| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691888
Identifier: 213691888
GI number: 213691888
Start: 1185465
End: 1186208
Strand: Direct
Name: 213691888
Synonym: Blon_1000
Alternate gene names: NA
Gene position: 1185465-1186208 (Clockwise)
Preceding gene: 213691887
Following gene: 213691889
Centisome position: 41.85
GC content: 45.97
Gene sequence:
>744_bases ATGATCAATTATATAGCCTCTGAATACCTGAAACATAAAGGTACTTTCGTTAGGAAAATAGCATGGATAGCCCCTATGCT AACGGTATGTCTTAATGTGCTTGCTCCTATGTGGTATCAGCAGAATTCATATAACTGGTGGTATGTGTTCTTGTATCCCG GTTGCGTGACGCTATTATCAATCCTGATAATTCAAAGAGATGGCGGCAAATTACAGTTTAGGGCCATATTGTCGTTACCT GTCGACCTAGAGCGGGTATGGTATGCAAAGATAATCACCTGCATACTTTATGCGGCACTCGCCAATGCAATTCTGATGTT GTGCAATATTGCAGGTGGTTTCATTATTCAACGCATCTTCGGCATACCCATGACGATCAGACCGATGCAGGCATTGTTCG GAACGCTCTGCATCATTTTGGCAAGTGCATGGAATATACCGCTATGCTTATGGCTGACCAAGAAGGTGGGTGTATTCGCC ACTCTCATATTGAATGTCGGAATGAGCCTGACGCTGGGGATATTGGGGGCGGACACAGGCCTTTGGTTCCTGTTCCCCTA TAGTTGGGTTGATCGCCTTATGGTTCCCGCATTGGGAATATTGCCGAATGGGGCATCAGTACAAGGAAGTACCCTGTCGA CTCCCTTACTGTTGGTCATCGCGGTACTGTGCCTGTCGGTGTTTCTACTATATGGCCTTGCGAAGTCAACGGCAAGATCC TTTATCAATCAGGAGGTTCTTTGA
Upstream 100 bases:
>100_bases TCAAATGGTGTTTTGGGATATGAAGGACCAATGAATAAGGATCAGAACTTGGAAGAACTATTTGTCGAGGTTGTAAGGAA ATCACAGGAAGAACGATAGT
Downstream 100 bases:
>100_bases TGTCGGGTATTATCAGATGTCTTCAAGCGGAATGGCTTAAAAGCAGGCATACGCCATTACTTCTGATCCATGTTCTCTTC CCTGTGATCGGGGCCTGTGT
Product: bacteriocin ABC transporter, permease protein subunit
Products: NA
Alternate protein names: Bacteriocin ABC Transporter Permease Protein Subunit; Permease; Lantibiotic ABC Transporter Permease Protein; Lantibiotic ABC Transporter Permease; Transporter Protein; Bacteriocin ABC Transporter Permease Subunit; Bacteriocin Abc Transporter Permease Subunit; Antibiotic ABC Transporter; Lantibiotic PermeaE/MutE; Mutacin ABC Transporter Protein MutE; Subtilin ABC Transporter Permease; Antibiotic Permease Protein SpaE/MutE
Number of amino acids: Translated: 247; Mature: 247
Protein sequence:
>247_residues MINYIASEYLKHKGTFVRKIAWIAPMLTVCLNVLAPMWYQQNSYNWWYVFLYPGCVTLLSILIIQRDGGKLQFRAILSLP VDLERVWYAKIITCILYAALANAILMLCNIAGGFIIQRIFGIPMTIRPMQALFGTLCIILASAWNIPLCLWLTKKVGVFA TLILNVGMSLTLGILGADTGLWFLFPYSWVDRLMVPALGILPNGASVQGSTLSTPLLLVIAVLCLSVFLLYGLAKSTARS FINQEVL
Sequences:
>Translated_247_residues MINYIASEYLKHKGTFVRKIAWIAPMLTVCLNVLAPMWYQQNSYNWWYVFLYPGCVTLLSILIIQRDGGKLQFRAILSLP VDLERVWYAKIITCILYAALANAILMLCNIAGGFIIQRIFGIPMTIRPMQALFGTLCIILASAWNIPLCLWLTKKVGVFA TLILNVGMSLTLGILGADTGLWFLFPYSWVDRLMVPALGILPNGASVQGSTLSTPLLLVIAVLCLSVFLLYGLAKSTARS FINQEVL >Mature_247_residues MINYIASEYLKHKGTFVRKIAWIAPMLTVCLNVLAPMWYQQNSYNWWYVFLYPGCVTLLSILIIQRDGGKLQFRAILSLP VDLERVWYAKIITCILYAALANAILMLCNIAGGFIIQRIFGIPMTIRPMQALFGTLCIILASAWNIPLCLWLTKKVGVFA TLILNVGMSLTLGILGADTGLWFLFPYSWVDRLMVPALGILPNGASVQGSTLSTPLLLVIAVLCLSVFLLYGLAKSTARS FINQEVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27500; Mature: 27500
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINYIASEYLKHKGTFVRKIAWIAPMLTVCLNVLAPMWYQQNSYNWWYVFLYPGCVTLLS CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEEHHHHHHHHH ILIIQRDGGKLQFRAILSLPVDLERVWYAKIITCILYAALANAILMLCNIAGGFIIQRIF HHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIPMTIRPMQALFGTLCIILASAWNIPLCLWLTKKVGVFATLILNVGMSLTLGILGADTG CCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHEECCCC LWFLFPYSWVDRLMVPALGILPNGASVQGSTLSTPLLLVIAVLCLSVFLLYGLAKSTARS EEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FINQEVL HHHHCCC >Mature Secondary Structure MINYIASEYLKHKGTFVRKIAWIAPMLTVCLNVLAPMWYQQNSYNWWYVFLYPGCVTLLS CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEEHHHHHHHHH ILIIQRDGGKLQFRAILSLPVDLERVWYAKIITCILYAALANAILMLCNIAGGFIIQRIF HHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIPMTIRPMQALFGTLCIILASAWNIPLCLWLTKKVGVFATLILNVGMSLTLGILGADTG CCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHEECCCC LWFLFPYSWVDRLMVPALGILPNGASVQGSTLSTPLLLVIAVLCLSVFLLYGLAKSTARS EEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FINQEVL HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA