLAGEGVKARVVSVPSLEWFEEQDAEYKEAVLPAAVKARVSVEAGVAMPWYKYLGSYGK HHHHCCCCEEEEEECCCHHHHHHCCCHHHHHHHHHHHHHEEEECCCCCCHHHHHHCCCCC PVSIEQFGLQGDGAQNMIDLGITAEHVVEAAKASIAEAEAAK CCCHHHCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TEFKETELDERAIKMAKVLSADAVEKAGSGHPGSPVSLAPVAYTLYQHFIKHDPNDPNW CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC EGRDRFILSGGHASLTQYVQLYFSGYGVTLDDLKSFRGSAATRTPGHPEYGLTPGIEMTT CCCCEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC GPLGQGLASAIGFAYGERFQRGLLDPETPKEDSPFYHKIWAICGEGDIEEGISGEAASLA CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHEEHHHHCCCCCCCCCCCCCHHHHH ANQKLGNLTVIFDANRIQIEGDTNLVLAEDVLKRFQAYGWYTDEFSFIQPDGSYKEDIEG HCCCCCCEEEEEECCEEEECCCCCEEEHHHHHHHHHHCCCCCCCCCEECCCCCHHHHHHH LADVIAKAEKAAPDQPKLIKVHSLIAWPTPGKTNDPSSHGSKLGAEAVAGLKKLLGYDPE HHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC ESFHVDEEALAHARKVADRGLEAHKAWDEKFDAWRKANPDKAALYDRLKAGELPEGFDKA CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHH LDDLEATFEVGKNVATRGASGSVLNAIAAVMPELWGGSADLGGSNKTDLKGAATFAPAEC HHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC ATVQWPNCNEFGRQLHFGVREFAMGCITNGILLGSHTRPFGGTFFMFSDYERSAVRLAAL CEEECCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCEEEEEECCHHHHHHHHHH MQIPNLYIWSHDSVAVGEDGPTHQPVEHLASFRAIPQLEVIRPADAFETAEAYRYFFEKK HHCCCEEEECCCCEEECCCCCCCHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHC NTLPGAMILTRQGVPVLAETAAKAKEGVRKGAYVLVDTEGTPDVILMASGSEVQWAVAAA CCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEECCCCEEHHHHHH KTLAGEGVKARVVSVPSLEWFEEQDAEYKEAVLPAAVKARVSVEAGVAMPWYKYLGSYGK HHHHCCCCEEEEEECCCHHHHHHCCCHHHHHHHHHHHHHEEEECCCCCCHHHHHHCCCCC PVSIEQFGLQGDGAQNMIDLGITAEHVVEAAKASIAEAEAAK CCCHHHCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]