| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is tal [H]
Identifier: 213691977
GI number: 213691977
Start: 1282322
End: 1283425
Strand: Reverse
Name: tal [H]
Synonym: Blon_1095
Alternate gene names: 213691977
Gene position: 1283425-1282322 (Counterclockwise)
Preceding gene: 213691978
Following gene: 213691976
Centisome position: 45.31
GC content: 64.4
Gene sequence:
>1104_bases ATGACTGAAGCAACTCAGCGTACGTCCGACAACGGCGTTTCCATCTGGCTGGACGACCTGTCCCGCTCCCGCATCGAGTC CGGCTCCCTGCAGGACCTCATCGCCAACAAGAACGTGGTCGGCGTCACCACCAACCCGTCCATCTTCCAGAAGGCCCTGA GCCAGGTCGGCCCGTACGACGCTCAGCTCAAGGAGCTCGGCAAGGTTGACGTTGAGACCGCTGTCCGCGAGCTCACCACC ACCGATGTGCGCAACGCCACCGACATCTTCCGCGAGATCGCTGAGGCTACCGACTTCGTCGACGGCCGTGTCTCCATCGA GGTCGATCCCCGTCTGGCCCACGACACCGAGAACACCGCCAAGCAGGCTGTGGAACTCTGGGAGAAGGTCAACCGTCCGA ACGCCATGATCAAGATCCCGGCGACCCTCGAGGGCCTGCCGGCGATCACCGCCACCCTGGCCAAGGGCATCTCCGTGAAC GTCACCCTGATCTTCTCGCTCGAGCGTTACGAGCAGGTCATCGACGCCTTCATCGAGGGCATCGCCCAGGCTGACGCCAA CGGCCACGACCTGAAGCACATCGGCTCCGTCGCCTCCTTCTTCGTCTCCCGCGTGGACAGCGCCGTCGACAAGCTGCTGG AAGCCAACGGCTCCGACGAAGCCAAGGCCCTCGAGGGCAAGGCCGCCGTGGCCAACGCCCGTCTGGCCTACGAGCTCTTC GAGAAGAAGTTCGCCGAGGATCCGCGTTGGGCCGCCTTGGCCGCCAAGGGCGCCAAGGTCCAGCGTCCGCTGTGGGCCTC CACCGGCACCAAGAACGCCGCCTACTCCGACTGCAAGTACGTTGACGAGCTGGTCGCCAAGCACATCGTCAACACCATGC CGGAGAAGACCCTGAACGCTCTTGCCGACCACGGCAACGGCGCTCCGTCCATCGAGGGCACCTTCGAGGAGTCCCACGCC GTCATCAACAAGCTGGCTGAGCTGGGCATCAACCTCAAGGACGTCACCGACAAGCTGGAGGCCGACGGTGTCGCCGCCTT CATCAAGTCTTGGGATTCCGTGCTGGCCGACGTCCAGTCCGGCATCGACCGCGTGAACGCCTGA
Upstream 100 bases:
>100_bases TCATCGAAGGTCCGGGTCCGTCCGCCGTGCCGCAGACCCTGCAGATCGCAGGGGTATGCCCTACAGATTTGTTCCAATAG GGAATATAAGGAGAATAAAC
Downstream 100 bases:
>100_bases GCCGCGACGCCGGCGCGTGATTGACGTGCCGGATTGACGGTTCGATAAGCCCCGACCCCAACCGGTCGGGGCTTATGCGT ATCCTCTGCGAGGGTGCCCC
Product: transaldolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 367; Mature: 366
Protein sequence:
>367_residues MTEATQRTSDNGVSIWLDDLSRSRIESGSLQDLIANKNVVGVTTNPSIFQKALSQVGPYDAQLKELGKVDVETAVRELTT TDVRNATDIFREIAEATDFVDGRVSIEVDPRLAHDTENTAKQAVELWEKVNRPNAMIKIPATLEGLPAITATLAKGISVN VTLIFSLERYEQVIDAFIEGIAQADANGHDLKHIGSVASFFVSRVDSAVDKLLEANGSDEAKALEGKAAVANARLAYELF EKKFAEDPRWAALAAKGAKVQRPLWASTGTKNAAYSDCKYVDELVAKHIVNTMPEKTLNALADHGNGAPSIEGTFEESHA VINKLAELGINLKDVTDKLEADGVAAFIKSWDSVLADVQSGIDRVNA
Sequences:
>Translated_367_residues MTEATQRTSDNGVSIWLDDLSRSRIESGSLQDLIANKNVVGVTTNPSIFQKALSQVGPYDAQLKELGKVDVETAVRELTT TDVRNATDIFREIAEATDFVDGRVSIEVDPRLAHDTENTAKQAVELWEKVNRPNAMIKIPATLEGLPAITATLAKGISVN VTLIFSLERYEQVIDAFIEGIAQADANGHDLKHIGSVASFFVSRVDSAVDKLLEANGSDEAKALEGKAAVANARLAYELF EKKFAEDPRWAALAAKGAKVQRPLWASTGTKNAAYSDCKYVDELVAKHIVNTMPEKTLNALADHGNGAPSIEGTFEESHA VINKLAELGINLKDVTDKLEADGVAAFIKSWDSVLADVQSGIDRVNA >Mature_366_residues TEATQRTSDNGVSIWLDDLSRSRIESGSLQDLIANKNVVGVTTNPSIFQKALSQVGPYDAQLKELGKVDVETAVRELTTT DVRNATDIFREIAEATDFVDGRVSIEVDPRLAHDTENTAKQAVELWEKVNRPNAMIKIPATLEGLPAITATLAKGISVNV TLIFSLERYEQVIDAFIEGIAQADANGHDLKHIGSVASFFVSRVDSAVDKLLEANGSDEAKALEGKAAVANARLAYELFE KKFAEDPRWAALAAKGAKVQRPLWASTGTKNAAYSDCKYVDELVAKHIVNTMPEKTLNALADHGNGAPSIEGTFEESHAV INKLAELGINLKDVTDKLEADGVAAFIKSWDSVLADVQSGIDRVNA
Specific function: Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway [H]
COG id: COG0176
COG function: function code G; Transaldolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transaldolase family. Type 2 subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR001585 - InterPro: IPR004732 - InterPro: IPR018225 - InterPro: IPR014634 [H]
Pfam domain/function: PF00923 Transaldolase [H]
EC number: =2.2.1.2 [H]
Molecular weight: Translated: 39631; Mature: 39500
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: PS01054 TRANSALDOLASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEATQRTSDNGVSIWLDDLSRSRIESGSLQDLIANKNVVGVTTNPSIFQKALSQVGPYD CCCCCCCCCCCCCEEEHHHHHHHHHCCCCHHHHHHCCCEEEECCCHHHHHHHHHHCCCCH AQLKELGKVDVETAVRELTTTDVRNATDIFREIAEATDFVDGRVSIEVDPRLAHDTENTA HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHH KQAVELWEKVNRPNAMIKIPATLEGLPAITATLAKGISVNVTLIFSLERYEQVIDAFIEG HHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHCCCEEEEEEEEEHHHHHHHHHHHHHH IAQADANGHDLKHIGSVASFFVSRVDSAVDKLLEANGSDEAKALEGKAAVANARLAYELF HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHH EKKFAEDPRWAALAAKGAKVQRPLWASTGTKNAAYSDCKYVDELVAKHIVNTMPEKTLNA HHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHH LADHGNGAPSIEGTFEESHAVINKLAELGINLKDVTDKLEADGVAAFIKSWDSVLADVQS HHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIDRVNA HHHHCCC >Mature Secondary Structure TEATQRTSDNGVSIWLDDLSRSRIESGSLQDLIANKNVVGVTTNPSIFQKALSQVGPYD CCCCCCCCCCCCEEEHHHHHHHHHCCCCHHHHHHCCCEEEECCCHHHHHHHHHHCCCCH AQLKELGKVDVETAVRELTTTDVRNATDIFREIAEATDFVDGRVSIEVDPRLAHDTENTA HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHH KQAVELWEKVNRPNAMIKIPATLEGLPAITATLAKGISVNVTLIFSLERYEQVIDAFIEG HHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHCCCEEEEEEEEEHHHHHHHHHHHHHH IAQADANGHDLKHIGSVASFFVSRVDSAVDKLLEANGSDEAKALEGKAAVANARLAYELF HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHH EKKFAEDPRWAALAAKGAKVQRPLWASTGTKNAAYSDCKYVDELVAKHIVNTMPEKTLNA HHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHH LADHGNGAPSIEGTFEESHAVINKLAELGINLKDVTDKLEADGVAAFIKSWDSVLADVQS HHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIDRVNA HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA