| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691924
Identifier: 213691924
GI number: 213691924
Start: 1221406
End: 1221945
Strand: Reverse
Name: 213691924
Synonym: Blon_1038
Alternate gene names: NA
Gene position: 1221945-1221406 (Counterclockwise)
Preceding gene: 213691925
Following gene: 213691922
Centisome position: 43.14
GC content: 51.48
Gene sequence:
>540_bases ATGGCTCGTCTTATGAAATCGGCACGTGGAATACTTGCCCTAGTAGTCTCGTTCTCCTTAGCACTAGTTTTGGGACTCGT GCCGATGACATCAGCAAATGCGGCAGAGATCGCAATCAGCGGAATGCCAAAAGAGTCCATACCTGCGGCATTCGGAGGAG AGCTTCACGGCGAAAATACCTCGACCGTCGAAGTGGATGGTAAAGGTACGTTGACCGCAACAATCAACTACGACACAGGA GTCGTTACGGTCAAGGATTTCAATGGTGCTGTTCGCACTGAATCCCTAGCTGCGGTAGTCGCCAATGCAGCAAATGAGCT TGAGAAAATTCCTGCGGAACAACGTCAGGAACTTATGAACAGGGCACAGTTGAGGATTACGCCGCATGATGTATGCCCGT ATCTTGTCACCGCCATAGGATTTGGTCATGACGCAGCATGGCAAGCCGCATTGAGCCTTGTCGGGGTGAATCCTGCCATC GCTGTGTTGGTGGGTCTTGGTTTTGCGTTCTTCTGGGCGTGGGTTTCAAGTCACTGCTGA
Upstream 100 bases:
>100_bases CTGTTGATGATATACTCTTTTACTAGACAAGCGATTTTCTACTTGCCTACCAAATAGTGGGTATACCGCCTACCAAGGCA ATGAAGCATCGGAGGCATCA
Downstream 100 bases:
>100_bases ACAGGTTTTTATTCATGCGAAGGTAAATCATGAAGTTAGTTAATTTCCTGCCTTTCCTAGGGGGACTCGTCGCCTACTTG TTGGTGTGGTGTAAATGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MARLMKSARGILALVVSFSLALVLGLVPMTSANAAEIAISGMPKESIPAAFGGELHGENTSTVEVDGKGTLTATINYDTG VVTVKDFNGAVRTESLAAVVANAANELEKIPAEQRQELMNRAQLRITPHDVCPYLVTAIGFGHDAAWQAALSLVGVNPAI AVLVGLGFAFFWAWVSSHC
Sequences:
>Translated_179_residues MARLMKSARGILALVVSFSLALVLGLVPMTSANAAEIAISGMPKESIPAAFGGELHGENTSTVEVDGKGTLTATINYDTG VVTVKDFNGAVRTESLAAVVANAANELEKIPAEQRQELMNRAQLRITPHDVCPYLVTAIGFGHDAAWQAALSLVGVNPAI AVLVGLGFAFFWAWVSSHC >Mature_178_residues ARLMKSARGILALVVSFSLALVLGLVPMTSANAAEIAISGMPKESIPAAFGGELHGENTSTVEVDGKGTLTATINYDTGV VTVKDFNGAVRTESLAAVVANAANELEKIPAEQRQELMNRAQLRITPHDVCPYLVTAIGFGHDAAWQAALSLVGVNPAIA VLVGLGFAFFWAWVSSHC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18749; Mature: 18618
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARLMKSARGILALVVSFSLALVLGLVPMTSANAAEIAISGMPKESIPAAFGGELHGENT CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHCCHHCCCCCCCCCC STVEVDGKGTLTATINYDTGVVTVKDFNGAVRTESLAAVVANAANELEKIPAEQRQELMN CEEEECCCCEEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH RAQLRITPHDVCPYLVTAIGFGHDAAWQAALSLVGVNPAIAVLVGLGFAFFWAWVSSHC HHHEEECHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ARLMKSARGILALVVSFSLALVLGLVPMTSANAAEIAISGMPKESIPAAFGGELHGENT HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHCCHHCCCCCCCCCC STVEVDGKGTLTATINYDTGVVTVKDFNGAVRTESLAAVVANAANELEKIPAEQRQELMN CEEEECCCCEEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH RAQLRITPHDVCPYLVTAIGFGHDAAWQAALSLVGVNPAIAVLVGLGFAFFWAWVSSHC HHHEEECHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA