| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691928
Identifier: 213691928
GI number: 213691928
Start: 1226364
End: 1227215
Strand: Direct
Name: 213691928
Synonym: Blon_1044
Alternate gene names: NA
Gene position: 1226364-1227215 (Clockwise)
Preceding gene: 213691927
Following gene: 213691929
Centisome position: 43.29
GC content: 69.13
Gene sequence:
>852_bases ATGACACACGCAAACGCAGTGAACCCGGCAACCAATCCGGCCGCCAATCCAGCTGCCGGCCCGAGCCATGCCGCGATGCC CCGCGCGCATGCGGCGGGACGCCGCAGGCCGTCCGTGTGGGCGGCGTTCCGCTGGGAGACGCGCAAGGCCGGCAACCTGT GGTACTGGATCGTGACCGTCTTGTTCGACGCGATCGGCATGTTCAACGGGTGGAGCCAGTACACCGGCTACCAGGCGGAG TTCGCCAGGCAGGGCGTGACCTGGGCCGCGATCTGGGGTCAGGCGATCCTCCTGCCGAGCATGGTGTTCATGCCGGTGCT TGTGGCCGCGTTCGCCGCGCAGGTCGAAGCCAACGAGCATCGAGGCCGCAACTGGCAGCGGCTGAACGCCGCCGGCACCG TGAACGCGGCGATCGCCGGCAAGATGCTGCACGGGCTCGCGGCTTCGGCGCTGACCGTCTTCGTGTTCGAGGCAGAGTTC ATCCTCGTCGGACGCTTCGCCGCCGGATTCGACCTCGCGCAGCTCGGCCCGTTCCTGCTGCGCGGTATCCCGCTGACCCT GTCGGTATGGGCGATCATGACGCTCACGCAGGCCGTGAGCGCGAAGGCCGAATCGTTCGCGGGCACGATGAGCGTGATGA TGGTCCTGACCATCGGCGGCTGCGCGCTGAGCCTGGCCGCCCCGGCCATCGCCGGGCCGTATCCGCTCGCCCTGATCACC AGCGCCTCCGCCGCCCGCGACCTCGCGAACATCGCCAGCCCGGCATCCATGCTCGCCTCCACGACCGCCGCCGCCATCTG GACCGCCATCAGCGCCCTGATCTTCCACCGGCTCGCCAAACAAGCCGTCTGA
Upstream 100 bases:
>100_bases TCGCCGCGCGCCCGTGGATGGCCGTGGCCTCCGCGGCCATGGCGTTCCTCGGCTGGACGCTGGTCAGCATGGTCGTGGTC AAGGTGAAGGAGTCAAGACG
Downstream 100 bases:
>100_bases GCAACCGTCCACGGGCTCCCCTCACCTGCGGGAGCCCGCCACCCAACACCATGGAAAGGCTTCATCATGCACACCACCAG CCAACACAACGAACGACACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 283; Mature: 282
Protein sequence:
>283_residues MTHANAVNPATNPAANPAAGPSHAAMPRAHAAGRRRPSVWAAFRWETRKAGNLWYWIVTVLFDAIGMFNGWSQYTGYQAE FARQGVTWAAIWGQAILLPSMVFMPVLVAAFAAQVEANEHRGRNWQRLNAAGTVNAAIAGKMLHGLAASALTVFVFEAEF ILVGRFAAGFDLAQLGPFLLRGIPLTLSVWAIMTLTQAVSAKAESFAGTMSVMMVLTIGGCALSLAAPAIAGPYPLALIT SASAARDLANIASPASMLASTTAAAIWTAISALIFHRLAKQAV
Sequences:
>Translated_283_residues MTHANAVNPATNPAANPAAGPSHAAMPRAHAAGRRRPSVWAAFRWETRKAGNLWYWIVTVLFDAIGMFNGWSQYTGYQAE FARQGVTWAAIWGQAILLPSMVFMPVLVAAFAAQVEANEHRGRNWQRLNAAGTVNAAIAGKMLHGLAASALTVFVFEAEF ILVGRFAAGFDLAQLGPFLLRGIPLTLSVWAIMTLTQAVSAKAESFAGTMSVMMVLTIGGCALSLAAPAIAGPYPLALIT SASAARDLANIASPASMLASTTAAAIWTAISALIFHRLAKQAV >Mature_282_residues THANAVNPATNPAANPAAGPSHAAMPRAHAAGRRRPSVWAAFRWETRKAGNLWYWIVTVLFDAIGMFNGWSQYTGYQAEF ARQGVTWAAIWGQAILLPSMVFMPVLVAAFAAQVEANEHRGRNWQRLNAAGTVNAAIAGKMLHGLAASALTVFVFEAEFI LVGRFAAGFDLAQLGPFLLRGIPLTLSVWAIMTLTQAVSAKAESFAGTMSVMMVLTIGGCALSLAAPAIAGPYPLALITS ASAARDLANIASPASMLASTTAAAIWTAISALIFHRLAKQAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29834; Mature: 29703
Theoretical pI: Translated: 10.89; Mature: 10.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHANAVNPATNPAANPAAGPSHAAMPRAHAAGRRRPSVWAAFRWETRKAGNLWYWIVTV CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHH LFDAIGMFNGWSQYTGYQAEFARQGVTWAAIWGQAILLPSMVFMPVLVAAFAAQVEANEH HHHHHHHCCCHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH RGRNWQRLNAAGTVNAAIAGKMLHGLAASALTVFVFEAEFILVGRFAAGFDLAQLGPFLL CCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHEECCEEEEEHHHCCCCHHHHHHHHH RGIPLTLSVWAIMTLTQAVSAKAESFAGTMSVMMVLTIGGCALSLAAPAIAGPYPLALIT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHC SASAARDLANIASPASMLASTTAAAIWTAISALIFHRLAKQAV CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure THANAVNPATNPAANPAAGPSHAAMPRAHAAGRRRPSVWAAFRWETRKAGNLWYWIVTV CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHH LFDAIGMFNGWSQYTGYQAEFARQGVTWAAIWGQAILLPSMVFMPVLVAAFAAQVEANEH HHHHHHHCCCHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH RGRNWQRLNAAGTVNAAIAGKMLHGLAASALTVFVFEAEFILVGRFAAGFDLAQLGPFLL CCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHEECCEEEEEHHHCCCCHHHHHHHHH RGIPLTLSVWAIMTLTQAVSAKAESFAGTMSVMMVLTIGGCALSLAAPAIAGPYPLALIT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHC SASAARDLANIASPASMLASTTAAAIWTAISALIFHRLAKQAV CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA